BLASTX nr result

ID: Coptis23_contig00005365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005365
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...   135   7e-30
ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|2...   111   1e-22
gb|ABK23529.1| unknown [Picea sitchensis]                              98   2e-18

>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  143 bits (360), Expect = 4e-32
 Identities = 79/165 (47%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
 Frame = -3

Query: 660 EMFCNLNPAHMHAPIFSTRRSPFQKTAKFNLISCRANTLETQ-RVGTSFYELLSLESQNV 484
           EM   ++P   +      ++   QK+ K   I C+  T E   R   +FYE+LSL SQNV
Sbjct: 2   EMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNV 61

Query: 483 GFEDIKKAYRTMARRYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLS 304
           GF++IKKAYR+MA +YHPDV P S KEESTK+FVELQ+AYETLS+PI+R+ YD ELG ++
Sbjct: 62  GFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGMVN 121

Query: 303 RCG--MNGMRSEEWRTHFHKQVWEDQLGGLELKSNSKKFRNNRAY 175
             G    G+ SE+ ++ F ++VWE QL GL  +S ++  R N  Y
Sbjct: 122 SVGFAFEGLPSEDRKSSFPREVWERQLHGLYQRSYARVERRNNGY 166


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score =  135 bits (340), Expect = 7e-30
 Identities = 69/137 (50%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
 Frame = -3

Query: 579 KFNLISCRANTLETQRVGTSFYELLSLESQNVGFEDIKKAYRTMARRYHPDVVPSSRKEE 400
           K   I+C    ++ ++  T+FYE+LSL+S+NVGF++I+KAYR+MA ++HPDV   S KEE
Sbjct: 31  KARTITCSYRIMQEKK--TNFYEVLSLQSKNVGFDEIRKAYRSMALQFHPDVCRLSAKEE 88

Query: 399 STKKFVELQQAYETLSNPISRQKYDFELGYLSRCGMN-GMRSEEWRTHFHKQVWEDQLGG 223
           STK+FVELQ+AYETLS+P+SR+ YD+EL  ++  G+   +R EE +  F K+VWE QL G
Sbjct: 89  STKRFVELQKAYETLSDPVSRRLYDYELNLVASIGLGLEIRMEERKNSFPKEVWEMQLYG 148

Query: 222 LELKSNSKKFRNNRAYM 172
           L  +S+ +  R N+ YM
Sbjct: 149 LSQRSHIRLQRKNKKYM 165


>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  134 bits (337), Expect = 2e-29
 Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 1/163 (0%)
 Frame = -3

Query: 660 EMFCNLNPAHMHAPIFSTRRSPFQKTAKFNLISCRANTLETQ-RVGTSFYELLSLESQNV 484
           EM   ++P   +      ++   QK+ K   I C+  T E   R   +FYE+LSL SQNV
Sbjct: 2   EMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNV 61

Query: 483 GFEDIKKAYRTMARRYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLS 304
           GF++IKKAYR+MA +YHPDV P S KEESTK+FVELQ+AYETLS+PI+R+ YD EL    
Sbjct: 62  GFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLEL---- 117

Query: 303 RCGMNGMRSEEWRTHFHKQVWEDQLGGLELKSNSKKFRNNRAY 175
                G+ SE+ +  F ++VWE QL GL  +S ++  R N  Y
Sbjct: 118 -----GLPSEDRKNSFPREVWERQLHGLYQRSYARVERWNNGY 155


>ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|222855770|gb|EEE93317.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  111 bits (278), Expect = 1e-22
 Identities = 55/114 (48%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
 Frame = -3

Query: 507 LSLESQNVGFEDIKKAYRTMARRYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKY 328
           L +      F++IKKAYR+MA +YHPDV   S +EESTK+FVELQ+AYETLS+P+SR+ +
Sbjct: 5   LQVNLNTARFDEIKKAYRSMALQYHPDVCTPSAREESTKRFVELQKAYETLSDPVSRRMH 64

Query: 327 DFELGYLSRCG--MNGMRSEEWRTHFHKQVWEDQLGGLELKSNSKKFRNNRAYM 172
           D+ELG ++  G    G+  E+ +  F ++VWE QL GL+ +S ++  R N  YM
Sbjct: 65  DYELGLVNSGGFAFEGLPLEDRKNRFPREVWERQLHGLQQRSYARMERRNNKYM 118


>gb|ABK23529.1| unknown [Picea sitchensis]
          Length = 177

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 63/161 (39%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
 Frame = -3

Query: 648 NLNPAHMHAPIFSTRRSPFQKTAKFNLISCRANTL-ETQRVGTSFYELLSLESQNVGFED 472
           +LN  H+  P+   RR          LI   A  L  +     SFYELL + S++VG  D
Sbjct: 12  SLNHGHIRYPVLHYRR----------LICPPARALLNSVERPPSFYELLGI-SEDVGLRD 60

Query: 471 IKKAYRTMARRYHPDVVPSSRKEESTKKFVELQQAYETLSNPISRQKYDFELGYLSRCGM 292
           IK+AYR MAR+YHPDV P  + EE T++F+E+Q+AYETLS+P  +  YD  L      G+
Sbjct: 61  IKQAYRQMARKYHPDVCPPEQAEEYTRRFIEVQEAYETLSDPRRKNLYDSYLSGRIHAGV 120

Query: 291 NG----------MRSEEWRTHFHKQVWEDQLGGLELKSNSK 199
           +G          +  EEWR+      WE QL  L+ ++N K
Sbjct: 121 SGINRWDYTQEELAKEEWRSR-----WETQLYDLKQRANFK 156


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