BLASTX nr result

ID: Coptis23_contig00005362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005362
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262838.1| PREDICTED: uncharacterized protein LOC100255...   372   e-100
ref|XP_002267135.1| PREDICTED: uncharacterized protein LOC100243...   352   9e-95
ref|XP_002309917.1| predicted protein [Populus trichocarpa] gi|2...   344   3e-92
ref|XP_002307472.1| predicted protein [Populus trichocarpa] gi|2...   343   6e-92
ref|XP_002520252.1| conserved hypothetical protein [Ricinus comm...   333   6e-89

>ref|XP_002262838.1| PREDICTED: uncharacterized protein LOC100255146 [Vitis vinifera]
          Length = 332

 Score =  372 bits (954), Expect = e-100
 Identities = 185/332 (55%), Positives = 231/332 (69%)
 Frame = +2

Query: 110  MDREPEELQFIGFIGIYKEAYKIVLSWKKIFTQIVLGLIVPLTFIFLAHTQMSDSIFGKI 289
            MD E EELQF+GF GI KE+ KI+ SW+KIF+QI L LI+PLTFIFLAH ++SD +F KI
Sbjct: 1    MDVEQEELQFLGFFGIIKESVKIIYSWRKIFSQITLALILPLTFIFLAHIEVSDFLFFKI 60

Query: 290  IRNEEALDYTRTGSPTYNRISNRLSSEWITFWLFKXXXXXXXXXXXXXXXXXXXXXIACI 469
            +RNE+ LD TR G+P Y ++S+ +SSEWI FWL K                     +AC+
Sbjct: 61   LRNEDKLDRTRAGTPKYEKLSDVISSEWIVFWLLKVAYFTFLLIFSLLCTSAVVYAVACV 120

Query: 470  YTAKDLTFKKVLSVVPKVWKRLMITFLWNFTIMFAYNFVAISLIILSAFLMGQSVPGXXX 649
            Y+AK +TFK+VLSVVPKVWKRLM+TF+WNF I+F YN VA  ++ + A L+G +V G   
Sbjct: 121  YSAKQITFKRVLSVVPKVWKRLMVTFIWNFVIVFCYNVVAGVVLFMWAILIGNNVFGLVI 180

Query: 650  XXXXXXXXXXGFVYINVIWHLASVISVLEDVYGIQAMIKSKALIKGKMGVASALYISIQF 829
                      GFVYI+V+WHLASV+SVLED YGIQAM+KSKALIKGK GVA A+++ +  
Sbjct: 181  LLLLLIIYVMGFVYISVVWHLASVVSVLEDSYGIQAMVKSKALIKGKTGVAVAIFLILNI 240

Query: 830  SIFVIQLTFQKLVVHGDSLGMMFRTSYGIVCFFXXXXXXXXXXVVQTIVYFLCKSYHHES 1009
              F+IQL F+ LVV G  L    R    I+ F           V+QT++YF+CKSYHHE+
Sbjct: 241  CYFIIQLAFENLVVLGYPLSTPNRILLAIIFFLFLFKLILFGLVIQTVIYFVCKSYHHEN 300

Query: 1010 IDKSCLSDHLEVYLGEYAPLKGRDVQLEQFYV 1105
            IDKS LSDHLEVYLGEY PLK +DVQLEQF V
Sbjct: 301  IDKSSLSDHLEVYLGEYVPLKSKDVQLEQFDV 332


>ref|XP_002267135.1| PREDICTED: uncharacterized protein LOC100243726 [Vitis vinifera]
          Length = 332

 Score =  352 bits (904), Expect = 9e-95
 Identities = 176/332 (53%), Positives = 229/332 (68%)
 Frame = +2

Query: 110  MDREPEELQFIGFIGIYKEAYKIVLSWKKIFTQIVLGLIVPLTFIFLAHTQMSDSIFGKI 289
            MD E EE+QF+G  GIYKEAYKI+ SWKKIF+QI + LI+PL FIFLA+ ++SD +F KI
Sbjct: 1    MDLEQEEMQFLGIFGIYKEAYKIIFSWKKIFSQITVALILPLCFIFLAYIEVSDYLFQKI 60

Query: 290  IRNEEALDYTRTGSPTYNRISNRLSSEWITFWLFKXXXXXXXXXXXXXXXXXXXXXIACI 469
            + +E  LD TR  S  YN+IS+ LSSE I FWL K                     IACI
Sbjct: 61   VIHEFELDGTRVDSAKYNKISDLLSSELIAFWLLKLAYLVFTLIFSLLSTSAVVYTIACI 120

Query: 470  YTAKDLTFKKVLSVVPKVWKRLMITFLWNFTIMFAYNFVAISLIILSAFLMGQSVPGXXX 649
            YT +++TFKKV+SVVP+VWKRLM+TFL  F  +FAYN  A+ ++IL A  +G    G   
Sbjct: 121  YTGREVTFKKVMSVVPRVWKRLMVTFLCIFVAVFAYNIFALLILILWALCIGPVKIGILI 180

