BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005353
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 com...   370   e-100
gb|ABK96051.1| unknown [Populus trichocarpa]                          352   1e-94
ref|XP_002300073.1| predicted protein [Populus trichocarpa] gi|2...   351   2e-94
ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 com...   349   7e-94
ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assemb...   346   8e-93

>ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Vitis vinifera] gi|296081322|emb|CBI17704.3| unnamed
           protein product [Vitis vinifera]
          Length = 328

 Score =  370 bits (949), Expect = e-100
 Identities = 187/271 (69%), Positives = 215/271 (79%), Gaps = 6/271 (2%)
 Frame = -2

Query: 960 DNNIFVK------TRDKTSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRTL 799
           D++I VK       R+ TSVTMPMSFMTGSIVGKRFYKQ +TRE++DGNGW VMLDYRTL
Sbjct: 57  DDSIHVKGPSSNPRRETTSVTMPMSFMTGSIVGKRFYKQASTREADDGNGWTVMLDYRTL 116

Query: 798 KTPSKRXXXXXXXXXXXXXXAEWEYQESDGIRPFMMPLMRLTCTALERVPLTRLKIIEHL 619
           KTPSKR              AEWEYQ++DGIRPF MPLM+L CTALERVPLTR+KIIE+L
Sbjct: 117 KTPSKRPLKLPTLSLAKAIAAEWEYQQTDGIRPFTMPLMKLACTALERVPLTRMKIIEYL 176

Query: 618 MKKFHQDLVFCRAPGDNVLTKGVLEKQVEKIDPVLNWVESEFGFKPVVYSTFFGGKQEDG 439
           MKKFHQDLVFCRAPGD+ LT GVLE+QVEKIDP+L WVES+FGFKP+VYS+FFGGKQEDG
Sbjct: 177 MKKFHQDLVFCRAPGDSDLTIGVLERQVEKIDPLLQWVESQFGFKPIVYSSFFGGKQEDG 236

Query: 438 LVHAIESFLKNTNDCELXXXXXXXXXAHSLVISIGMFRGRXXXXXXXXXXXXXEDLQVDR 259
           LV+AIE+ LK T+DCEL         AHSL I+IG+FRG+             EDLQVD+
Sbjct: 237 LVNAIENLLKKTDDCELAAIDAIASAAHSLTIAIGIFRGKLQIEEAIELIRLEEDLQVDK 296

Query: 258 WGLVEGGHDLDIADLKVQISSAAVFLGLSQK 166
           WGLVEGGHD+D+ADLKVQISSAA FLGLS++
Sbjct: 297 WGLVEGGHDVDVADLKVQISSAAAFLGLSRR 327


>gb|ABK96051.1| unknown [Populus trichocarpa]
          Length = 330

 Score =  352 bits (903), Expect = 1e-94
 Identities = 177/276 (64%), Positives = 210/276 (76%), Gaps = 10/276 (3%)
 Frame = -2

Query: 963 DDNNIFVKT----------RDKTSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVML 814
           +D+NI+++           +D +SVTMPMS MTGSIVGKRFYKQVTTRE++DGNGWNVML
Sbjct: 55  NDSNIYMRKGPPNCNVKGEKDSSSVTMPMSSMTGSIVGKRFYKQVTTREADDGNGWNVML 114

Query: 813 DYRTLKTPSKRXXXXXXXXXXXXXXAEWEYQESDGIRPFMMPLMRLTCTALERVPLTRLK 634
           DYRTLKTPSKR              AEW+YQ++DGIRPF MPLM+L CTAL+RVPLTR K
Sbjct: 115 DYRTLKTPSKRPLKLPTLALAKAIAAEWDYQQTDGIRPFTMPLMKLACTALDRVPLTRPK 174

Query: 633 IIEHLMKKFHQDLVFCRAPGDNVLTKGVLEKQVEKIDPVLNWVESEFGFKPVVYSTFFGG 454
           IIEHLMKKF QDLVFCRAP DNVLT GV E+QVEK DP++ W++SEFGFKPVV+S  FGG
Sbjct: 175 IIEHLMKKFSQDLVFCRAPEDNVLTSGVYERQVEKFDPLIGWIKSEFGFKPVVHSCLFGG 234

Query: 453 KQEDGLVHAIESFLKNTNDCELXXXXXXXXXAHSLVISIGMFRGRXXXXXXXXXXXXXED 274
           KQE+GLV AIE+ LK T+DC+L         AHSL+I++G+ +G+             ED
Sbjct: 235 KQEEGLVKAIENLLKQTDDCQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRLEED 294

Query: 273 LQVDRWGLVEGGHDLDIADLKVQISSAAVFLGLSQK 166
            QVD WGLVEGGHD+DIADL+VQISSAAVFLGLS+K
Sbjct: 295 FQVDTWGLVEGGHDIDIADLRVQISSAAVFLGLSRK 330


>ref|XP_002300073.1| predicted protein [Populus trichocarpa] gi|222847331|gb|EEE84878.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  351 bits (901), Expect = 2e-94
 Identities = 174/257 (67%), Positives = 202/257 (78%)
 Frame = -2

Query: 936 RDKTSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRTLKTPSKRXXXXXXXX 757
           +D +SVTMPMS MTGSIVGKRFYKQVTTRE++DGNGWNVMLDYRTLKTPSKR        
Sbjct: 14  KDSSSVTMPMSSMTGSIVGKRFYKQVTTREADDGNGWNVMLDYRTLKTPSKRPLKLPTLA 73

Query: 756 XXXXXXAEWEYQESDGIRPFMMPLMRLTCTALERVPLTRLKIIEHLMKKFHQDLVFCRAP 577
                 AEW+YQ++DGIRPF MPLM+L CTAL+RVPLTR KIIEHLMKKF QDLVFCRAP
Sbjct: 74  LAKAIAAEWDYQQTDGIRPFTMPLMKLACTALDRVPLTRPKIIEHLMKKFSQDLVFCRAP 133

