BLASTX nr result

ID: Coptis23_contig00005332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005332
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...   124   1e-26
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]   124   1e-26
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   118   4e-25

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  127 bits (319), Expect = 9e-28
 Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
 Frame = +3

Query: 153 CDACWEHVKGFHYYCSSCDLVLHILCASMPPSVKHQSHSHPLKLTYNPPYQTKGFSCNIC 332
           CD C     GF+Y+C++CD  +H++CA+ P S+ HQSH H L L + PPYQTKGFSC+IC
Sbjct: 89  CDGCGLQGNGFNYHCTTCDFDVHMMCATNPLSLAHQSHPHQLNLAFYPPYQTKGFSCDIC 148

Query: 333 QKLGSKQWLYRCNACEFDAHLDCVTS--KPRVSEIQHQIRAP 452
            K+GS  WLYRC+ACEFDAH+ C  S     +  +QH    P
Sbjct: 149 HKIGSNHWLYRCSACEFDAHMKCAMSVNNTPLPHVQHSNSLP 190


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score =  124 bits (310), Expect = 1e-26
 Identities = 49/88 (55%), Positives = 64/88 (72%)
 Frame = +3

Query: 153 CDACWEHVKGFHYYCSSCDLVLHILCASMPPSVKHQSHSHPLKLTYNPPYQTKGFSCNIC 332
           CDAC +   GF Y+C  C++ LHILCAS P  + HQSH H L L+++PPY  K FSC+IC
Sbjct: 94  CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNKSFSCDIC 153

Query: 333 QKLGSKQWLYRCNACEFDAHLDCVTSKP 416
           +++G+  WLYRC+ CEFDAHL C T+ P
Sbjct: 154 RQIGTSHWLYRCDECEFDAHLSCATATP 181


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score =  124 bits (310), Expect = 1e-26
 Identities = 49/88 (55%), Positives = 64/88 (72%)
 Frame = +3

Query: 153 CDACWEHVKGFHYYCSSCDLVLHILCASMPPSVKHQSHSHPLKLTYNPPYQTKGFSCNIC 332
           CDAC +   GF Y+C  C++ LHILCAS P  + HQSH H L L+++PPY  K FSC+IC
Sbjct: 100 CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLALSFSPPYHNKSFSCDIC 159

Query: 333 QKLGSKQWLYRCNACEFDAHLDCVTSKP 416
           +++G+  WLYRC+ CEFDAHL C T+ P
Sbjct: 160 RQIGTSHWLYRCDECEFDAHLSCATATP 187


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  121 bits (304), Expect = 5e-26
 Identities = 50/96 (52%), Positives = 63/96 (65%)
 Frame = +3

Query: 153 CDACWEHVKGFHYYCSSCDLVLHILCASMPPSVKHQSHSHPLKLTYNPPYQTKGFSCNIC 332
           CDAC +   GF Y+C +C++ +H  CA+MP  + HQSH H L LT   PY    FSC++C
Sbjct: 94  CDACGKQGNGFSYHCGTCNIYIHTTCAAMPLVLTHQSHHHQLNLTPFAPYPNMSFSCDMC 153

Query: 333 QKLGSKQWLYRCNACEFDAHLDCVTSKPRVSEIQHQ 440
              GSKQWLYRCN C FDAHLDC  S+P  ++ Q Q
Sbjct: 154 HNFGSKQWLYRCNLCGFDAHLDCAVSQPNPAQAQAQ 189


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/104 (50%), Positives = 65/104 (62%)
 Frame = +3

Query: 144 IIICDACWEHVKGFHYYCSSCDLVLHILCASMPPSVKHQSHSHPLKLTYNPPYQTKGFSC 323
           +  CDAC     GF Y+C+ C   +H  CA  P S+ +Q H H L+LT++PPY TKGFSC
Sbjct: 87  VFSCDACGHGGLGFGYHCNHCSFDIHTTCAQNPLSLTNQFHPHLLQLTFDPPYHTKGFSC 146

Query: 324 NICQKLGSKQWLYRCNACEFDAHLDCVTSKPRVSEIQHQIRAPQ 455
           +ICQK+GS  WLYRC  CEFDAHL+C      V+  Q     PQ
Sbjct: 147 DICQKIGSNHWLYRCAPCEFDAHLECAMGAVPVAAQQLSQYQPQ 190


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