BLASTX nr result

ID: Coptis23_contig00005357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005357
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148140.1| PREDICTED: uncharacterized protein LOC101211...    71   2e-10
ref|XP_002510936.1| conserved hypothetical protein [Ricinus comm...    70   3e-10
ref|NP_568761.1| uncharacterized protein [Arabidopsis thaliana] ...    70   3e-10
ref|XP_002318883.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
ref|XP_002864115.1| hypothetical protein ARALYDRAFT_495223 [Arab...    67   3e-09

>ref|XP_004148140.1| PREDICTED: uncharacterized protein LOC101211693 [Cucumis sativus]
           gi|449499648|ref|XP_004160874.1| PREDICTED:
           uncharacterized protein LOC101231891 [Cucumis sativus]
          Length = 172

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
 Frame = -2

Query: 656 GKARFRTVFIMQGVIQIVGVLGAFFFPTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHV 477
           GK+RF ++ + Q VIQ+ GV   F   +K    + L I++ I G   + IG+     S  
Sbjct: 35  GKSRFHSLILAQVVIQLCGVAYLFLLTSKKETPDKLAISSAITGFFSLFIGELGQRHSRT 94

Query: 476 TLLSIYCVLSSLATVFCLACTTMN--TFHT--HIPEEMQQKAEIFAYMHIVIGAMVEMYQ 309
           + L +Y + SSL+ +  L   +    TF +   +     ++ E+F  + I +GA+++++ 
Sbjct: 95  SFLKVYAIASSLSLLLLLVDVSQGNYTFESIGDLSNWQAKQLELFEMIRISLGALLQIFA 154

Query: 308 INTSMNLMHNMAPPKR 261
           I+T ++L+ NM+PPKR
Sbjct: 155 ISTVISLVSNMSPPKR 170


>ref|XP_002510936.1| conserved hypothetical protein [Ricinus communis]
           gi|223550051|gb|EEF51538.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 170

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 35/136 (25%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
 Frame = -2

Query: 656 GKARFRTVFIMQGVIQIVGVLGAFFFPTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHV 477
           GK+R  T+ + Q VIQ++G+L      + +   N L I + ++G   ++ G+    RS V
Sbjct: 33  GKSRLCTLILTQAVIQLIGLLCIVLSISNEKGANRLAILSSVIGFFSLLTGELGRRRSRV 92

Query: 476 TLLSIYCVLSSLATVFCLACTTMNTFHTHIPEEM----QQKAEIFAYMHIVIGAMVEMYQ 309
           + L +Y + S +A +  + C T +     + + +    + K E+   + +++G++++++ 
Sbjct: 93  SFLRVYIITSFIALLLSIFCATASNSTLEVIQNLSHWEKNKFELVETLLLILGSLLQLFT 152

Query: 308 INTSMNLMHNMAPPKR 261
           I+T ++L+ NM+PPK+
Sbjct: 153 ISTVISLIGNMSPPKK 168


>ref|NP_568761.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758193|dbj|BAB08667.1| unnamed protein product
           [Arabidopsis thaliana] gi|21554099|gb|AAM63179.1|
           unknown [Arabidopsis thaliana]
           gi|26452693|dbj|BAC43429.1| unknown protein [Arabidopsis
           thaliana] gi|28973527|gb|AAO64088.1| unknown protein
           [Arabidopsis thaliana] gi|332008709|gb|AED96092.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 170

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
 Frame = -2

Query: 653 KARFRTVFIMQGVIQIVGVLGAFFFPTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHVT 474
           KAR R +  +Q  I ++G+  AF   TK    NTL IAA + GL+  +IG+    RS V 
Sbjct: 36  KARLRPLIFVQAAIYVIGLSCAFLTTTKKDEKNTLAIAAAVAGLVCSLIGELGCRRSRVN 95

Query: 473 LLSIYCVLSSLATVFCLACTTMN--TFHTHIPEEMQQKAEIFAYMHIVIGAMVEMYQINT 300
           LL +Y   S++  V  + C   +  T           K E+  ++   +GA+V++  I  
Sbjct: 96  LLRLYTAASTIVMVLSVFCAVRSRLTMEERNSSGTTAKLELAGFICAQLGAVVQILAIIV 155

Query: 299 SMNLMHNMAPPKR 261
           + +L++NM+PP +
Sbjct: 156 TGSLVNNMSPPTK 168


>ref|XP_002318883.1| predicted protein [Populus trichocarpa] gi|222859556|gb|EEE97103.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
 Frame = -2

Query: 656 GKARFRTVFIMQGVIQIVGVLGAFFFPTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHV 477
           GK+R + +  +QG+ Q++ +L      +K    N L +++ ++GL+ ++IG+    RS  
Sbjct: 33  GKSRLKALIFIQGIFQLIELLYVVLPISKGKDPNILAVSSSVIGLISLLIGELGRRRSRA 92

Query: 476 TLLSIYCVLSSLATVFCLACTTMNTFHTHI---PEEMQ-QKAEIFAYMHIVIGAMVEMYQ 309
             L  Y  +S++A +  + C   ++    +   P E + QK E+     +++G +V+M+ 
Sbjct: 93  GFLRFYLAMSTIAVLLSIFCAVSSSSTLEVIQNPAEWETQKFELIETSVLLLGLLVQMFT 152

Query: 308 INTSMNLMHNMAPPKR 261
           I T ++L+ NM+PPK+
Sbjct: 153 IGTVISLISNMSPPKK 168


>ref|XP_002864115.1| hypothetical protein ARALYDRAFT_495223 [Arabidopsis lyrata subsp.
           lyrata] gi|297309950|gb|EFH40374.1| hypothetical protein
           ARALYDRAFT_495223 [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
 Frame = -2

Query: 653 KARFRTVFIMQGVIQIVGVLGAFFFPTKDGFFNTLQIAAFILGLMFIVIGKTAVGRSHVT 474
           KAR R +  +Q  I +VG+  AF   TK    NTL IAA   GL+   IG+    RS V 
Sbjct: 36  KARLRPLIFVQAAIYLVGLSCAFLTTTKKDERNTLAIAAAAAGLVSSFIGELGCRRSRVN 95

Query: 473 LLSIYCVLSSLATVFCLACTTMN--TFHTHIPEEMQQKAEIFAYMHIVIGAMVEMYQINT 300
           LL +Y   S++  V  + C   +  T           K E+  ++   +GA+V++  I  
Sbjct: 96  LLRLYTAASTIVMVLSVFCAVRSRLTMEERNSTGTTAKLELAGFICAQLGAVVQILVIIV 155

Query: 299 SMNLMHNMAPPKR 261
           + +L++NM+PP +
Sbjct: 156 TGSLVNNMSPPTK 168


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