BLASTX nr result

ID: Coptis23_contig00005356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005356
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267281.2| PREDICTED: uncharacterized protein LOC100262...   395   e-107
emb|CBI35458.3| unnamed protein product [Vitis vinifera]              392   e-106
ref|XP_002533448.1| conserved hypothetical protein [Ricinus comm...   390   e-106
ref|XP_002329701.1| predicted protein [Populus trichocarpa] gi|1...   389   e-105
ref|NP_566588.1| uncharacterized protein [Arabidopsis thaliana] ...   385   e-104

>ref|XP_002267281.2| PREDICTED: uncharacterized protein LOC100262899 [Vitis vinifera]
          Length = 419

 Score =  395 bits (1014), Expect = e-107
 Identities = 213/293 (72%), Positives = 240/293 (81%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1295 KEEPSPAGTDLVLYRRIAEVKANERKKALEEILYALVVQKFMDADVSLIPSIAPSSHPSG 1116
            KEE S +GT+LVLYRRIAEVKANERKKALEEILYALVVQKFMDA+VSLIP+I+ SS  S 
Sbjct: 128  KEESSASGTELVLYRRIAEVKANERKKALEEILYALVVQKFMDANVSLIPTISSSSSDSS 187

Query: 1115 -KVDTWPNXXXXXXXLHSQEAFEMIKNHLALILGTRLGDSTSVAQISKLRVGQVYAASVM 939
             +VDTWP+       LHS EA+EMI+NHLALILG RLGDSTSVAQISKLRVGQVYAASVM
Sbjct: 188  DRVDTWPSQDGKLEQLHSPEAYEMIQNHLALILGNRLGDSTSVAQISKLRVGQVYAASVM 247

Query: 938  YGYFLKRVDQRFQLEKSMKVLPFGSDDEDNDIVQSVSEEMSRDTESLRNAEQSTPHPEVX 759
            YGYFLKRVDQRFQLEK+MK+LP   D +   + +++ ++M+  + S  + +    HPEV 
Sbjct: 248  YGYFLKRVDQRFQLEKTMKILPHALDGDKGSVQEALWDKMT-PSGSDDSVQTVKSHPEVS 306

Query: 758  XXXXXXXXXXXXXGIKSSKLRTYVMSFDSETLQKYATIRSKEAVSIIEKHTEALFGRPEI 579
                         GIK S+LR YVMSFD+ETLQ+YATIRSKEAVSIIEKHTEALFGRPEI
Sbjct: 307  SWAGGFTPGGFGHGIKPSRLRNYVMSFDAETLQRYATIRSKEAVSIIEKHTEALFGRPEI 366

Query: 578  VITPQGTIDSAKDELIKISFGGLKRLVLEAVTFGSFLWDVESHVDSRYHFVTN 420
            +ITPQGTIDS+KDELIKISFGGLKRLVLEAVTFGSFLWDVES VDSRYHFV N
Sbjct: 367  IITPQGTIDSSKDELIKISFGGLKRLVLEAVTFGSFLWDVESFVDSRYHFVIN 419


>emb|CBI35458.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  392 bits (1006), Expect = e-106
 Identities = 214/293 (73%), Positives = 236/293 (80%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1295 KEEPSPAGTDLVLYRRIAEVKANERKKALEEILYALVVQKFMDADVSLIPSIAPSSHPSG 1116
            KEE S +GT+LVLYRRIAEVKANERKKALEEILYALVVQKFMDA+VSLIP+I+ SS  S 
Sbjct: 128  KEESSASGTELVLYRRIAEVKANERKKALEEILYALVVQKFMDANVSLIPTISSSSSDSS 187

Query: 1115 -KVDTWPNXXXXXXXLHSQEAFEMIKNHLALILGTRLGDSTSVAQISKLRVGQVYAASVM 939
             +VDTWP+       LHS EA+EMI+NHLALILG RLGDSTSVAQISKLRVGQVYAASVM
Sbjct: 188  DRVDTWPSQDGKLEQLHSPEAYEMIQNHLALILGNRLGDSTSVAQISKLRVGQVYAASVM 247

