BLASTX nr result
ID: Coptis23_contig00005330
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00005330 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256... 63 3e-08 emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera] 63 3e-08 ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243... 55 5e-06 emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera] 55 5e-06 >ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|222841953|gb|EEE79500.1| predicted protein [Populus trichocarpa] Length = 822 Score = 63.2 bits (152), Expect = 2e-08 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 12/83 (14%) Frame = +1 Query: 118 ANRSAQVARSPPAVPVQLQAPGS--SFPMIVDGHRGVNTAH----------VARSNVLNE 261 A +AQ AR PP+VPVQ+Q G+ S+ DG R T V+ + L + Sbjct: 674 AQLAAQRARQPPSVPVQIQTSGAGASYLTSADGIRAPATEQRGNAGGALPAVSGTEGLVD 733 Query: 262 LPSDQNWRPAGRMRGALSGQAYS 330 L S+QNWRP GRMRG+LSG+AYS Sbjct: 734 LASEQNWRPTGRMRGSLSGRAYS 756 >ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256919 [Vitis vinifera] Length = 881 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 14/85 (16%) Frame = +1 Query: 118 ANRSAQVARSPPAVPVQLQAP--GSSFPMIVDGHRGVNTAHVARSNVLNE---------- 261 A ++ QV+RSPP+VPVQL+ G++F + + + + TA R N+L Sbjct: 722 AQQTVQVSRSPPSVPVQLRPARTGTAFSVGMVAEQ-LRTAGEQRRNILGTAWSTPRPDAS 780 Query: 262 --LPSDQNWRPAGRMRGALSGQAYS 330 LP+D+NWRP+GRMRG+L+G+AYS Sbjct: 781 AALPTDENWRPSGRMRGSLTGEAYS 805 >emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera] Length = 845 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 14/85 (16%) Frame = +1 Query: 118 ANRSAQVARSPPAVPVQLQAP--GSSFPMIVDGHRGVNTAHVARSNVLNE---------- 261 A ++ QV+RSPP+VPVQL+ G++F + + + + TA R N+L Sbjct: 683 AQQTVQVSRSPPSVPVQLRPARTGTAFSVGMVAEQ-LRTAGEQRRNILGTAWSTPRPDAS 741 Query: 262 --LPSDQNWRPAGRMRGALSGQAYS 330 LP+D+NWRP+GRMRG+L+G+AYS Sbjct: 742 AALPTDENWRPSGRMRGSLTGEAYS 766 >ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243215 [Vitis vinifera] Length = 920 Score = 55.5 bits (132), Expect = 5e-06 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 12/83 (14%) Frame = +1 Query: 118 ANRSAQVARSPPAVPVQLQAPGSSFPMIVDGHRGVNTAHVARSNV------------LNE 261 A R+AQ+ R P V Q GS+FP+ +G R +TA R N+ L + Sbjct: 765 AQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGR--STAGEQRGNIEGMVQAVSRPESLVD 822 Query: 262 LPSDQNWRPAGRMRGALSGQAYS 330 L S+QNWRP G MRG+L G+AY+ Sbjct: 823 LASEQNWRPTGLMRGSLVGRAYN 845 >emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera] Length = 901 Score = 55.5 bits (132), Expect = 5e-06 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 12/83 (14%) Frame = +1 Query: 118 ANRSAQVARSPPAVPVQLQAPGSSFPMIVDGHRGVNTAHVARSNV------------LNE 261 A R+AQ+ R P V Q GS+FP+ +G R +TA R N+ L + Sbjct: 746 AQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGR--STAGEQRGNIEGMVQAVSRPESLVD 803 Query: 262 LPSDQNWRPAGRMRGALSGQAYS 330 L S+QNWRP G MRG+L G+AY+ Sbjct: 804 LASEQNWRPTGLMRGSLVGRAYN 826