BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005309
         (2195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22695.3| unnamed protein product [Vitis vinifera]              452   e-124
ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis ...   452   e-124
ref|XP_003549036.1| PREDICTED: SKP1-like protein 21-like [Glycin...   430   e-118
ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumi...   429   e-117
ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus ...   429   e-117

>emb|CBI22695.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  452 bits (1162), Expect = e-124
 Identities = 235/343 (68%), Positives = 265/343 (77%), Gaps = 2/343 (0%)
 Frame = +1

Query: 394  MAIIKPEVMKSFVWLQTADGSIQQVEEEVAMFCPMICREVLQSGMGSSKNYAIPLPSRVN 573
            MA++KPE MKS++WLQTADGSIQQVEEEVAMFCPMICRE+LQ+GMGSSKNYAI LP RVN
Sbjct: 6    MAVVKPE-MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVN 64

Query: 574  PAILSLILDYCRFHQIPGRSNKERKSFDEKFIRIDTKRLCELTSAADSLQLKPLVDLTSR 753
            PAIL LILDYCRFHQ+PGRSNKERKSFDEKFIR+DTK+LCELTSAADSLQLKPLVDLTSR
Sbjct: 65   PAILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124

Query: 754  ALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNTADDPRIRLLNRLYAXXXXXXXXXX 933
            ALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN  DDPRIRLLNRLYA          
Sbjct: 125  ALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERE 184

Query: 934  XXXXXXXXXXPVDERSVDDLLSFINGGNGDXXXXXXXXXXXXXXXXXDQLKDHCSNNGNN 1113
                       VDERSVDDLLSFING +GD                 DQ+KD  SNN N 
Sbjct: 185  KLKNVEVEEERVDERSVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNG 244

Query: 1114 NH-EELDALSSKSHGDLNGNVFVASPSRTSKLRDVADDTYPPKL-XXXXXXXXXXXPAMK 1287
            +H +ELD + +  H      + V++PS+TSKL+++   T+ PKL            PAMK
Sbjct: 245  DHKKELDGVHTSCHNAEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMK 304

Query: 1288 EELDREVEDFARRLNSDWPQRVQEILSLGQERRSVPIAINGNG 1416
            E+LDREVEDFARRLNSDWP+R+QEILSLGQ+RR VPI++NGNG
Sbjct: 305  EQLDREVEDFARRLNSDWPERMQEILSLGQQRRLVPISMNGNG 347


>ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 359

 Score =  452 bits (1162), Expect = e-124
 Identities = 235/343 (68%), Positives = 265/343 (77%), Gaps = 2/343 (0%)
 Frame = +1

Query: 394  MAIIKPEVMKSFVWLQTADGSIQQVEEEVAMFCPMICREVLQSGMGSSKNYAIPLPSRVN 573
            MA++KPE MKS++WLQTADGSIQQVEEEVAMFCPMICRE+LQ+GMGSSKNYAI LP RVN
Sbjct: 6    MAVVKPE-MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVN 64

Query: 574  PAILSLILDYCRFHQIPGRSNKERKSFDEKFIRIDTKRLCELTSAADSLQLKPLVDLTSR 753
            PAIL LILDYCRFHQ+PGRSNKERKSFDEKFIR+DTK+LCELTSAADSLQLKPLVDLTSR
Sbjct: 65   PAILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124

Query: 754  ALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNTADDPRIRLLNRLYAXXXXXXXXXX 933
            ALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN  DDPRIRLLNRLYA          
Sbjct: 125  ALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERE 184

Query: 934  XXXXXXXXXXPVDERSVDDLLSFINGGNGDXXXXXXXXXXXXXXXXXDQLKDHCSNNGNN 1113
                       VDERSVDDLLSFING +GD                 DQ+KD  SNN N 
Sbjct: 185  KLKNVEVEEERVDERSVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNG 244

