BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005386
         (1951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD...   906   0.0  
ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kD...   887   0.0  
ref|XP_002530328.1| signal recognition particle protein, putativ...   885   0.0  
ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arab...   863   0.0  
ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kD...   862   0.0  

>ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
            chloroplastic-like [Vitis vinifera]
            gi|297740127|emb|CBI30309.3| unnamed protein product
            [Vitis vinifera]
          Length = 567

 Score =  906 bits (2341), Expect = 0.0
 Identities = 463/519 (89%), Positives = 498/519 (95%)
 Frame = +2

Query: 17   SSRNHFTREIWSWVQMKRVTVRREMRGVVRAEMFGQLTSGLESAWSKLKGEEVLTKENIV 196
            SSRN FTRE+WS V+ K V+VRR+M GV+RAEMFGQLTSGLE+AW+KLKGEEVLTKENIV
Sbjct: 48   SSRNPFTREVWSLVKSKSVSVRRQMPGVIRAEMFGQLTSGLEAAWTKLKGEEVLTKENIV 107

Query: 197  EPMKEIRRALLEADVSLPVARRFVQTVGEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGG 376
            EPM++IRRALLEADVSLPV RRFVQ V EQAVGVGLIRGVKPDQQLVKIV DELVKLMGG
Sbjct: 108  EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVKPDQQLVKIVHDELVKLMGG 167

Query: 377  EVSELVFAKSGPTIILLAGLQGVGKTTVCAKLALYLKKQGKSCMLVAADIYRPAAIDQLV 556
            EVSELVFAKSGPT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+YRPAAIDQLV
Sbjct: 168  EVSELVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAGDVYRPAAIDQLV 227

Query: 557  ILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVK 736
            ILGEQV+VPVYTAGTEVKP+ IA+QGL+EA+KKN DVVIVDTAGRLQIDK MMDELK+VK
Sbjct: 228  ILGEQVDVPVYTAGTEVKPSQIAKQGLEEARKKNIDVVIVDTAGRLQIDKAMMDELKDVK 287

Query: 737  RALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVREVSGKP 916
            RA+NPTEVLLVVDAMTGQEAA LVT FN+EIGITGAILTKLDGDSRGGAALSV+EVSGKP
Sbjct: 288  RAINPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKP 347

Query: 917  IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFD 1096
            IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAEELQKKIMS KFD
Sbjct: 348  IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFD 407

Query: 1097 FNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENP 1276
            FNDFLKQTR VA+MGSMTRVLGMIPGMGKVTPAQIREAEKSLK+MEGMIEAMTPEERE P
Sbjct: 408  FNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKMMEGMIEAMTPEEREKP 467

Query: 1277 ELLAESPVRRKRVAKDSGKTEQQVSQLVTQLFQMRVRMKNLMGVMQGGSIPALNNLEESL 1456
            ELLAESPVRRKRVA+DSGKTEQQVSQLV QLFQMRVRMKNLMGVM+GGSIPAL+NLEE+L
Sbjct: 468  ELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEETL 527

Query: 1457 KAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGAK 1573
            K+EQKAPPGTARRKR+SESR+QFA+ A++RPSPRGFG++
Sbjct: 528  KSEQKAPPGTARRKRRSESRKQFAEPASSRPSPRGFGSR 566


>ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
            chloroplastic-like [Cucumis sativus]
            gi|449482550|ref|XP_004156318.1| PREDICTED: signal
            recognition particle 54 kDa protein, chloroplastic-like
            [Cucumis sativus]
          Length = 572

 Score =  887 bits (2292), Expect = 0.0
 Identities = 454/518 (87%), Positives = 487/518 (94%)
 Frame = +2

Query: 17   SSRNHFTREIWSWVQMKRVTVRREMRGVVRAEMFGQLTSGLESAWSKLKGEEVLTKENIV 196
            SSRN FTREIW W+  K V  RR+MRGVVRAEMFGQLTSGLE+AW+KLKGEEVL+KENIV
Sbjct: 54   SSRNLFTREIWGWLHAKTVNTRRDMRGVVRAEMFGQLTSGLEAAWNKLKGEEVLSKENIV 113

Query: 197  EPMKEIRRALLEADVSLPVARRFVQTVGEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGG 376
            EPM++IRRALLEADVSLPV RRFVQ V +QAVGVG+IRGV+PDQQLVKIV DELVKLMGG
Sbjct: 114  EPMRDIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIVHDELVKLMGG 173

Query: 377  EVSELVFAKSGPTIILLAGLQGVGKTTVCAKLALYLKKQGKSCMLVAADIYRPAAIDQLV 556
            EVSELVF+KSGPT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+YRPAAIDQLV
Sbjct: 174  EVSELVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQLV 233

Query: 557  ILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVK 736
            ILGEQV VPVYTAGTEVKP+DIA+QGLQEA+K   DVVIVDTAGRLQID+ MMDELKEVK
Sbjct: 234  ILGEQVGVPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDRAMMDELKEVK 293