Query: 938  YGYFLKRVDQRFQLEKSMKVLPFGSDDEDNDIVQSVSEEMSRDTESLRNAEQSTPHPEVX 759
            YGYFLKRVDQRFQLEK+MK+LP   D +      SV E      +++++      HPEV 
Sbjct: 248  YGYFLKRVDQRFQLEKTMKILPHALDGDKG----SVQEAFDDSVQTVKS------HPEVS 297

Query: 758  XXXXXXXXXXXXXGIKSSKLRTYVMSFDSETLQKYATIRSKEAVSIIEKHTEALFGRPEI 579
                         GIK S+LR YVMSFD+ETLQ+YATIRSKEAVSIIEKHTEALFGRPEI
Sbjct: 298  SWAGGFTPGGFGHGIKPSRLRNYVMSFDAETLQRYATIRSKEAVSIIEKHTEALFGRPEI 357

Query: 578  VITPQGTIDSAKDELIKISFGGLKRLVLEAVTFGSFLWDVESHVDSRYHFVTN 420
            +ITPQGTIDS+KDELIKISFGGLKRLVLEAVTFGSFLWDVES VDSRYHFV N
Sbjct: 358  IITPQGTIDSSKDELIKISFGGLKRLVLEAVTFGSFLWDVESFVDSRYHFVIN 410


>ref|XP_002533448.1| conserved hypothetical protein [Ricinus communis]
            gi|223526697|gb|EEF28932.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 392

 Score =  390 bits (1002), Expect = e-106
 Identities = 211/293 (72%), Positives = 232/293 (79%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1295 KEEPSPAGTDLVLYRRIAEVKANERKKALEEILYALVVQKFMDADVSLIPSIAPSS-HPS 1119
            KEEPS +GTDLVLYRRIAEVKANER+KALEEILYALVVQKFMDA+VSL+PSIAP+S  PS
Sbjct: 128  KEEPSVSGTDLVLYRRIAEVKANERRKALEEILYALVVQKFMDANVSLVPSIAPASAEPS 187

Query: 1118 GKVDTWPNXXXXXXXLHSQEAFEMIKNHLALILGTRLGDSTSVAQISKLRVGQVYAASVM 939
              VD WP        LHS EA+EMI+NHLALILG R+GDST+VAQISKLRVGQVYAASVM
Sbjct: 188  DPVDMWPRQDEKLERLHSPEAYEMIQNHLALILGNRVGDSTTVAQISKLRVGQVYAASVM 247

Query: 938  YGYFLKRVDQRFQLEKSMKVLPFGSDDEDNDIVQSVSEEMSRDTESLRNAEQSTPHPEVX 759
            YGYFLKRVDQRFQLEKSMK+LP   D+ DN++  S                         
Sbjct: 248  YGYFLKRVDQRFQLEKSMKILPSAVDEGDNNVAWS------------------------- 282

Query: 758  XXXXXXXXXXXXXGIKSSKLRTYVMSFDSETLQKYATIRSKEAVSIIEKHTEALFGRPEI 579
                         GIK+S+LR+YVMSFD ETLQ+YATIRSKEAVSIIEKHTEALFGRPEI
Sbjct: 283  ---GDVSAGGFGHGIKASRLRSYVMSFDGETLQRYATIRSKEAVSIIEKHTEALFGRPEI 339

Query: 578  VITPQGTIDSAKDELIKISFGGLKRLVLEAVTFGSFLWDVESHVDSRYHFVTN 420
            +ITPQGT+DS+KDELIKISFGGLKRLVLEAVTFGSFLWDVES+VDSRYHFVTN
Sbjct: 340  IITPQGTVDSSKDELIKISFGGLKRLVLEAVTFGSFLWDVESYVDSRYHFVTN 392


>ref|XP_002329701.1| predicted protein [Populus trichocarpa] gi|118488671|gb|ABK96147.1|
            unknown [Populus trichocarpa] gi|222870609|gb|EEF07740.1|
            predicted protein [Populus trichocarpa]
          Length = 417

 Score =  389 bits (998), Expect = e-105
 Identities = 205/293 (69%), Positives = 238/293 (81%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1295 KEEPSPAGTDLVLYRRIAEVKANERKKALEEILYALVVQKFMDADVSLIPSIAPSS-HPS 1119
            KE+PS  GTDLVLYRRIAE KAN+R+KALEEILYALVVQKFMDA+VSLIP+I PSS   S
Sbjct: 128  KEDPSATGTDLVLYRRIAEAKANDRRKALEEILYALVVQKFMDANVSLIPTIGPSSAESS 187

