BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005394
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [S...    73   9e-13
ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis...    71   1e-12
ref|XP_004148381.1| PREDICTED: 60S ribosomal protein L7-1-like [...    69   4e-12
gb|AFK36097.1| unknown [Lotus japonicus]                               70   5e-12
ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [...    69   1e-11

>gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [Solanum tuberosum]
          Length = 246

 Score = 72.8 bits (177), Expect(3) = 9e-13
 Identities = 32/45 (71%), Positives = 41/45 (91%)
 Frame = -2

Query: 212 LTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKG 78
           L ++FSGVFVKANE  +++L+ VEPFVTYGYPNLKSVK+L++KKG
Sbjct: 112 LRKIFSGVFVKANERTVEILQKVEPFVTYGYPNLKSVKDLIYKKG 156



 Score = 23.1 bits (48), Expect(3) = 9e-13
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 102 QGVGIQEGIIVPLTDNKIIEQRL 34
           +G G  +   VPLT N I+EQ L
Sbjct: 155 KGSGKTDNQRVPLTSNDIVEQTL 177



 Score = 21.6 bits (44), Expect(3) = 9e-13
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 40  EIVTACPHFKDVT 2
           EI +  PHFK+VT
Sbjct: 191 EIASVGPHFKEVT 203


>ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis vinifera]
           gi|297745096|emb|CBI38935.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score = 70.9 bits (172), Expect(2) = 1e-12
 Identities = 29/45 (64%), Positives = 40/45 (88%)
 Frame = -2

Query: 212 LTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKG 78
           L ++F GV VKANEG+++ML+ VEP+V YGYPNLK+V+EL++KKG
Sbjct: 112 LRKIFDGVLVKANEGILEMLQKVEPYVAYGYPNLKNVRELIYKKG 156



 Score = 26.9 bits (58), Expect(2) = 1e-12
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -1

Query: 84  EGIIVPLTDNKIIEQRL 34
           EG  VPLTDN IIEQ L
Sbjct: 161 EGQKVPLTDNNIIEQAL 177


>ref|XP_004148381.1| PREDICTED: 60S ribosomal protein L7-1-like [Cucumis sativus]
          Length = 183

 Score = 69.3 bits (168), Expect(2) = 4e-12
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = -2

Query: 212 LTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKG 78
           L+R+FS VF KANE ++  L+ VEP+VTYGYPNLK+V+ELV+KKG
Sbjct: 114 LSRIFSAVFAKANESILGKLQRVEPYVTYGYPNLKNVRELVYKKG 158



 Score = 26.6 bits (57), Expect(2) = 4e-12
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 72  VPLTDNKIIEQRLLRP 25
           VPLTDN IIEQ L +P
Sbjct: 167 VPLTDNNIIEQVLEKP 182


>gb|AFK36097.1| unknown [Lotus japonicus]
          Length = 245

 Score = 70.1 bits (170), Expect(2) = 5e-12
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -2

Query: 212 LTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKG 78
           L ++FS VFVK +EG+M  L+ VEPFVTYGYPNLKS+KEL++KKG
Sbjct: 111 LRKIFSAVFVKPSEGIMAKLQRVEPFVTYGYPNLKSIKELLYKKG 155



 Score = 25.4 bits (54), Expect(2) = 5e-12
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -1

Query: 72  VPLTDNKIIEQRL 34
           VPLTDN IIEQ L
Sbjct: 164 VPLTDNNIIEQEL 176


>ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [Cucumis sativus]
           gi|449530031|ref|XP_004172000.1| PREDICTED: 60S
           ribosomal protein L7-1-like [Cucumis sativus]
           gi|449532976|ref|XP_004173453.1| PREDICTED: 60S
           ribosomal protein L7-1-like [Cucumis sativus]
          Length = 249

 Score = 68.9 bits (167), Expect(2) = 1e-11
 Identities = 29/45 (64%), Positives = 39/45 (86%)
 Frame = -2

Query: 212 LTRVFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKG 78
           L+R+FS VF KANE ++  L+ VEP+VTYGYPNLK+V+EL++KKG
Sbjct: 114 LSRIFSAVFAKANESILGKLQRVEPYVTYGYPNLKNVRELIYKKG 158



 Score = 25.0 bits (53), Expect(2) = 1e-11
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -1

Query: 72  VPLTDNKIIEQRL 34
           VPLTDN IIEQ L
Sbjct: 167 VPLTDNNIIEQAL 179