BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005313
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-12
gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]                     56   3e-12
ref|XP_003599718.1| WD repeat-containing protein, putative [Medi...    55   5e-12
ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [C...    59   1e-11
ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communi...    57   1e-11

>ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1|
            predicted protein [Populus trichocarpa]
          Length = 1126

 Score = 58.9 bits (141), Expect(2) = 1e-12
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -3

Query: 205  LECLKQWVPQESSDPITHATYSFDSQSIYASF 110
            LECLKQW P+E+S PITHATYS DSQSIY SF
Sbjct: 999  LECLKQWFPREASGPITHATYSCDSQSIYVSF 1030



 Score = 38.5 bits (88), Expect(2) = 1e-12
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = -2

Query: 89   SLRLRCRIHPTAYIPSNISSNNSRVYPLV 3
            +LRLRCRI+ TAY+P N SS   RVYPLV
Sbjct: 1042 TLRLRCRINSTAYLPPNPSS--LRVYPLV 1068


>gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]
          Length = 1127

 Score = 55.8 bits (133), Expect(2) = 3e-12
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 205  LECLKQWVPQESSDPITHATYSFDSQSIYASF 110
            LEC+KQWVP+ESS PITHAT+S DSQ +YA F
Sbjct: 997  LECVKQWVPRESSAPITHATFSCDSQLVYACF 1028



 Score = 40.4 bits (93), Expect(2) = 3e-12
 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
 Frame = -2

Query: 128  VYICKLWGWQCWCS---LRLRCRIHPTAYIPSNISSNNSRVYPLV 3
            VY C L    C  S   L+LRCRI+P+AY+P+ +SSN   V+PLV
Sbjct: 1024 VYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSN---VHPLV 1065


>ref|XP_003599718.1| WD repeat-containing protein, putative [Medicago truncatula]
            gi|357468121|ref|XP_003604345.1| WD repeat-containing
            protein, putative [Medicago truncatula]
            gi|355488766|gb|AES69969.1| WD repeat-containing protein,
            putative [Medicago truncatula]
            gi|355505400|gb|AES86542.1| WD repeat-containing protein,
            putative [Medicago truncatula]
          Length = 1138

 Score = 55.1 bits (131), Expect(2) = 5e-12
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 205  LECLKQWVPQESSDPITHATYSFDSQSIYASF 110
            LECLKQW P++SS PI+HAT+S DSQ IYASF
Sbjct: 1006 LECLKQWAPRDSSAPISHATFSCDSQLIYASF 1037



 Score = 40.4 bits (93), Expect(2) = 5e-12
 Identities = 19/29 (65%), Positives = 25/29 (86%)
 Frame = -2

Query: 89   SLRLRCRIHPTAYIPSNISSNNSRVYPLV 3
            +LRLRCRI+P AY+P+++SS NS V PLV
Sbjct: 1049 NLRLRCRINPPAYLPASVSS-NSNVQPLV 1076


>ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [Cucumis sativus]
          Length = 1134

 Score = 59.3 bits (142), Expect(2) = 1e-11
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 205  LECLKQWVPQESSDPITHATYSFDSQSIYASF 110
            LECLKQWVP+E+S PITHAT+S DSQSIY SF
Sbjct: 1008 LECLKQWVPREASGPITHATFSCDSQSIYVSF 1039



 Score = 34.7 bits (78), Expect(2) = 1e-11
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -2

Query: 89   SLRLRCRIHPTAYIPSNISSNNSRVYPLV 3
            +LRLRCRI+P AY+ SN S    RV+PLV
Sbjct: 1051 TLRLRCRINPNAYLSSNPS---LRVHPLV 1076


>ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communis]
            gi|223533443|gb|EEF35191.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 1134

 Score = 56.6 bits (135), Expect(2) = 1e-11
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = -3

Query: 205  LECLKQWVPQESSDPITHATYSFDSQSIYASF 110
            LEC+KQW P ESS PITHATYS DSQ+IY SF
Sbjct: 1008 LECVKQWFPWESSGPITHATYSCDSQTIYVSF 1039



 Score = 37.4 bits (85), Expect(2) = 1e-11
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -2

Query: 89   SLRLRCRIHPTAYIPSNISSNNSRVYPLV 3
            +L LRCRI+PTAY+P N S    RVYPLV
Sbjct: 1051 TLALRCRINPTAYLPPNPS---LRVYPLV 1076