BLASTX nr result

ID: Coptis23_contig00005333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005333
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   138   9e-31
ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...   119   4e-25
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]   119   4e-25
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]     117   2e-24

>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score =  138 bits (348), Expect = 9e-31
 Identities = 63/110 (57%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
 Frame = +3

Query: 3   GFRYNCSTCNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTKGFSCDICQKLGSNRWL 182
           GF Y+C+ C+ D H  CA  P SL +Q HPH L L F+PPY TKGFSCDICQK+GSN WL
Sbjct: 99  GFGYHCNHCSFDIHTTCAQNPLSLTNQFHPHLLQLTFDPPYHTKGFSCDICQKIGSNHWL 158

Query: 183 YRCNACDFDVHLNCA-----TTKPRVSEIQHQITVPQPQPPLKNHNSFPG 317
           YRC  C+FD HL CA         ++S+ Q Q   PQPQP L++HNSFPG
Sbjct: 159 YRCAPCEFDAHLECAMGAVPVAAQQLSQYQPQ-PQPQPQPQLQHHNSFPG 207



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   GFRYNCSTCNLDFHILCAAMPPSLRHQAHP-HSLNLAFNPPYQTKGFSCDICQKLGSNRW 179
           G+ Y+C+ CN   H+ C+ +P  + H +HP H+L+L  +P Y    FSCD C   G   +
Sbjct: 42  GWMYSCNPCNFTLHLSCSQLPSLITHPSHPNHTLDLLPSPIYPNGVFSCDACGH-GGLGF 100

Query: 180 LYRCNACDFDVHLNCA 227
            Y CN C FD+H  CA
Sbjct: 101 GYHCNHCSFDIHTTCA 116


>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  134 bits (338), Expect = 1e-29
 Identities = 55/93 (59%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   GFRYNCSTCNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTKGFSCDICQKLGSNRWL 182
           GF Y+C+TC+ D H++CA  P SL HQ+HPH LNLAF PPYQTKGFSCDIC K+GSN WL
Sbjct: 98  GFNYHCTTCDFDVHMMCATNPLSLAHQSHPHQLNLAFYPPYQTKGFSCDICHKIGSNHWL 157

Query: 183 YRCNACDFDVHLNCA--TTKPRVSEIQHQITVP 275
           YRC+AC+FD H+ CA       +  +QH  ++P
Sbjct: 158 YRCSACEFDAHMKCAMSVNNTPLPHVQHSNSLP 190



 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   GFRYNCSTCNLDFHILCAAMPPSLRHQAHP-HSLNLAFNPPYQTKGFSCDICQKLGSNRW 179
           G+ Y+C  CN   HI C  MP  + H  HP H L L   P Y    F+CD C  L  N +
Sbjct: 41  GWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPGGSFNCDGC-GLQGNGF 99

Query: 180 LYRCNACDFDVHLNCATTKPRVSEIQH 260
            Y C  CDFDVH+ CAT    ++   H
Sbjct: 100 NYHCTTCDFDVHMMCATNPLSLAHQSH 126


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score =  119 bits (299), Expect = 4e-25
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = +3

Query: 3   GFRYNCSTCNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTKGFSCDICQKLGSNRWL 182
           GF Y+C  CN+D HILCA+ P  L HQ+H H L L+F+PPY  K FSCDIC+++G++ WL
Sbjct: 103 GFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNKSFSCDICRQIGTSHWL 162

Query: 183 YRCNACDFDVHLNCATTKP 239
           YRC+ C+FD HL+CAT  P
Sbjct: 163 YRCDECEFDAHLSCATATP 181


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score =  119 bits (299), Expect = 4e-25
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = +3

Query: 3   GFRYNCSTCNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTKGFSCDICQKLGSNRWL 182
           GF Y+C  CN+D HILCA+ P  L HQ+H H L L+F+PPY  K FSCDIC+++G++ WL
Sbjct: 109 GFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNKSFSCDICRQIGTSHWL 168

Query: 183 YRCNACDFDVHLNCATTKP 239
           YRC+ C+FD HL+CAT  P
Sbjct: 169 YRCDECEFDAHLSCATATP 187


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score =  117 bits (294), Expect = 2e-24
 Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   GFRYNCSTCNLDFHILCAAMPPSLRHQAHPHSLNLAFNPPYQTKGFSCDICQKLGSNRWL 182
           GF Y+C TC  D HILCA  P  + H +H H L+L F+PPY  K F CDIC+K+G+N WL
Sbjct: 106 GFSYHCKTCGTDLHILCAVFPQCVTHWSHHHQLDLKFSPPYPGKSFCCDICKKVGTNHWL 165

Query: 183 YRCNACDFDVHLNCATTK--PRVSEIQHQITVPQPQPPLKNH 302
           YRC  C FD HLNC T +  P  S I    T  +  P  + H
Sbjct: 166 YRCQTCGFDAHLNCTTLQAPPHQSHIHQNPTTSRSAPQQQQH 207


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