BLASTX nr result

ID: Coptis23_contig00005397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005397
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-...   583   e-164
ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-...   573   e-161
ref|XP_002327406.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-...   572   e-160
ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-...   566   e-159

>ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Vitis
            vinifera] gi|297743555|emb|CBI36422.3| unnamed protein
            product [Vitis vinifera]
          Length = 455

 Score =  583 bits (1503), Expect = e-164
 Identities = 298/386 (77%), Positives = 318/386 (82%)
 Frame = +2

Query: 290  RSFTVAATTTESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 469
            R   VAA TT+S  SD LTKIPPD RIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE
Sbjct: 68   RFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 127

Query: 470  NEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDHIVIE 649
            NE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI+ELVNKKKGKFDHIVIE
Sbjct: 128  NEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIE 187

Query: 650  TTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVEQIAY 829
            TTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLDEVKPKG+VNEAVEQIAY
Sbjct: 188  TTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAY 247

Query: 830  ADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLERIESV 1009
            ADRIIVNK DLVGE EI SLVQRIK+IN++A LKR  FG VDLDYVLG+GGFDLERIES 
Sbjct: 248  ADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDLDYVLGVGGFDLERIESA 307

Query: 1010 VTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGVTSVSVVCEG 1189
            V  E  K                                         PGV+SVS+VCEG
Sbjct: 308  VNSEGVKEDHATHSHDHDHDHDHHDHHHHEHDHRHEHNDHHSHDHTHDPGVSSVSIVCEG 367

Query: 1190 SLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWGPDEL 1369
            SLDLEKAN+WLGTLL+ERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WGPDE 
Sbjct: 368  SLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEP 427

Query: 1370 RINKIVFIGKNLDAEALEKGFKSCLL 1447
            R+NKIVFIGKNLD + LEKGFK+CLL
Sbjct: 428  RVNKIVFIGKNLDGKELEKGFKACLL 453


>ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
            gi|449513465|ref|XP_004164332.1| PREDICTED: COBW
            domain-containing protein 2-like [Cucumis sativus]
          Length = 451

 Score =  573 bits (1477), Expect = e-161
 Identities = 302/402 (75%), Positives = 324/402 (80%), Gaps = 5/402 (1%)
 Frame = +2

Query: 257  PLLQVTNKTSIRSFTVAAT---TTESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLNH 427
            P LQ + +TS R    A+T   T+ES  S+ LTKIPPD+RIPATIITGFLGSGKTTLLNH
Sbjct: 50   PALQ-SKRTSPRFSVFASTATPTSESDESEVLTKIPPDNRIPATIITGFLGSGKTTLLNH 108

Query: 428  ILTADHGKRIAVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAEL 607
            ILTADHGKRIAVIENEFGEVDIDGSLVA+KTTGAEDIVMLNNGCLCCTVRGDLVRMI+EL
Sbjct: 109  ILTADHGKRIAVIENEFGEVDIDGSLVAAKTTGAEDIVMLNNGCLCCTVRGDLVRMISEL 168

Query: 608  VNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVK 787
            VNKKKGKFDHIVIETTGLANP+PIIQTFYAED VFNDVKLDGV+TLVDAKHAT HLDEVK
Sbjct: 169  VNKKKGKFDHIVIETTGLANPSPIIQTFYAEDSVFNDVKLDGVVTLVDAKHATFHLDEVK 228

Query: 788  PKGIVNEAVEQIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYV 967
            P+G+VNEAVEQIAYADRIIVNKTDLVGE +I  LVQRIK IN+MA LKR  +G VDLDYV
Sbjct: 229  PEGVVNEAVEQIAYADRIIVNKTDLVGEPQIADLVQRIKKINRMAELKRTKYGKVDLDYV 288

Query: 968  LGIGGFDLERIESVVTDESSK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1141
            LGIGGFDLERI+S V  ES +                                       
Sbjct: 289  LGIGGFDLERIDSSVDTESREDHAHSHHEDHKHSHDHDHDHHHHDHDHEHDHKHDHHSHD 348

Query: 1142 XXXXPGVTSVSVVCEGSLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVH 1321
                PGV+SVS+VCEG LDLEKANMWLGTLL++ SDDIYRMKGLLSVQGM ERFVFQGVH
Sbjct: 349  HTHDPGVSSVSIVCEGILDLEKANMWLGTLLLDHSDDIYRMKGLLSVQGMDERFVFQGVH 408

Query: 1322 DIFQGSPDRPWGPDELRINKIVFIGKNLDAEALEKGFKSCLL 1447
            DIFQGSPDR WGPDE RINKIVFIGKNLD E LEKGFK+CLL
Sbjct: 409  DIFQGSPDRLWGPDEPRINKIVFIGKNLDGEELEKGFKACLL 450


>ref|XP_002327406.1| predicted protein [Populus trichocarpa] gi|222835960|gb|EEE74381.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  573 bits (1477), Expect = e-161
 Identities = 296/390 (75%), Positives = 321/390 (82%), Gaps = 4/390 (1%)
 Frame = +2