Query: 1118 GKVDTWPNXXXXXXXLHSQEAFEMIKNHLALILGTRLGDSTSVAQISKLRVGQVYAASVM 939
            G+VDTWP+       LHS EA+EMI+NHL LILG R+GDST+VAQISKLR+GQVYAASVM
Sbjct: 188  GQVDTWPSQDEKLEQLHSPEAYEMIQNHLTLILGNRVGDSTAVAQISKLRIGQVYAASVM 247

Query: 938  YGYFLKRVDQRFQLEKSMKVLPFGSDDEDNDIVQSVSEEMSRDTESLRNAEQSTPHPEVX 759
            YGYFLKRVDQRFQLEK+MK+LP G D+ ++DI ++V +++      L     S+ HPE  
Sbjct: 248  YGYFLKRVDQRFQLEKTMKILPNGVDETESDIHKAVGQDVKPGGRGLSYQALSS-HPEAI 306

Query: 758  XXXXXXXXXXXXXGIKSSKLRTYVMSFDSETLQKYATIRSKEAVSIIEKHTEALFGRPEI 579
                          +K+S+LR YVMSFD+ETLQ+YATIRSKEAVSIIEKHTEALFGRPEI
Sbjct: 307  SGGISPGGFGHG--LKASRLRNYVMSFDAETLQRYATIRSKEAVSIIEKHTEALFGRPEI 364

Query: 578  VITPQGTIDSAKDELIKISFGGLKRLVLEAVTFGSFLWDVESHVDSRYHFVTN 420
            VITPQGTID++KDE++ IS GGLKRL LEAVTFGSFLWDVES+VDSRYHFV N
Sbjct: 365  VITPQGTIDTSKDEVVTISLGGLKRLALEAVTFGSFLWDVESYVDSRYHFVLN 417


>ref|NP_566588.1| uncharacterized protein [Arabidopsis thaliana]
            gi|9294484|dbj|BAB02703.1| unnamed protein product
            [Arabidopsis thaliana] gi|20466177|gb|AAM20406.1| unknown
            protein [Arabidopsis thaliana]
            gi|332642487|gb|AEE76008.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 421

 Score =  385 bits (989), Expect = e-104
 Identities = 201/292 (68%), Positives = 232/292 (79%)
 Frame = -2

Query: 1295 KEEPSPAGTDLVLYRRIAEVKANERKKALEEILYALVVQKFMDADVSLIPSIAPSSHPSG 1116
            K+  S  GTD+VLYRRIAE+K NER++ LEEILYALVVQKFM+A+VSL+PS++PSS PSG
Sbjct: 138  KDSASVPGTDIVLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSG 197

Query: 1115 KVDTWPNXXXXXXXLHSQEAFEMIKNHLALILGTRLGDSTSVAQISKLRVGQVYAASVMY 936
            +VDTWP        LHS E +EMI NHLALILG+R+GD  SVAQISKLRVGQVYAASVMY
Sbjct: 198  RVDTWPTKVEKLERLHSPEMYEMIHNHLALILGSRMGDLNSVAQISKLRVGQVYAASVMY 257

Query: 935  GYFLKRVDQRFQLEKSMKVLPFGSDDEDNDIVQSVSEEMSRDTESLRNAEQSTPHPEVXX 756
            GYFLKRVDQRFQLEK+MK+LP GSD+         S E +  T + + A  S  HPEV  
Sbjct: 258  GYFLKRVDQRFQLEKTMKILPGGSDE------SKTSVEQAEGTATYQAAVSS--HPEVGA 309

Query: 755  XXXXXXXXXXXXGIKSSKLRTYVMSFDSETLQKYATIRSKEAVSIIEKHTEALFGRPEIV 576
                         IK S+LR+YVMSFD+ETLQ+YATIRS+EAV IIEKHTEALFG+PEIV
Sbjct: 310  FAGGVSAKGFGSEIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIV 369

Query: 575  ITPQGTIDSAKDELIKISFGGLKRLVLEAVTFGSFLWDVESHVDSRYHFVTN 420
            ITP+GT+DS+KDE IKISFGG+KRLVLEAVTFGSFLWDVESHVD+RYHFV N
Sbjct: 370  ITPEGTVDSSKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARYHFVLN 421


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