Query: 576 GDNVLTKGVLEKQVEKIDPVLNWVESEFGFKPVVYSTFFGGKQEDGLVHAIESFLKNTND 397
            DNVLT GV E+QVEK DP++ W++SEFGFKPVV+S  FGGKQE+GLV AIE+ LK T+D
Sbjct: 134 EDNVLTSGVYERQVEKFDPLIGWIKSEFGFKPVVHSCLFGGKQEEGLVKAIENLLKQTDD 193

Query: 396 CELXXXXXXXXXAHSLVISIGMFRGRXXXXXXXXXXXXXEDLQVDRWGLVEGGHDLDIAD 217
           C+L         AHSL+I++G+ +G+             ED QVD WGLVEGGHD+DIAD
Sbjct: 194 CQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRLEEDFQVDTWGLVEGGHDIDIAD 253

Query: 216 LKVQISSAAVFLGLSQK 166
           L+VQISSAAVFLGLS+K
Sbjct: 254 LRVQISSAAVFLGLSRK 270


>ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cucumis sativus]
           gi|449492905|ref|XP_004159136.1| PREDICTED: ATP synthase
           mitochondrial F1 complex assembly factor 2-like [Cucumis
           sativus]
          Length = 330

 Score =  349 bits (896), Expect = 7e-94
 Identities = 177/272 (65%), Positives = 206/272 (75%), Gaps = 7/272 (2%)
 Frame = -2

Query: 960 DNNIFVK-------TRDKTSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRT 802
           D  +FVK       +R  +SVTMP SFMTGSIVGKRFY++VTTRE++D NGW VMLDYRT
Sbjct: 58  DEPVFVKAPRSNSSSRSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDRNGWAVMLDYRT 117

Query: 801 LKTPSKRXXXXXXXXXXXXXXAEWEYQESDGIRPFMMPLMRLTCTALERVPLTRLKIIEH 622
           LKTP+KR              AEWEYQE+DGIRPF MPLM+L CTALERVPLTR  IIEH
Sbjct: 118 LKTPTKRPLKLPTLGLAKAVAAEWEYQETDGIRPFTMPLMKLACTALERVPLTRHTIIEH 177

Query: 621 LMKKFHQDLVFCRAPGDNVLTKGVLEKQVEKIDPVLNWVESEFGFKPVVYSTFFGGKQED 442
           L+KKF+ DLVFCRAP +NVLT GV E+QVEKIDP+L+WV SEFGFKP+VYS+FFGG QED
Sbjct: 178 LIKKFNSDLVFCRAPEENVLTSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSFFGGNQED 237

Query: 441 GLVHAIESFLKNTNDCELXXXXXXXXXAHSLVISIGMFRGRXXXXXXXXXXXXXEDLQVD 262
           GL+ A+E  LK TNDCEL         AHSL+I+IG+FRG+             EDLQVD
Sbjct: 238 GLIKAVEDLLKKTNDCELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDLQVD 297

Query: 261 RWGLVEGGHDLDIADLKVQISSAAVFLGLSQK 166
           +WGLVEGGHD+DIADL+VQISSA VFL LS++
Sbjct: 298 KWGLVEGGHDVDIADLQVQISSATVFLALSRR 329


>ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor, putative [Ricinus communis]
           gi|223533694|gb|EEF35429.1| ATP synthase mitochondrial
           F1 complex assembly factor 2, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 334

 Score =  346 bits (887), Expect = 8e-93
 Identities = 177/253 (69%), Positives = 203/253 (80%)
 Frame = -2

Query: 927 TSVTMPMSFMTGSIVGKRFYKQVTTRESEDGNGWNVMLDYRTLKTPSKRXXXXXXXXXXX 748
           +SVTMPMSFMTGSIVGKRFYK+VTTRE++DG G+ VMLDYRTLKTPSK+           
Sbjct: 81  SSVTMPMSFMTGSIVGKRFYKKVTTREADDGIGYTVMLDYRTLKTPSKKPLKLPTLSLAK 140

Query: 747 XXXAEWEYQESDGIRPFMMPLMRLTCTALERVPLTRLKIIEHLMKKFHQDLVFCRAPGDN 568
              AEW+ Q++DGIRPF MPLM+L CTALERVPLTRLKIIE+LMKKF+QDLVFCRAP DN
Sbjct: 141 AIAAEWDCQQTDGIRPFTMPLMKLACTALERVPLTRLKIIENLMKKFNQDLVFCRAPEDN 200

Query: 567 VLTKGVLEKQVEKIDPVLNWVESEFGFKPVVYSTFFGGKQEDGLVHAIESFLKNTNDCEL 388
            LT GV E+QVEKIDP+L+WV+SEFGFKPVVYS+FFGGKQE+GLV AIE  LK T++CEL
Sbjct: 201 DLTSGVYERQVEKIDPLLDWVKSEFGFKPVVYSSFFGGKQEEGLVKAIEDLLKKTDNCEL 260

Query: 387 XXXXXXXXXAHSLVISIGMFRGRXXXXXXXXXXXXXEDLQVDRWGLVEGGHDLDIADLKV 208
                    AHSLVI+IG+ RG+             EDLQVDRWGLVEGGHD+DIADL+V
Sbjct: 261 AAIDAIAASAHSLVIAIGIVRGKLDIEEAIQLIRLEEDLQVDRWGLVEGGHDIDIADLRV 320

Query: 207 QISSAAVFLGLSQ 169
           QISSAAVFLGLS+
Sbjct: 321 QISSAAVFLGLSR 333