BLASTX nr result

ID: Coptis23_contig00005390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005390
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329900.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002303525.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003549876.1| PREDICTED: FAM10 family protein At4g22670-li...    94   2e-17
gb|ACU22671.1| unknown [Glycine max]                                   94   2e-17
ref|NP_567663.1| HSP70-interacting protein 1 [Arabidopsis thalia...    92   3e-17

>ref|XP_002329900.1| predicted protein [Populus trichocarpa] gi|222871137|gb|EEF08268.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/97 (51%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 290 CKSNPSILKDPSLSFFQDYLHSLGAKIPGESPRPPYP-ETXXXXXXXXXXXXXXXXXXQG 114
           CKS+PSIL DPSL FF+DYL SLGAK+P  + +  Y  E                   + 
Sbjct: 16  CKSSPSILADPSLFFFRDYLESLGAKLPASARKKSYVVEESDEEMEEKEESQVEPQVEEE 75

Query: 113 YENEELVESDIELEGHVVEPDNDPPQKMGDCSIEVTE 3
            E EE++ESD+ELEG  V+PDNDPPQKMGD S+EVT+
Sbjct: 76  EEEEEIIESDLELEGDTVDPDNDPPQKMGDPSVEVTD 112


>ref|XP_002303525.1| predicted protein [Populus trichocarpa] gi|222840957|gb|EEE78504.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/101 (51%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = -1

Query: 290 CKSNPSILKDPSLSFFQDYLHSLGAKIPG-----ESPRPPYPETXXXXXXXXXXXXXXXX 126
           CKSNPSIL DPSLSFF DYL SLGAK+P      +  +                      
Sbjct: 17  CKSNPSILADPSLSFFHDYLESLGAKLPACAHKHDDSKSKSYVVEESDEEMEKEESQGEP 76

Query: 125 XXQGYENEELVESDIELEGHVVEPDNDPPQKMGDCSIEVTE 3
             +  E EE++ESD+ELEG  VEPDNDPPQKMGD S+EVTE
Sbjct: 77  EVEEEEEEEIIESDVELEGETVEPDNDPPQKMGDPSVEVTE 117


>ref|XP_003549876.1| PREDICTED: FAM10 family protein At4g22670-like [Glycine max]
          Length = 403

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
 Frame = -1

Query: 290 CKSNPSILKDPSLSFFQDYLHSLGAKIPGESPRPPYPETXXXXXXXXXXXXXXXXXXQGY 111
           CKSNPS+L DPSLSFF+DYL SLGAK+P  +    Y E+                     
Sbjct: 16  CKSNPSLLADPSLSFFRDYLQSLGAKLPESA----YSESTGVERDEDIEDLTEEHEKVEE 71

Query: 110 ENEE----LVESDIELEGHVVEPDNDPPQKMGDCSIEVTE 3
           E EE    ++ESD+ELEG   EPD+DPPQKMGD S+EVTE
Sbjct: 72  EEEEEDDVIIESDVELEGETCEPDDDPPQKMGDPSVEVTE 111


>gb|ACU22671.1| unknown [Glycine max]
          Length = 315

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
 Frame = -1

Query: 290 CKSNPSILKDPSLSFFQDYLHSLGAKIPGESPRPPYPETXXXXXXXXXXXXXXXXXXQGY 111
           CKSNPS+L DPSLSFF+DYL SLGAK+P  +    Y E+                     
Sbjct: 16  CKSNPSLLADPSLSFFRDYLQSLGAKLPESA----YSESTGVERDEDIEDLTEEHEKVEE 71

Query: 110 ENEE----LVESDIELEGHVVEPDNDPPQKMGDCSIEVTE 3
           E EE    ++ESD+ELEG   EPD+DPPQKMGD S+EVTE
Sbjct: 72  EEEEEDDVIIESDVELEGETCEPDDDPPQKMGDPSVEVTE 111


>ref|NP_567663.1| HSP70-interacting protein 1 [Arabidopsis thaliana]
           gi|75331763|sp|Q93YR3.1|F10AL_ARATH RecName: Full=FAM10
           family protein At4g22670 gi|16648867|gb|AAL24285.1| HSP
           associated protein like [Arabidopsis thaliana]
           gi|21593067|gb|AAM65016.1| HSP associated protein like
           [Arabidopsis thaliana] gi|28058906|gb|AAO29967.1| HSP
           associated protein like [Arabidopsis thaliana]
           gi|332659238|gb|AEE84638.1| HSP70-interacting protein 1
           [Arabidopsis thaliana]
          Length = 441

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 52/102 (50%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
 Frame = -1

Query: 290 CKSNPSILKDPSLSFFQDYLHSLGAKIP---GESPRPPYPETXXXXXXXXXXXXXXXXXX 120
           CKS+PS+L  PSLSFF+DYL SLGAKIP    E  +   P +                  
Sbjct: 16  CKSDPSLLTTPSLSFFRDYLESLGAKIPTGVHEEDKDTKPRSFVVEESDDDMDETEEVKP 75

Query: 119 QGYENE---ELVESDIELEGHVVEPDNDPPQKMGDCSIEVTE 3
           +  E E   E+VESD+ELEG  VEPDNDPPQKMGD S+EVT+
Sbjct: 76  KVEEEEEEDEIVESDVELEGDTVEPDNDPPQKMGDSSVEVTD 117


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