Query: 650  XXXXXXXXXXGFVYINVIWHLASVISVLEDVYGIQAMIKSKALIKGKMGVASALYISIQF 829
                      G  Y+++IW LASV+SVLED+YG +AM+KS+ALI+GK+ VA  +++ +  
Sbjct: 181  LWVMFILYLVGLSYMSIIWQLASVVSVLEDLYGFRAMVKSRALIRGKLVVAIVIFLKLNI 240

Query: 830  SIFVIQLTFQKLVVHGDSLGMMFRTSYGIVCFFXXXXXXXXXXVVQTIVYFLCKSYHHES 1009
            S+FVI++ F++LVV+G SLGM  R  YGI+CF           V+QTI+YF+CKSYHHE+
Sbjct: 241  SLFVIKIAFERLVVYGASLGMANRVGYGILCFLLLFKLFLFGLVLQTIIYFVCKSYHHEN 300

Query: 1010 IDKSCLSDHLEVYLGEYAPLKGRDVQLEQFYV 1105
            IDKS LSDHLEVY+GEY PLK +DVQLEQ+ V
Sbjct: 301  IDKSALSDHLEVYMGEYVPLKAKDVQLEQYDV 332


>ref|XP_002309917.1| predicted protein [Populus trichocarpa] gi|222852820|gb|EEE90367.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  344 bits (882), Expect = 3e-92
 Identities = 168/334 (50%), Positives = 228/334 (68%), Gaps = 4/334 (1%)
 Frame = +2

Query: 110  MDREPEELQFIGFIGIYKEAYKIVLSWKKIFTQIVLGLIVPLTFIFLAHTQMSDSIFGKI 289
            MDRE EELQF+GF GI+KE++KI+L+W+KIF++I L LI+PL+FIFLAH Q+S  IF KI
Sbjct: 1    MDREQEELQFLGFFGIFKESFKIILTWRKIFSKITLALILPLSFIFLAHMQISQMIFFKI 60

Query: 290  IRNEEALDYTRTGSPTYNRISNRLSSEWITFWLFKXXXXXXXXXXXXXXXXXXXXXIACI 469
            + N++ LD+T++G+P ++++S+ +S+EW  FWLFK                     IACI
Sbjct: 61   LDNQDTLDFTQSGTPKHDKLSDTISAEWTAFWLFKFAYFTFLLIFSLLSTSAVVYTIACI 120

Query: 470  YTAKDLTFKKVLSVVPKVWKRLMITFLWNFTIMFAYNFVAISLIILSAFLMGQSVPG--- 640
            YTAK +TFKK++SVVPKVWKRLM+TF+W+F ++  YN V+I ++I+ +F +   VP    
Sbjct: 121  YTAKPITFKKIMSVVPKVWKRLMVTFIWSFAVVVLYNIVSIVVLIILSFTLINHVPAAGF 180

Query: 641  -XXXXXXXXXXXXXGFVYINVIWHLASVISVLEDVYGIQAMIKSKALIKGKMGVASALYI 817
                          G +YI ++WHLASVISVLED YGI+AM+KS+ LIKGKMG+A A++I
Sbjct: 181  RILFLVVLVILYSVGLLYITIVWHLASVISVLEDFYGIKAMMKSRELIKGKMGIAVAIFI 240

Query: 818  SIQFSIFVIQLTFQKLVVHGDSLGMMFRTSYGIVCFFXXXXXXXXXXVVQTIVYFLCKSY 997
             +      IQ  F+  VV      M  R   G++C            V+QT++YF+CKSY
Sbjct: 241  VVGICFVGIQFLFETFVVL--EWTMEIRIGMGLLCLLLLFKVILFGLVIQTVLYFVCKSY 298

Query: 998  HHESIDKSCLSDHLEVYLGEYAPLKGRDVQLEQF 1099
            HHE+IDKS LSDHLEVYLGEY PLK +DVQ+EQF
Sbjct: 299  HHENIDKSSLSDHLEVYLGEYIPLKSKDVQMEQF 332


>ref|XP_002307472.1| predicted protein [Populus trichocarpa] gi|222856921|gb|EEE94468.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  343 bits (880), Expect = 6e-92
 Identities = 174/334 (52%), Positives = 226/334 (67%), Gaps = 2/334 (0%)
 Frame = +2

Query: 110  MDREPEELQFIGFIGIYKEAYKIVLSWKKIFTQIVLGLIVPLTFIFLAHTQMSDSIFGKI 289
            MDRE EE+QF+G  GIY+EAY+I+ SW+KIF+QI L LI+PL+FIFLAH ++S+ +F KI
Sbjct: 1    MDREQEEMQFLGVFGIYREAYRIIFSWRKIFSQITLALILPLSFIFLAHIEVSNVLFTKI 60

