BLASTX nr result

ID: Coptis23_contig00005379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005379
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306852.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002302044.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
emb|CBI37125.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002278029.1| PREDICTED: mitochondrial inner membrane prot...   134   6e-30
gb|AFK43512.1| unknown [Lotus japonicus]                              130   1e-28

>ref|XP_002306852.1| predicted protein [Populus trichocarpa] gi|222856301|gb|EEE93848.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/75 (85%), Positives = 70/75 (93%)
 Frame = -1

Query: 227 HWNKGEEMAPTIGAQGGTLLVRKLPHADPTRVFVGDVVLVKDPEKPDDYLVRRLAAIEGY 48
           HWNKG+EMAPTIG QGGTLLVRKLP ADP RVFVGDVVL+KDPEK D++LVRRLAAIEGY
Sbjct: 53  HWNKGQEMAPTIGDQGGTLLVRKLPSADPMRVFVGDVVLLKDPEKSDNFLVRRLAAIEGY 112

Query: 47  EMVSSDEKDEPFVLE 3
           EM S+DEKDEPFVL+
Sbjct: 113 EMASTDEKDEPFVLD 127


>ref|XP_002302044.1| predicted protein [Populus trichocarpa] gi|222843770|gb|EEE81317.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/75 (85%), Positives = 71/75 (94%)
 Frame = -1

Query: 227 HWNKGEEMAPTIGAQGGTLLVRKLPHADPTRVFVGDVVLVKDPEKPDDYLVRRLAAIEGY 48
           HWNKG+EMAPTIG QGGTLLVRKLP ADP RVFVGDVVL+KDPEK D++LVRRLAAIEGY
Sbjct: 53  HWNKGQEMAPTIGDQGGTLLVRKLPTADPMRVFVGDVVLLKDPEKSDNFLVRRLAAIEGY 112

Query: 47  EMVSSDEKDEPFVLE 3
           EMVS+DEKD+PFVL+
Sbjct: 113 EMVSTDEKDDPFVLD 127


>emb|CBI37125.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/75 (85%), Positives = 70/75 (93%)
 Frame = -1

Query: 227 HWNKGEEMAPTIGAQGGTLLVRKLPHADPTRVFVGDVVLVKDPEKPDDYLVRRLAAIEGY 48
           HWNKG EMAPTIG QGGTLLVRKLP ADPTRVFVGDVV++KDPE+ D+YLVRRLAA+EGY
Sbjct: 92  HWNKGGEMAPTIGEQGGTLLVRKLPAADPTRVFVGDVVVLKDPEESDNYLVRRLAAVEGY 151

Query: 47  EMVSSDEKDEPFVLE 3
           EM S+DEKDEPFVLE
Sbjct: 152 EMGSTDEKDEPFVLE 166


>ref|XP_002278029.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           [Vitis vinifera]
          Length = 205

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/75 (85%), Positives = 70/75 (93%)
 Frame = -1

Query: 227 HWNKGEEMAPTIGAQGGTLLVRKLPHADPTRVFVGDVVLVKDPEKPDDYLVRRLAAIEGY 48
           HWNKG EMAPTIG QGGTLLVRKLP ADPTRVFVGDVV++KDPE+ D+YLVRRLAA+EGY
Sbjct: 53  HWNKGGEMAPTIGEQGGTLLVRKLPAADPTRVFVGDVVVLKDPEESDNYLVRRLAAVEGY 112

Query: 47  EMVSSDEKDEPFVLE 3
           EM S+DEKDEPFVLE
Sbjct: 113 EMGSTDEKDEPFVLE 127


>gb|AFK43512.1| unknown [Lotus japonicus]
          Length = 205

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/75 (81%), Positives = 69/75 (92%)
 Frame = -1

Query: 227 HWNKGEEMAPTIGAQGGTLLVRKLPHADPTRVFVGDVVLVKDPEKPDDYLVRRLAAIEGY 48
           HWN+GEEMAPTI  +  TLLVRKLP+ADPTRVFVGDVV++KDP KPD+YLVRRLAA+EGY
Sbjct: 53  HWNQGEEMAPTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGY 112

Query: 47  EMVSSDEKDEPFVLE 3
           EM S+DEKDEPFVLE
Sbjct: 113 EMASTDEKDEPFVLE 127


Top