BLASTX nr result

ID: Coptis23_contig00005376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005376
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...    94   9e-18
ref|XP_004170204.1| PREDICTED: probable LRR receptor-like serine...    94   1e-17
ref|XP_004138567.1| PREDICTED: probable LRR receptor-like serine...    94   1e-17
ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002526809.1| serine-threonine protein kinase, plant-type,...    92   4e-17

>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   LNLSFNNLEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKKQGLPLALKV 181
           +NLS+N+ EG +P +GVF+NVSA S++GN  +CGGIP   L KC +Q+ KK+GL LALK+
Sbjct: 525 VNLSYNDFEGILPTEGVFKNVSATSIMGNSKLCGGIPEFQLPKCNLQEPKKRGLSLALKI 584

Query: 182 TIGLAIPLFGIASFL-FVVYWRKRHKPVIPSSNLFLESIGYPGHRLKSVSYNDLWQATNG 358
            I     L  I   L F+++   R K   P+S+   +S       L  VSY  L +AT+G
Sbjct: 585 IIATVSGLLAITCVLSFLIFLWLRKKKGEPASSSSEKS-------LLKVSYQSLLRATDG 637

Query: 359 FS 364
           FS
Sbjct: 638 FS 639


>ref|XP_004170204.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 751

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
 Frame = +2

Query: 2   LNLSFNNLEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKKQGLPLALKV 181
           LNLSFNNLEGEVP +GV +N +AFS++GN  +CGGI  L+L +C  Q   KQ   + +K+
Sbjct: 597 LNLSFNNLEGEVPTQGVLKNATAFSIIGNKKLCGGIHELNLSRCSFQSPTKQKPTMTVKI 656

Query: 182 TIGLAIPLFGIASFLFVV--YWRKRHKPVIPSSNLFLESIGYPGHRLKSVSYNDLWQATN 355
            + +   L G     FVV  +W ++ K     + L L+ +  P      VSYNDL +ATN
Sbjct: 657 IVSVVGGLVGSVLVFFVVLFFWSRKRK-----NKLDLDPL--PSVSCLVVSYNDLLKATN 709

Query: 356 GFS 364
            FS
Sbjct: 710 EFS 712


>ref|XP_004138567.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 751

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
 Frame = +2

Query: 2   LNLSFNNLEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKKQGLPLALKV 181
           LNLSFNNLEGEVP +GV +N +AFS++GN  +CGGI  L+L +C  Q   KQ   + +K+
Sbjct: 597 LNLSFNNLEGEVPTQGVLKNATAFSIIGNKKLCGGIHELNLSRCSFQSPTKQKPTMTVKI 656

Query: 182 TIGLAIPLFGIASFLFVV--YWRKRHKPVIPSSNLFLESIGYPGHRLKSVSYNDLWQATN 355
            + +   L G     FVV  +W ++ K     + L L+ +  P      VSYNDL +ATN
Sbjct: 657 IVSVVGGLVGSVLVFFVVLFFWSRKRK-----NKLDLDPL--PSVSCLVVSYNDLLKATN 709

Query: 356 GFS 364
            FS
Sbjct: 710 EFS 712


>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
           predicted protein [Populus trichocarpa]
          Length = 1017

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/121 (45%), Positives = 70/121 (57%)
 Frame = +2

Query: 2   LNLSFNNLEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKKQGLPLALKV 181
           LNLSFN+ EGEVP KG F N +A SV GN  +CGGI  L L KC  +++KK  +PL L +
Sbjct: 597 LNLSFNDFEGEVPTKGAFGNATAISVDGNKKLCGGISELKLPKCNFKKSKKWKIPLWLIL 656

Query: 182 TIGLAIPLFGIASFLFVVYWRKRHKPVIPSSNLFLESIGYPGHRLKSVSYNDLWQATNGF 361
            + +A    G+A   FV+ +  R K    SS L L+        L  VSY  L +ATNGF
Sbjct: 657 LLTIACGFLGVAVVSFVLLYLSRRKRKEQSSELSLK------EPLPKVSYEMLLKATNGF 710

Query: 362 S 364
           S
Sbjct: 711 S 711


>ref|XP_002526809.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533813|gb|EEF35544.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 923

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   LNLSFNNLEGEVPMKGVFQNVSAFSVVGNDNICGGIPALDLLKCQIQQTKKQGLPLALKV 181
           LNLSFN L GEVP +G+F N SA S++GN++ CGGI  L L  C    +KK+ L LALKV
Sbjct: 509 LNLSFNQLRGEVPERGIFLNASAVSLLGNNSFCGGITELKLPSCPFTNSKKKNLTLALKV 568

Query: 182 TIGLAIPLFGIASFLFV-VYWRKRHKPVIPSSNLFLESIGYPGHRLKSVSYNDLWQATNG 358
            I + +    +A F+F  ++W +  K +    N+   S     H+   +SY +L++AT+G
Sbjct: 569 IIPVVVFAIFLAGFVFFSIFWHQ--KRMSRKKNISTPSF---EHKFLRISYTELFKATDG 623

Query: 359 FS 364
           FS
Sbjct: 624 FS 625


Top