BLASTX nr result

ID: Coptis23_contig00005307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005307
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758...   175   1e-41
emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]   169   6e-40
ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204...   162   8e-38
ref|XP_002880964.1| hypothetical protein ARALYDRAFT_481720 [Arab...   161   2e-37
ref|XP_002527451.1| conserved hypothetical protein [Ricinus comm...   158   2e-36

>ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]
          Length = 196

 Score =  175 bits (444), Expect = 1e-41
 Identities = 97/165 (58%), Positives = 113/165 (68%), Gaps = 8/165 (4%)
 Frame = +1

Query: 271 AASFHG---RNQANQPILRRPKTDPDLLSNRKLAGMLSETMPKLTKLLLNVTIERSLGAV 441
           ++SFH       A Q  LRRPKT PDLLS R ++G+  E  P+LTKLLLNVT++RSLG V
Sbjct: 24  SSSFHSGIPMTMAPQAELRRPKTLPDLLSGRSVSGLSPEGGPRLTKLLLNVTVQRSLGPV 83

Query: 442 HVVMSPESTVGDLIAAAVRQYNNEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMKLG 621
            VVMSP+STVGDLIAA +RQY  EGRR  L TT+ + FDLHYS FSLESLDR EKLM LG
Sbjct: 84  QVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESLDRNEKLMTLG 143

Query: 622 SRNFFMCRTKA-----ADAAPITSAKCSSTCSIQVDKASKTPFEW 741
           SRNFF+C  K+       AA  +    SSTCS + DK SK    W
Sbjct: 144 SRNFFLCCKKSEPDVGESAAEASETTSSSTCSTEADKVSKISVPW 188


>emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]
          Length = 197

 Score =  169 bits (429), Expect = 6e-40
 Identities = 96/166 (57%), Positives = 113/166 (68%), Gaps = 9/166 (5%)
 Frame = +1

Query: 271 AASFHG---RNQANQPILRRPKTDPDLLSNRK-LAGMLSETMPKLTKLLLNVTIERSLGA 438
           ++SFH       A Q  LRRPKT PDLLS R+ ++G+  E  P+LTKLLLNVT++RSLG 
Sbjct: 24  SSSFHSGIPMTMAPQAELRRPKTLPDLLSGRRSVSGLSPEGGPRLTKLLLNVTVQRSLGP 83

Query: 439 VHVVMSPESTVGDLIAAAVRQYNNEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMKL 618
           V VVMSP+STVGDLIAA +RQY  EGRR  L TT+ + FDLHYS FSLESLDR EKLM L
Sbjct: 84  VQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESLDRNEKLMTL 143

Query: 619 GSRNFFMCRTKA-----ADAAPITSAKCSSTCSIQVDKASKTPFEW 741
           GSRNFF+C  K+       A   +    SSTCS + DK SK    W
Sbjct: 144 GSRNFFLCCKKSEPDVGESAXEASETTSSSTCSTEADKVSKISVPW 189


>ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204625 [Cucumis sativus]
           gi|449496238|ref|XP_004160081.1| PREDICTED:
           uncharacterized LOC101204625 [Cucumis sativus]
          Length = 187

 Score =  162 bits (411), Expect = 8e-38
 Identities = 88/165 (53%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
 Frame = +1

Query: 271 AASFHGRNQANQP-ILRRPKTDPDLLSNRKLAGMLS----ETMPKLTKLLLNVTIERSLG 435
           ++SFHG +      +LRRPKTDP+LLS + L    S    +  PK+TKLLLNVTI+ SLG
Sbjct: 16  SSSFHGESSTKTATMLRRPKTDPELLSFKNLGLSASAPSLDGRPKMTKLLLNVTIQGSLG 75

Query: 436 AVHVVMSPESTVGDLIAAAVRQYNNEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMK 615
            V V+MSPE TV DL++A VRQY  EGRRP L T + S FDLHYS FSLESL++EEKL+ 
Sbjct: 76  PVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYSQFSLESLNKEEKLIA 135

Query: 616 LGSRNFFMCRTKAADAAPITSAKCSSTCSIQVDKASK--TPFEWF 744
           LGSRNFF+C  K+ D   + ++  SS+CS +  +++K  + F WF
Sbjct: 136 LGSRNFFLCPKKSDDNNDLIASSSSSSCSKEAKESAKSSSSFSWF 180


>ref|XP_002880964.1| hypothetical protein ARALYDRAFT_481720 [Arabidopsis lyrata subsp.
           lyrata] gi|297326803|gb|EFH57223.1| hypothetical protein
           ARALYDRAFT_481720 [Arabidopsis lyrata subsp. lyrata]
          Length = 190

 Score =  161 bits (408), Expect = 2e-37
 Identities = 89/162 (54%), Positives = 111/162 (68%), Gaps = 5/162 (3%)
 Frame = +1

Query: 271 AASFHGRNQ---ANQPILRRPKTDPDLLSN-RKLAGMLSETMP-KLTKLLLNVTIERSLG 435
           A SFHGR     +N   LRRPKT P+L S  + + G ++E+ P +LTKLLLNVT++ SLG
Sbjct: 24  AMSFHGRGTTPVSNPGELRRPKTLPELFSTGQSITGPVTESFPPRLTKLLLNVTVQGSLG 83

Query: 436 AVHVVMSPESTVGDLIAAAVRQYNNEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMK 615
           AV +++SPESTV DLI AA+RQY  E RRPFL  +E S FDLHYS FSLES+ REEKL+ 
Sbjct: 84  AVQIIISPESTVSDLIDAAIRQYVKEARRPFLPESEPSRFDLHYSQFSLESIGREEKLIS 143

Query: 616 LGSRNFFMCRTKAADAAPITSAKCSSTCSIQVDKASKTPFEW 741
           LGSRNFF+C  K      I     S +CS + +K +KT F W
Sbjct: 144 LGSRNFFLCGRKETGGF-IGGGSSSESCSKEAEKVAKTGFHW 184


>ref|XP_002527451.1| conserved hypothetical protein [Ricinus communis]
           gi|223533186|gb|EEF34943.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  158 bits (399), Expect = 2e-36
 Identities = 93/160 (58%), Positives = 111/160 (69%), Gaps = 7/160 (4%)
 Frame = +1

Query: 271 AASFHGRNQANQPI--LRRPKTDPDLLSNRKLA--GMLSETMPKLTKLLLNVTIERSLGA 438
           A+SFHGR   + P   +RRP T PDLL  R L+  G   E  PKLTKLLLNVT++ S+GA
Sbjct: 28  ASSFHGRIPVDAPEARIRRPNTLPDLLGGRSLSAGGASMEARPKLTKLLLNVTVQGSVGA 87

Query: 439 VHVVMSPESTVGDLIAAAVRQYNNEGRRPFLSTTEASHFDLHYSPFSLESLDREEKLMKL 618
           V V+MSPESTV DLIAA +RQY  E RRP L+   A  FDLHYS FSLESLDR E LM L
Sbjct: 88  VQVLMSPESTVSDLIAATIRQYTKECRRPILAVDPAK-FDLHYSQFSLESLDRGENLMAL 146

Query: 619 GSRNFFMC-RTKAADAAPITSAKCS--STCSIQVDKASKT 729
           GSRNFF+C +T A D A  ++   S  S+CS +V+KA K+
Sbjct: 147 GSRNFFLCAKTAAVDGASCSTGTTSSQSSCSNEVEKAVKS 186


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