Query: 1114 NH-EELDALSSKSHGDLNGNVFVASPSRTSKLRDVADDTYPPKL-XXXXXXXXXXXPAMK 1287
            +H +ELD + +  H      + V++PS+TSKL+++   T+ PKL            PAMK
Sbjct: 245  DHKKELDGVHTSCHNAEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMK 304

Query: 1288 EELDREVEDFARRLNSDWPQRVQEILSLGQERRSVPIAINGNG 1416
            E+LDREVEDFARRLNSDWP+R+QEILSLGQ+RR VPI++NGNG
Sbjct: 305  EQLDREVEDFARRLNSDWPERMQEILSLGQQRRLVPISMNGNG 347


>ref|XP_003549036.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 376

 Score =  430 bits (1105), Expect = e-118
 Identities = 225/342 (65%), Positives = 254/342 (74%), Gaps = 1/342 (0%)
 Frame = +1

Query: 394  MAIIKPEVMKSFVWLQTADGSIQQVEEEVAMFCPMICREVLQSGMGSSKNYAIPLPSRVN 573
            MA++KPE+MKS++WLQT DGSIQQVEEEVAMFCPMIC+EVLQ+GMGSSKNYAI LP RVN
Sbjct: 6    MAVVKPEMMKSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKNYAISLPQRVN 65

Query: 574  PAILSLILDYCRFHQIPGRSNKERKSFDEKFIRIDTKRLCELTSAADSLQLKPLVDLTSR 753
            PAIL LILDYCRFHQ+PG SNKERK+FDEKFIR+DTK+LCELTSAADSLQLKPLVDLTSR
Sbjct: 66   PAILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 125

Query: 754  ALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNTADDPRIRLLNRLYAXXXXXXXXXX 933
            ALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN  DDPRIRLLNRLYA          
Sbjct: 126  ALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERK 185

Query: 934  XXXXXXXXXXPVDERSVDDLLSFINGGNGDXXXXXXXXXXXXXXXXXDQLKDHCSNNGNN 1113
                      P DERSV+DLLSFING +GD                 D  KD  S N N 
Sbjct: 186  KLKDVEVEEEPKDERSVEDLLSFINGADGDMKGTRTNKNKKKNRRRKDHAKDLSSKNENE 245

Query: 1114 NHEELDALSSKSHGDLNGNVFVASPSRTSKLRDVADDTYPPKL-XXXXXXXXXXXPAMKE 1290
            N ++L+ L S  H     N   AS S+ S+++++   ++ PK             PAMKE
Sbjct: 246  NDKDLNPLPSAYHNVYFDNALEASASKHSRMQNLPAISFSPKFEFIDGDVDDDLDPAMKE 305

Query: 1291 ELDREVEDFARRLNSDWPQRVQEILSLGQERRSVPIAINGNG 1416
            ELDREVEDFARRLNSDWP+R+Q ILSLGQ+RR VPI+IN NG
Sbjct: 306  ELDREVEDFARRLNSDWPERMQ-ILSLGQDRRLVPISINSNG 346


>ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumis sativus]
            gi|449524038|ref|XP_004169030.1| PREDICTED: SKP1-like
            protein 21-like [Cucumis sativus]
          Length = 425

 Score =  429 bits (1102), Expect = e-117
 Identities = 234/345 (67%), Positives = 256/345 (74%), Gaps = 4/345 (1%)
 Frame = +1

Query: 394  MAIIKPEVMKSFVWLQTADGSIQQVEEEVAMFCPMICREVLQSGMGSSKNYAIPLPSRVN 573
            MA++KPE MKS++WLQTADGSIQQVEEEVAMFCPMICRE+LQ+GMGSSKNYAI LP RVN
Sbjct: 6    MAVVKPE-MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVN 64