Query: 737  RALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVREVSGKP 916
            R +NPTEVLLVVDAMTGQEAA LVT FN+EIGITGAILTKLDGDSRGGAALSV+EVSGKP
Sbjct: 294  RVINPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKP 353

Query: 917  IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFD 1096
            IKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAEELQKKI+S KFD
Sbjct: 354  IKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFD 413

Query: 1097 FNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENP 1276
            FNDFLKQTR VA+MGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIME MIEAMTPEERE P
Sbjct: 414  FNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIEAMTPEEREKP 473

Query: 1277 ELLAESPVRRKRVAKDSGKTEQQVSQLVTQLFQMRVRMKNLMGVMQGGSIPALNNLEESL 1456
            ELLAESP RRKRVA+DSGKTEQQVSQLV QLFQMRVRMKNLMGVM+GGSIPALNNLEE+L
Sbjct: 474  ELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALNNLEEAL 533

Query: 1457 KAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGA 1570
            KAEQKAPPGTARRKR+SESR+QFA+S   R SPRGFG+
Sbjct: 534  KAEQKAPPGTARRKRRSESRKQFANS-ETRSSPRGFGS 570


>ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
            gi|223530132|gb|EEF32044.1| signal recognition particle
            protein, putative [Ricinus communis]
          Length = 572

 Score =  885 bits (2286), Expect = 0.0
 Identities = 454/520 (87%), Positives = 487/520 (93%), Gaps = 2/520 (0%)
 Frame = +2

Query: 17   SSRNHFTREIWSWVQMKR--VTVRREMRGVVRAEMFGQLTSGLESAWSKLKGEEVLTKEN 190
            SSRN FTREIW WV  K   VT+RR+    V+AEMFGQLT+GLESAWSKLKG E LTKEN
Sbjct: 51   SSRNLFTREIWRWVNCKSSVVTLRRDFHSAVKAEMFGQLTTGLESAWSKLKGAETLTKEN 110

Query: 191  IVEPMKEIRRALLEADVSLPVARRFVQTVGEQAVGVGLIRGVKPDQQLVKIVRDELVKLM 370
            I EPM+++RRALLEADVSLPV RRFVQ+V ++A+GVGLIRGVKPDQQLVKIV DELVKLM
Sbjct: 111  IAEPMRDMRRALLEADVSLPVVRRFVQSVTDEAIGVGLIRGVKPDQQLVKIVHDELVKLM 170

Query: 371  GGEVSELVFAKSGPTIILLAGLQGVGKTTVCAKLALYLKKQGKSCMLVAADIYRPAAIDQ 550
            GGEVSELVFAK  PT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+YRPAAIDQ
Sbjct: 171  GGEVSELVFAKYSPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAIDQ 230

Query: 551  LVILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKE 730
            LVILGEQV VPVYT GTEVKP++IA++GL+EAKKKN DVVIVDTAGRLQIDKGMMDELKE
Sbjct: 231  LVILGEQVGVPVYTEGTEVKPSEIAKRGLEEAKKKNIDVVIVDTAGRLQIDKGMMDELKE 290

Query: 731  VKRALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVREVSG 910
            VKR LNPTEVLLVVDAMTGQEAA LVT FNLEIGITGAILTKLDGDSRGGAALSV+EVSG
Sbjct: 291  VKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSG 350

Query: 911  KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTK 1090
            KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAE+LQKKIMS K
Sbjct: 351  KPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAK 410

Query: 1091 FDFNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERE 1270
            FDFNDFLKQTR VA+MGSMTRV+GMIPGMGKVTPAQIREAEKSLKIME MIEAMTPEERE
Sbjct: 411  FDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQIREAEKSLKIMESMIEAMTPEERE 470

Query: 1271 NPELLAESPVRRKRVAKDSGKTEQQVSQLVTQLFQMRVRMKNLMGVMQGGSIPALNNLEE 1450
             PELLAESP RRKR+A+DSGKTEQQVSQLV QLFQMRVRMKNLMGVM+GGSIPAL+NLE+
Sbjct: 471  KPELLAESPTRRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLED 530

Query: 1451 SLKAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGA 1570
            +LKAEQKAPPGTARRKR+SESRRQFADSA++RPSPRGFG+
Sbjct: 531  ALKAEQKAPPGTARRKRRSESRRQFADSASSRPSPRGFGS 570


>ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
            lyrata] gi|297318961|gb|EFH49383.1| hypothetical protein
            ARALYDRAFT_487173 [Arabidopsis lyrata subsp. lyrata]
          Length = 562

 Score =  863 bits (2230), Expect = 0.0
 Identities = 439/518 (84%), Positives = 480/518 (92%)
 Frame = +2

Query: 17   SSRNHFTREIWSWVQMKRVTVRREMRGVVRAEMFGQLTSGLESAWSKLKGEEVLTKENIV 196
            SSRN  TREIWSWV+ K V   R  R  VRAEMFGQLT GLE+AWSKLKGEEVLTKENI 
Sbjct: 43   SSRNPSTREIWSWVKSKTVGQGRYRRSYVRAEMFGQLTGGLEAAWSKLKGEEVLTKENIA 102