Query: 290  RSFTVAATTTESG----SSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRI 457
            R F+V+AT T S      SD  TKIPPD+RIPATIITGFLGSGKTTLLNHILTADHGKRI
Sbjct: 2    RRFSVSATATTSAPQTDDSDLTTKIPPDNRIPATIITGFLGSGKTTLLNHILTADHGKRI 61

Query: 458  AVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDH 637
            AVIENE+GEVDIDGSLVA+KT GAEDI+MLNNGCLCCTVRGDLVRMIA+LV +KK KFDH
Sbjct: 62   AVIENEYGEVDIDGSLVAAKTAGAEDIIMLNNGCLCCTVRGDLVRMIADLVKRKKDKFDH 121

Query: 638  IVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVE 817
            IVIETTGLANPAPIIQTFYAEDQVFNDVKLDGV+TLVDAKHA LHLDEVKPKG+VNEAVE
Sbjct: 122  IVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVVTLVDAKHAPLHLDEVKPKGVVNEAVE 181

Query: 818  QIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLER 997
            QIAYADR+I+NKTDLVGE+EI SLVQRI++IN+MA+LKR  +G VDLDYVLGIGGFDLER
Sbjct: 182  QIAYADRVILNKTDLVGEQEIASLVQRIRNINRMANLKRTQYGKVDLDYVLGIGGFDLER 241

Query: 998  IESVVTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGVTSVSV 1177
            IES V+DE  K                                         PGV+SVS+
Sbjct: 242  IESAVSDEDRK--EDHASHDHDHDHHHHHHHDEHDHEHDHHDDHHSHDHTHDPGVSSVSI 299

Query: 1178 VCEGSLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWG 1357
            VCEGSLDLEKAN WLGTLLMERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WG
Sbjct: 300  VCEGSLDLEKANFWLGTLLMERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWG 359

Query: 1358 PDELRINKIVFIGKNLDAEALEKGFKSCLL 1447
            P+E R NKIVFIGKNLDA+ LEKGFK+CLL
Sbjct: 360  PNEPRTNKIVFIGKNLDAQELEKGFKACLL 389


>ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Vitis
            vinifera]
          Length = 437

 Score =  572 bits (1473), Expect = e-160
 Identities = 294/386 (76%), Positives = 317/386 (82%)
 Frame = +2

Query: 290  RSFTVAATTTESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 469
            R   VAA TT+S  SD LTKIPPD RIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE
Sbjct: 68   RFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 127

Query: 470  NEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDHIVIE 649
            NE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI+ELVNKKKGKFDHIVIE
Sbjct: 128  NEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIE 187

Query: 650  TTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVEQIAY 829
            TTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLDEVKPKG+VNEAVEQIAY
Sbjct: 188  TTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAY 247

Query: 830  ADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLERIESV 1009
            ADRIIVNK DLVGE EI SLVQRIK+IN++A LKR  FG VDLDYVLG+GGFDLERI+S 
Sbjct: 248  ADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDLDYVLGVGGFDLERIKSR 307

Query: 1010 VTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGVTSVSVVCEG 1189
               +  +                                         PGV+SVS+VCEG
Sbjct: 308  FFQDHER------------------CLVGHMHANAEHNDHHSHDHTHDPGVSSVSIVCEG 349

Query: 1190 SLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWGPDEL 1369
            SLDLEKAN+WLGTLL+ERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WGPDE 
Sbjct: 350  SLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEP 409

Query: 1370 RINKIVFIGKNLDAEALEKGFKSCLL 1447
            R+NKIVFIGKNLD + LEKGFK+CLL
Sbjct: 410  RVNKIVFIGKNLDGKELEKGFKACLL 435


>ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-like isoform 3 [Vitis
            vinifera]
          Length = 426

 Score =  566 bits (1459), Expect = e-159
 Identities = 292/386 (75%), Positives = 313/386 (81%)
 Frame = +2

Query: 290  RSFTVAATTTESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 469
            R   VAA TT+S  SD LTKIPPD RIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE
Sbjct: 68   RFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 127

Query: 470  NEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDHIVIE 649
            NE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI+ELVNKKKGKFDHIVIE
Sbjct: 128  NEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIE 187

Query: 650  TTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVEQIAY 829
            TTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLDEVKPKG+VNEAVEQIAY
Sbjct: 188  TTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAY 247

Query: 830  ADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLERIESV 1009
            ADRIIVNK DLVGE EI SLVQRIK+IN++A LKR  FG VDLDYVLG+GGFDLER+   
Sbjct: 248  ADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDLDYVLGVGGFDLERL--- 304

Query: 1010 VTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGVTSVSVVCEG 1189
                                                            PGV+SVS+VCEG
Sbjct: 305  --------------------------FLYLLFFTYHHNDHHSHDHTHDPGVSSVSIVCEG 338

Query: 1190 SLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWGPDEL 1369
            SLDLEKAN+WLGTLL+ERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WGPDE 
Sbjct: 339  SLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEP 398

Query: 1370 RINKIVFIGKNLDAEALEKGFKSCLL 1447
            R+NKIVFIGKNLD + LEKGFK+CLL
Sbjct: 399  RVNKIVFIGKNLDGKELEKGFKACLL 424


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