Query: 290  IRNEEALDYTRTGSPTYNRISNRLSSEWITFWLFKXXXXXXXXXXXXXXXXXXXXXIACI 469
            I NE  LD T+ G+  Y +IS+ +SSEW+ FWLFK                     IACI
Sbjct: 61   IYNEVELDETQVGTRKYEKISDMISSEWVYFWLFKAAYFTFLLIFSLLSTAAVVYTIACI 120

Query: 470  YTAKDLTFKKVLSVVPKVWKRLMITFLWNFTIMFAYNFVAISLIILSAFLMGQS--VPGX 643
            YTA+++TFKKV+SVVPKVWKRLM+TFL  F  +FAYNFV+I + I   FL+G    VP  
Sbjct: 121  YTAREVTFKKVMSVVPKVWKRLMVTFLSIFLAVFAYNFVSIFVAITCVFLVGPDKVVP-- 178

Query: 644  XXXXXXXXXXXXGFVYINVIWHLASVISVLEDVYGIQAMIKSKALIKGKMGVASALYISI 823
                        G VY+++IW LASV+SVLE+  G +AM+KS  L+KGKM VA  ++  +
Sbjct: 179  -LLFFLLMVYFLGLVYMSIIWQLASVVSVLEEASGFKAMMKSGELLKGKMWVAIIIFFKL 237

Query: 824  QFSIFVIQLTFQKLVVHGDSLGMMFRTSYGIVCFFXXXXXXXXXXVVQTIVYFLCKSYHH 1003
              S   + + F+  VVHG SLG++ R S+GI+             V+QT++YF+CKSYHH
Sbjct: 238  NLSSLALHILFENKVVHGSSLGILNRASFGILSLLMLLVLYLFGLVIQTVIYFVCKSYHH 297

Query: 1004 ESIDKSCLSDHLEVYLGEYAPLKGRDVQLEQFYV 1105
            E+IDKS LSDHLEVYLGEY PLK +DVQLEQF V
Sbjct: 298  ENIDKSALSDHLEVYLGEYVPLKSKDVQLEQFDV 331


>ref|XP_002520252.1| conserved hypothetical protein [Ricinus communis]
            gi|223540471|gb|EEF42038.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 332

 Score =  333 bits (854), Expect = 6e-89
 Identities = 169/332 (50%), Positives = 221/332 (66%)
 Frame = +2

Query: 110  MDREPEELQFIGFIGIYKEAYKIVLSWKKIFTQIVLGLIVPLTFIFLAHTQMSDSIFGKI 289
            MDRE EE+QF+G   I+KE+YKIV +W+KIF+QI L LI+PL+FIFLAH Q+SD I   I
Sbjct: 1    MDREQEEMQFLGLFDIFKESYKIVFTWRKIFSQITLALILPLSFIFLAHIQISDLISADI 60

Query: 290  IRNEEALDYTRTGSPTYNRISNRLSSEWITFWLFKXXXXXXXXXXXXXXXXXXXXXIACI 469
             R+E+ LD T+ GS    ++++ + SE     LFK                     IACI
Sbjct: 61   NRDEDQLDQTQAGSARNKKLNDLIFSELTYLMLFKFAYFTFFLIFSLLSTAAVVYTIACI 120

Query: 470  YTAKDLTFKKVLSVVPKVWKRLMITFLWNFTIMFAYNFVAISLIILSAFLMGQSVPGXXX 649
            YTA+D++FKKV+SVVPKVWKRLM+TFL  F  +FAYN VA  L I    L+  +  G   
Sbjct: 121  YTARDVSFKKVMSVVPKVWKRLMVTFLCIFGAIFAYNIVAGFLFITWFILLSDTSVGVVS 180

Query: 650  XXXXXXXXXXGFVYINVIWHLASVISVLEDVYGIQAMIKSKALIKGKMGVASALYISIQF 829
                      G VY+ +IW LASV+SVLE+  G++AMIKS+ LI+GK+ +A+ +  ++  
Sbjct: 181  FLAFLVLYFVGVVYLGIIWQLASVVSVLEEACGVKAMIKSRQLIRGKIWIAAIINFTLNL 240

Query: 830  SIFVIQLTFQKLVVHGDSLGMMFRTSYGIVCFFXXXXXXXXXXVVQTIVYFLCKSYHHES 1009
            S+F+IQ  F++LVVHG SL M+ R SYGI+CF           V+ T++YF+CKSYHHE+
Sbjct: 241  SLFIIQAVFERLVVHGRSLNMVNRVSYGIICFLLLFKLFLFGLVIHTVIYFVCKSYHHEN 300

Query: 1010 IDKSCLSDHLEVYLGEYAPLKGRDVQLEQFYV 1105
            IDKS LSDHLEVYLGEY PLK +DVQLEQF V
Sbjct: 301  IDKSALSDHLEVYLGEYVPLKSKDVQLEQFEV 332


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