Query: 197  EPMKEIRRALLEADVSLPVARRFVQTVGEQAVGVGLIRGVKPDQQLVKIVRDELVKLMGG 376
            EPM++IRRALLEADVSLPV RRFVQ+V +QAVG+G+IRGVKPDQQLVKIV DELVKLMGG
Sbjct: 103  EPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLVKIVHDELVKLMGG 162

Query: 377  EVSELVFAKSGPTIILLAGLQGVGKTTVCAKLALYLKKQGKSCMLVAADIYRPAAIDQLV 556
            EVSEL FAKSGPT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCML+A D+YRPAAIDQLV
Sbjct: 163  EVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLV 222

Query: 557  ILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELKEVK 736
            ILGEQV VPVYTAGT+VKPADIA+QGL+EAKK N DVVI+DTAGRLQIDKGMMDELK+VK
Sbjct: 223  ILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVK 282

Query: 737  RALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVREVSGKP 916
            + LNPTEVLLVVDAMTGQEAA LVT FN+EIGITGAILTKLDGDSRGGAALSV+EVSGKP
Sbjct: 283  KFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKP 342

Query: 917  IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMSTKFD 1096
            IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVMR+EDAE+LQKKIMS KFD
Sbjct: 343  IKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFD 402

Query: 1097 FNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEERENP 1276
            FNDFLKQTR VA+MGSMTRVLGMIPGMGKV+PAQIREAEK+L +ME MIE MTPEERE P
Sbjct: 403  FNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERP 462

Query: 1277 ELLAESPVRRKRVAKDSGKTEQQVSQLVTQLFQMRVRMKNLMGVMQGGSIPALNNLEESL 1456
            ELLAESP RRKR+AKDSGKTEQQVS LV Q+FQMRV+MKNLMGVM+GGSIPAL+ LE++L
Sbjct: 463  ELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDAL 522

Query: 1457 KAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGA 1570
            KAEQKAPPGTARRKRK++SR++F +SA+++P PRGFG+
Sbjct: 523  KAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 560


>ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
            chloroplastic-like [Glycine max]
          Length = 565

 Score =  862 bits (2227), Expect = 0.0
 Identities = 443/522 (84%), Positives = 487/522 (93%), Gaps = 3/522 (0%)
 Frame = +2

Query: 17   SSRNHFTREIWSWVQM--KRVTVRREMRGVV-RAEMFGQLTSGLESAWSKLKGEEVLTKE 187
            +S N F +E+W WV    K V VRR+ RGVV RAEMFGQLTSGLE+AW+KLKGEEVL+KE
Sbjct: 43   TSPNCFAKEVWGWVNSNSKGVAVRRDTRGVVVRAEMFGQLTSGLETAWNKLKGEEVLSKE 102

Query: 188  NIVEPMKEIRRALLEADVSLPVARRFVQTVGEQAVGVGLIRGVKPDQQLVKIVRDELVKL 367
            NIVEPM++IRRALLEADVSLPV RRFVQ+V +QAVGVG+IRGV+PDQQLVKIV DELV+L
Sbjct: 103  NIVEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVRPDQQLVKIVHDELVRL 162

Query: 368  MGGEVSELVFAKSGPTIILLAGLQGVGKTTVCAKLALYLKKQGKSCMLVAADIYRPAAID 547
            MGGEVSELVFAKSGPT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+YRPAAID
Sbjct: 163  MGGEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAAID 222

Query: 548  QLVILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDKGMMDELK 727
            QL ILG+QV+VPVYTAGT+VKP++IA+QGL+EAKKK  DVVIVDTAGRLQIDK MMDELK
Sbjct: 223  QLAILGKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTMMDELK 282

Query: 728  EVKRALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAALSVREVS 907
            EVK+ALNPTEVLLVVDAMTGQEAA LVT FNLEIGITGAILTKLDGDSRGGAALSV+EVS
Sbjct: 283  EVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVS 342

Query: 908  GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEELQKKIMST 1087
            GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VMR+EDAEELQKKIMS 
Sbjct: 343  GKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQKKIMSA 402

Query: 1088 KFDFNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIEAMTPEER 1267
            KFDFNDFLKQTRTVA+MGS++RV+GMIPGMGKVTPAQIR+AEK+L+ ME MIEAMTPEER
Sbjct: 403  KFDFNDFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLQNMEAMIEAMTPEER 462

Query: 1268 ENPELLAESPVRRKRVAKDSGKTEQQVSQLVTQLFQMRVRMKNLMGVMQGGSIPALNNLE 1447
            E PELLAESPVRRKRVA+DSGKTEQQVSQLV QLFQMRVRMKNLMGVM+ GS+P L+NLE
Sbjct: 463  EKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMESGSLPTLSNLE 522

Query: 1448 ESLKAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGAK 1573
            E+LKAE+KAPPGTARR+++SESR  F DS  ARPSPRGFG+K
Sbjct: 523  EALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFGSK 564