BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005343
         (1548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236519.1| uncharacterized protein LOC100306544 [Glycin...   295   2e-77
ref|NP_001234977.1| uncharacterized protein LOC100499970 [Glycin...   295   2e-77
ref|NP_200682.1| nudC domain-containing protein [Arabidopsis tha...   293   8e-77
ref|XP_002866289.1| nuclear movement family protein [Arabidopsis...   291   3e-76
ref|XP_004151457.1| PREDICTED: nudC domain-containing protein 2-...   290   5e-76

>ref|NP_001236519.1| uncharacterized protein LOC100306544 [Glycine max]
            gi|255628837|gb|ACU14763.1| unknown [Glycine max]
          Length = 158

 Score =  295 bits (755), Expect = 2e-77
 Identities = 136/158 (86%), Positives = 148/158 (93%)
 Frame = -2

Query: 1178 MAEKLAPEKRHSFIHEGQKVFEWDQTLDEVNMYINLPSNVPRKLFTCKIQSKHVEVGIKG 999
            MAEKLAPEKRHSF+H GQKVFEWDQTLDEVN+YI LP NV  K F CKIQSKH+E+GIKG
Sbjct: 1    MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 998  NPPYLNHDLTSHVKTDSSFWTIEDDILHVTLQKREKGQTWVSPISGQGQLDPYASDLEQK 819
            NPPYLNHDLTS VKTDSSFWT+EDDI+H+TLQKR+KGQTW SPI GQGQLDPYA+DLEQK
Sbjct: 61   NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 818  RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRNN 705
            RLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR++
Sbjct: 121  RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRSD 158


>ref|NP_001234977.1| uncharacterized protein LOC100499970 [Glycine max]
            gi|255628127|gb|ACU14408.1| unknown [Glycine max]
          Length = 158

 Score =  295 bits (755), Expect = 2e-77
 Identities = 136/158 (86%), Positives = 148/158 (93%)
 Frame = -2

Query: 1178 MAEKLAPEKRHSFIHEGQKVFEWDQTLDEVNMYINLPSNVPRKLFTCKIQSKHVEVGIKG 999
            MAEKLAPEKRH F+H GQKVFEWDQTLDEVN+YI LP NV  K F CKIQSKH+E+GIKG
Sbjct: 1    MAEKLAPEKRHGFVHNGQKVFEWDQTLDEVNIYIALPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 998  NPPYLNHDLTSHVKTDSSFWTIEDDILHVTLQKREKGQTWVSPISGQGQLDPYASDLEQK 819
            NPPYLNHDLTS VKTDSSFWT+EDDI+H+TLQKR+KGQTW SPISGQGQLDPYA+DLEQK
Sbjct: 61   NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPISGQGQLDPYATDLEQK 120

Query: 818  RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRNN 705
            RLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR++
Sbjct: 121  RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRSD 158


>ref|NP_200682.1| nudC domain-containing protein [Arabidopsis thaliana]
            gi|18389274|gb|AAL67080.1| unknown protein [Arabidopsis
            thaliana] gi|21436159|gb|AAM51326.1| unknown protein
            [Arabidopsis thaliana] gi|332009710|gb|AED97093.1| nudC
            domain-containing protein [Arabidopsis thaliana]
          Length = 158

 Score =  293 bits (750), Expect = 8e-77
 Identities = 136/158 (86%), Positives = 146/158 (92%)
 Frame = -2

Query: 1178 MAEKLAPEKRHSFIHEGQKVFEWDQTLDEVNMYINLPSNVPRKLFTCKIQSKHVEVGIKG 999
            MAEKLAPEKRH FIH GQKVFEWDQTL+EVNMYI LP NV  K F CKIQSKH+EVGIKG
Sbjct: 1    MAEKLAPEKRHDFIHNGQKVFEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKG 60

Query: 998  NPPYLNHDLTSHVKTDSSFWTIEDDILHVTLQKREKGQTWVSPISGQGQLDPYASDLEQK 819
            NPPYLNHDL++ VKTD SFWT+EDDI+H+TLQKREKGQTW SPI GQGQLDPYA+DLEQK
Sbjct: 61   NPPYLNHDLSAPVKTDCSFWTLEDDIMHITLQKREKGQTWASPILGQGQLDPYATDLEQK 120

Query: 818  RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRNN 705
            RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR++
Sbjct: 121  RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRSD 158


>ref|XP_002866289.1| nuclear movement family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297312124|gb|EFH42548.1| nuclear movement family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score =  291 bits (745), Expect = 3e-76
 Identities = 134/158 (84%), Positives = 146/158 (92%)
 Frame = -2

Query: 1178 MAEKLAPEKRHSFIHEGQKVFEWDQTLDEVNMYINLPSNVPRKLFTCKIQSKHVEVGIKG 999
            MAEKLAPEKRH FIH GQKVFEWDQTL+EVN+YI LP NV  K F CKIQSKH+EVGIKG
Sbjct: 1    MAEKLAPEKRHDFIHNGQKVFEWDQTLEEVNLYITLPPNVHLKAFHCKIQSKHIEVGIKG 60

Query: 998  NPPYLNHDLTSHVKTDSSFWTIEDDILHVTLQKREKGQTWVSPISGQGQLDPYASDLEQK 819
            NPPYLNHDL++ VKTD SFWT+EDDI+H+TLQKREKGQTW SPI GQGQLDPYA+DLEQK
Sbjct: 61   NPPYLNHDLSAPVKTDCSFWTLEDDIMHITLQKREKGQTWASPILGQGQLDPYATDLEQK 120

Query: 818  RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIRNN 705
            RLMLQRFQEENPGFDFSQAQF+GNCPDPRSFMGGIR++
Sbjct: 121  RLMLQRFQEENPGFDFSQAQFTGNCPDPRSFMGGIRSD 158


>ref|XP_004151457.1| PREDICTED: nudC domain-containing protein 2-like [Cucumis sativus]
          Length = 156

 Score =  290 bits (743), Expect = 5e-76
 Identities = 133/156 (85%), Positives = 146/156 (93%)
 Frame = -2

Query: 1178 MAEKLAPEKRHSFIHEGQKVFEWDQTLDEVNMYINLPSNVPRKLFTCKIQSKHVEVGIKG 999
            MAEKLAPEKRHSF+H GQ+VFEWDQTL+EVN+YINLP NV  K F CKIQS+HVE+GIKG
Sbjct: 1    MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVELGIKG 60

Query: 998  NPPYLNHDLTSHVKTDSSFWTIEDDILHVTLQKREKGQTWVSPISGQGQLDPYASDLEQK 819
            NPPYLNH+LT  VKTDSSFWT+EDDI+H+TLQKR+KGQTW SPI GQGQLDPY+SDLEQK
Sbjct: 61   NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 818  RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR 711
            RLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGGIR
Sbjct: 121  RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156