BLASTX nr result

ID: Coptis23_contig00005330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005330
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256...    63   3e-08
emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]    63   3e-08
ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243...    55   5e-06
emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]    55   5e-06

>ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|222841953|gb|EEE79500.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 12/83 (14%)
 Frame = +1

Query: 118 ANRSAQVARSPPAVPVQLQAPGS--SFPMIVDGHRGVNTAH----------VARSNVLNE 261
           A  +AQ AR PP+VPVQ+Q  G+  S+    DG R   T            V+ +  L +
Sbjct: 674 AQLAAQRARQPPSVPVQIQTSGAGASYLTSADGIRAPATEQRGNAGGALPAVSGTEGLVD 733

Query: 262 LPSDQNWRPAGRMRGALSGQAYS 330
           L S+QNWRP GRMRG+LSG+AYS
Sbjct: 734 LASEQNWRPTGRMRGSLSGRAYS 756


>ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256919 [Vitis vinifera]
          Length = 881

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 14/85 (16%)
 Frame = +1

Query: 118 ANRSAQVARSPPAVPVQLQAP--GSSFPMIVDGHRGVNTAHVARSNVLNE---------- 261
           A ++ QV+RSPP+VPVQL+    G++F + +   + + TA   R N+L            
Sbjct: 722 AQQTVQVSRSPPSVPVQLRPARTGTAFSVGMVAEQ-LRTAGEQRRNILGTAWSTPRPDAS 780

Query: 262 --LPSDQNWRPAGRMRGALSGQAYS 330
             LP+D+NWRP+GRMRG+L+G+AYS
Sbjct: 781 AALPTDENWRPSGRMRGSLTGEAYS 805


>emb|CAN73361.1| hypothetical protein VITISV_006165 [Vitis vinifera]
          Length = 845

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 14/85 (16%)
 Frame = +1

Query: 118 ANRSAQVARSPPAVPVQLQAP--GSSFPMIVDGHRGVNTAHVARSNVLNE---------- 261
           A ++ QV+RSPP+VPVQL+    G++F + +   + + TA   R N+L            
Sbjct: 683 AQQTVQVSRSPPSVPVQLRPARTGTAFSVGMVAEQ-LRTAGEQRRNILGTAWSTPRPDAS 741

Query: 262 --LPSDQNWRPAGRMRGALSGQAYS 330
             LP+D+NWRP+GRMRG+L+G+AYS
Sbjct: 742 AALPTDENWRPSGRMRGSLTGEAYS 766


>ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243215 [Vitis vinifera]
          Length = 920

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
 Frame = +1

Query: 118  ANRSAQVARSPPAVPVQLQAPGSSFPMIVDGHRGVNTAHVARSNV------------LNE 261
            A R+AQ+ R P  V  Q    GS+FP+  +G R  +TA   R N+            L +
Sbjct: 765  AQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGR--STAGEQRGNIEGMVQAVSRPESLVD 822

Query: 262  LPSDQNWRPAGRMRGALSGQAYS 330
            L S+QNWRP G MRG+L G+AY+
Sbjct: 823  LASEQNWRPTGLMRGSLVGRAYN 845


>emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]
          Length = 901

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
 Frame = +1

Query: 118 ANRSAQVARSPPAVPVQLQAPGSSFPMIVDGHRGVNTAHVARSNV------------LNE 261
           A R+AQ+ R P  V  Q    GS+FP+  +G R  +TA   R N+            L +
Sbjct: 746 AQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGR--STAGEQRGNIEGMVQAVSRPESLVD 803

Query: 262 LPSDQNWRPAGRMRGALSGQAYS 330
           L S+QNWRP G MRG+L G+AY+
Sbjct: 804 LASEQNWRPTGLMRGSLVGRAYN 826


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