BLASTX nr result

ID: Coptis23_contig00005387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005387
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18365.3| unnamed protein product [Vitis vinifera]              183   7e-44
ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241...   183   7e-44
ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arab...   179   9e-43
dbj|BAJ33667.1| unnamed protein product [Thellungiella halophila]     179   2e-42

>emb|CBI18365.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score =  183 bits (465), Expect = 7e-44
 Identities = 88/117 (75%), Positives = 103/117 (88%)
 Frame = -3

Query: 1192 AFALSNGMYSSPAVRIYTAENVEEELQEAQRDFIRAAVGISNKGRLLVPKMLHSFARGII 1013
            AFALS GMYSSP++RIYTA+ V EELQEAQRDFIRA+VG+S+KGRLLVPKMLH FA+G +
Sbjct: 512  AFALSCGMYSSPSIRIYTAKKVREELQEAQRDFIRASVGLSSKGRLLVPKMLHCFAKGFV 571

Query: 1012 EDSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFDSRFRYLFLPD*IS 842
            +D+ LA+WIS YL PHQAAF+EQC+S+RRQ  L S NCGILPFDS FRYLFLPD +S
Sbjct: 572  DDAKLAVWISHYLPPHQAAFVEQCISRRRQSLLGSRNCGILPFDSHFRYLFLPDQLS 628


>ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241082 [Vitis vinifera]
          Length = 566

 Score =  183 bits (465), Expect = 7e-44
 Identities = 88/117 (75%), Positives = 103/117 (88%)
 Frame = -3

Query: 1192 AFALSNGMYSSPAVRIYTAENVEEELQEAQRDFIRAAVGISNKGRLLVPKMLHSFARGII 1013
            AFALS GMYSSP++RIYTA+ V EELQEAQRDFIRA+VG+S+KGRLLVPKMLH FA+G +
Sbjct: 449  AFALSCGMYSSPSIRIYTAKKVREELQEAQRDFIRASVGLSSKGRLLVPKMLHCFAKGFV 508

Query: 1012 EDSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFDSRFRYLFLPD*IS 842
            +D+ LA+WIS YL PHQAAF+EQC+S+RRQ  L S NCGILPFDS FRYLFLPD +S
Sbjct: 509  DDAKLAVWISHYLPPHQAAFVEQCISRRRQSLLGSRNCGILPFDSHFRYLFLPDQLS 565


>ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|222853246|gb|EEE90793.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  181 bits (460), Expect = 2e-43
 Identities = 86/114 (75%), Positives = 102/114 (89%)
 Frame = -3

Query: 1192 AFALSNGMYSSPAVRIYTAENVEEELQEAQRDFIRAAVGISNKGRLLVPKMLHSFARGII 1013
            AFALS GMYSSPAVR++TA+NV EELQEAQ DFIRA+ G+SNKG+LLVPKMLH FA+G +
Sbjct: 328  AFALSCGMYSSPAVRVFTAKNVREELQEAQHDFIRASAGVSNKGKLLVPKMLHCFAKGFV 387

Query: 1012 EDSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFDSRFRYLFLPD 851
            +D++LA+WIS YL P+QAAF+EQC+S+RRQ  L S NCGILPFDSRFRYLFLPD
Sbjct: 388  DDTNLAVWISHYLPPNQAAFVEQCISQRRQSLLGSRNCGILPFDSRFRYLFLPD 441


>ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp.
            lyrata] gi|297330777|gb|EFH61196.1| hypothetical protein
            ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  179 bits (455), Expect = 9e-43
 Identities = 86/113 (76%), Positives = 102/113 (90%)
 Frame = -3

Query: 1189 FALSNGMYSSPAVRIYTAENVEEELQEAQRDFIRAAVGISNKGRLLVPKMLHSFARGIIE 1010
            FALS GMYSSPAVRIYTA+ V+EEL EAQRDFI+A+VG+S+KG+LLVPKMLH +A+ ++E
Sbjct: 465  FALSCGMYSSPAVRIYTAKGVKEELLEAQRDFIQASVGLSSKGKLLVPKMLHCYAKSLVE 524

Query: 1009 DSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFDSRFRYLFLPD 851
            DSSL +WIS YL PHQAAF+EQC+S+RRQ  L+S NCGILPFDSRFRYLFLPD
Sbjct: 525  DSSLGVWISRYLPPHQAAFVEQCISQRRQSLLASRNCGILPFDSRFRYLFLPD 577


>dbj|BAJ33667.1| unnamed protein product [Thellungiella halophila]
          Length = 590

 Score =  179 bits (453), Expect = 2e-42
 Identities = 85/114 (74%), Positives = 102/114 (89%)
 Frame = -3

Query: 1192 AFALSNGMYSSPAVRIYTAENVEEELQEAQRDFIRAAVGISNKGRLLVPKMLHSFARGII 1013
            AFALS GMYSSPAVR+YTA+ V+EEL EAQRDFI+A+VG+S+KG+LLVPKMLH +A+  +
Sbjct: 471  AFALSCGMYSSPAVRVYTAKGVKEELLEAQRDFIQASVGLSSKGKLLVPKMLHCYAKSFV 530

Query: 1012 EDSSLALWISTYLLPHQAAFIEQCMSKRRQLWLSSCNCGILPFDSRFRYLFLPD 851
            EDS+L +WIS YL PHQAAF+EQC+S+RRQ  L+S NCGILPFDSRFRYLFLPD
Sbjct: 531  EDSNLGVWISKYLPPHQAAFVEQCISQRRQSLLASRNCGILPFDSRFRYLFLPD 584


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