Query: 574  PAILSLILDYCRFHQIPGRSNKERKSFDEKFIRIDTKRLCELTSAADSLQLKPLVDLTSR 753
            PAIL LILDYCRFHQ+PGRSNKERK+FDEKFIR+DTK+LCELTSAADSLQLKPLVDLTSR
Sbjct: 65   PAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSR 124

Query: 754  ALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNTADDPRIRLLNRLYAXXXXXXXXXX 933
            ALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN  DDPRIRLLNRLYA          
Sbjct: 125  ALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELRERE 184

Query: 934  XXXXXXXXXXPVDERSVDDLLSFINGGNGDXXXXXXXXXXXXXXXXXDQLKDHCS---NN 1104
                       VD+RSVDDLLSFINGG+GD                 DQ KD  S    N
Sbjct: 185  KLKNVEIEER-VDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTTNEN 243

Query: 1105 GNNNHEELDALSSKSHGDLNGNVFVASPSRTSKLRDVADDTYPPKL-XXXXXXXXXXXPA 1281
            GN++  ELDAL S    +    +  ASPSRT K +D A   Y  K+            PA
Sbjct: 244  GNHDKIELDALPSCCQNNEFNQILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDDLDPA 303

Query: 1282 MKEELDREVEDFARRLNSDWPQRVQEILSLGQERRSVPIAINGNG 1416
            MKEELDREVEDFARRLNSDWP+RVQEILSLGQER  V + + GNG
Sbjct: 304  MKEELDREVEDFARRLNSDWPERVQEILSLGQERNLVTV-LTGNG 347


>ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547589|gb|EEF49084.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 378

 Score =  429 bits (1102), Expect = e-117
 Identities = 228/336 (67%), Positives = 251/336 (74%), Gaps = 3/336 (0%)
 Frame = +1

Query: 418  MKSFVWLQTADGSIQQVEEEVAMFCPMICREVLQSGMGSSKNYAIPLPSRVNPAILSLIL 597
            MKS++WLQTADGSIQQVEEEVAMFCPMICRE+LQ+GMGSSKNYAI LP RVNPAIL LIL
Sbjct: 1    MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60

Query: 598  DYCRFHQIPGRSNKERKSFDEKFIRIDTKRLCELTSAADSLQLKPLVDLTSRALARMIEG 777
            DYCRFHQ+PGRSNKERK+FDEKFIR+DTKRLCELTSAADSLQLKPLVDLTSRALAR+IEG
Sbjct: 61   DYCRFHQVPGRSNKERKTFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 120

Query: 778  KTPEEIRETFHLPDDLTEEEKLEPLRNTADDPRIRLLNRLYAXXXXXXXXXXXXXXXXXX 957
            KTPEEIRETFHLPDDLTEEEKLEPLRN  DDPRIRLLNRLYA                  
Sbjct: 121  KTPEEIRETFHLPDDLTEEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEREKMKNVEVE 180

Query: 958  XXPVDERSVDDLLSFINGGNGDXXXXXXXXXXXXXXXXXDQLKDHCSNNGNNNH-EELDA 1134
               VDERSVDDLLS+ING +GD                 DQ K+  SNN N NH ++ ++
Sbjct: 181  EERVDERSVDDLLSYINGADGDPKGGRTSKNKKKNRRRKDQSKESSSNNLNENHNKKTNS 240

Query: 1135 LSSKSHGDLNGNV--FVASPSRTSKLRDVADDTYPPKLXXXXXXXXXXXPAMKEELDREV 1308
              S  H   +G V   VASPS+TS+    A    P              PAMKEELDREV
Sbjct: 241  CPSACH---SGEVRDMVASPSKTSRQESGAASLSPKLEFDDADIDDDLDPAMKEELDREV 297

Query: 1309 EDFARRLNSDWPQRVQEILSLGQERRSVPIAINGNG 1416
            EDFARRLNSDWP+R+QEILSLGQERR VP+++NGNG
Sbjct: 298  EDFARRLNSDWPERMQEILSLGQERRLVPLSMNGNG 333