BLASTX nr result

ID: Coptis23_contig00005302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005302
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278736.1| PREDICTED: germin-like protein 2 [Vitis vini...   293   4e-77
ref|XP_004171130.1| PREDICTED: germin-like protein 5-1-like [Cuc...   286   8e-75
ref|XP_004144736.1| PREDICTED: germin-like protein 5-1-like [Cuc...   286   8e-75
ref|XP_002302696.1| predicted protein [Populus trichocarpa] gi|1...   281   2e-73
gb|ABK93974.1| unknown [Populus trichocarpa]                          281   2e-73

>ref|XP_002278736.1| PREDICTED: germin-like protein 2 [Vitis vinifera]
           gi|111379986|gb|ABH09468.1| germin-like protein 2 [Vitis
           vinifera] gi|147838426|emb|CAN76588.1| hypothetical
           protein VITISV_020289 [Vitis vinifera]
           gi|296089868|emb|CBI39687.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  293 bits (751), Expect = 4e-77
 Identities = 145/205 (70%), Positives = 172/205 (83%), Gaps = 1/205 (0%)
 Frame = -3

Query: 889 SIVAPLLLFFSVIYGTLA-DPDLLQDVCVADLSSGVKINGFACKPATKVTEADFFFAGLA 713
           ++VA  ++  +V  GT+A DPD+LQDVCVADL+SGVK+NGF+CK AT +T  DFFF GLA
Sbjct: 3   AVVALFVITLAVFSGTVAADPDMLQDVCVADLTSGVKVNGFSCKDATNITATDFFFDGLA 62

Query: 712 KPGATNNTLGSVVTAANVEKIPGLNTLGVSVSRIDYAPGGLNPPHTHPRATEVVFVLEGQ 533
           KPG TNN++GS+VT ANV+KIPGLNTLGVS+SRIDYAPGGLNPPHTHPRATE+VFVLEG+
Sbjct: 63  KPGLTNNSMGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLEGE 122

Query: 532 LTVGFXXXXXXXXXXXXKAGEVFVFPRGLVHFQINNENVPAAVIAAFNSQLPGTQAIAVA 353
           L VGF            K GE+FVFP+GLVHFQ NN  VPAAVI+AFNSQLPGTQ+IAV+
Sbjct: 123 LDVGFITTSNTLISKSIKKGEIFVFPKGLVHFQKNNGEVPAAVISAFNSQLPGTQSIAVS 182

Query: 352 LFASSPSVPDNVLAKAFQIGTKEVD 278
           LFA+SP VP+NVL KAFQ+GTKEV+
Sbjct: 183 LFAASPPVPNNVLTKAFQVGTKEVE 207


>ref|XP_004171130.1| PREDICTED: germin-like protein 5-1-like [Cucumis sativus]
          Length = 217

 Score =  286 bits (731), Expect = 8e-75
 Identities = 148/206 (71%), Positives = 163/206 (79%)
 Frame = -3

Query: 895 SMSIVAPLLLFFSVIYGTLADPDLLQDVCVADLSSGVKINGFACKPATKVTEADFFFAGL 716
           S    A L  FF VI  T ADPDLLQDVCVADL+SG+K+NGF CK  +  +  DFFF GL
Sbjct: 7   SALFTASLAFFFFVI--TAADPDLLQDVCVADLASGIKVNGFTCK--SNFSADDFFFNGL 62

Query: 715 AKPGATNNTLGSVVTAANVEKIPGLNTLGVSVSRIDYAPGGLNPPHTHPRATEVVFVLEG 536
           AKPGATNNTLGS VT ANV+ IPGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVLEG
Sbjct: 63  AKPGATNNTLGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEG 122

Query: 535 QLTVGFXXXXXXXXXXXXKAGEVFVFPRGLVHFQINNENVPAAVIAAFNSQLPGTQAIAV 356
           QL VGF            K GE+FVFP+GLVHFQ NN  VPAAVIAAFNSQ PGTQ+IA 
Sbjct: 123 QLDVGFITTGNVLVSKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAA 182

Query: 355 ALFASSPSVPDNVLAKAFQIGTKEVD 278
           ALFA+SP VPDNVL KAFQ+GTKEV+
Sbjct: 183 ALFAASPPVPDNVLTKAFQVGTKEVE 208


>ref|XP_004144736.1| PREDICTED: germin-like protein 5-1-like [Cucumis sativus]
          Length = 217

 Score =  286 bits (731), Expect = 8e-75
 Identities = 148/206 (71%), Positives = 163/206 (79%)
 Frame = -3

Query: 895 SMSIVAPLLLFFSVIYGTLADPDLLQDVCVADLSSGVKINGFACKPATKVTEADFFFAGL 716
           S    A L  FF VI  T ADPDLLQDVCVADL+SG+K+NGF CK  +  +  DFFF GL
Sbjct: 7   SALFTASLAFFFFVI--TAADPDLLQDVCVADLASGIKVNGFTCK--SNFSADDFFFNGL 62

Query: 715 AKPGATNNTLGSVVTAANVEKIPGLNTLGVSVSRIDYAPGGLNPPHTHPRATEVVFVLEG 536
           AKPGATNNTLGS VT ANV+ IPGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVLEG
Sbjct: 63  AKPGATNNTLGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEG 122

Query: 535 QLTVGFXXXXXXXXXXXXKAGEVFVFPRGLVHFQINNENVPAAVIAAFNSQLPGTQAIAV 356
           QL VGF            K GE+FVFP+GLVHFQ NN  VPAAVIAAFNSQ PGTQ+IA 
Sbjct: 123 QLDVGFITTGNVLVSKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAA 182

Query: 355 ALFASSPSVPDNVLAKAFQIGTKEVD 278
           ALFA+SP VPDNVL KAFQ+GTKEV+
Sbjct: 183 ALFAASPPVPDNVLTKAFQVGTKEVE 208


>ref|XP_002302696.1| predicted protein [Populus trichocarpa] gi|118482567|gb|ABK93204.1|
           unknown [Populus trichocarpa]
           gi|222844422|gb|EEE81969.1| predicted protein [Populus
           trichocarpa]
          Length = 217

 Score =  281 bits (720), Expect = 2e-73
 Identities = 139/206 (67%), Positives = 165/206 (80%), Gaps = 1/206 (0%)
 Frame = -3

Query: 892 MSIVAPLLLFFSVIYGTLA-DPDLLQDVCVADLSSGVKINGFACKPATKVTEADFFFAGL 716
           M+ V   L+ F+VI   LA DPD+LQD+CVA+ S+G+K+NGF CK  T +TEADFFF GL
Sbjct: 1   MAAVVTYLVIFTVISSALAYDPDMLQDLCVANTSAGIKVNGFTCKAETNITEADFFFDGL 60

Query: 715 AKPGATNNTLGSVVTAANVEKIPGLNTLGVSVSRIDYAPGGLNPPHTHPRATEVVFVLEG 536
           AKPG  NN++GS+VT  NVEKIPGLNTLGVS+SRIDYAP GLNPPHTHPRATE++FVLEG
Sbjct: 61  AKPGKVNNSVGSLVTGGNVEKIPGLNTLGVSLSRIDYAPDGLNPPHTHPRATEMIFVLEG 120

Query: 535 QLTVGFXXXXXXXXXXXXKAGEVFVFPRGLVHFQINNENVPAAVIAAFNSQLPGTQAIAV 356
           +L VGF            K GEVFVFPRGLVHFQ NN +  A+VI+AFNSQLPGTQ+IA+
Sbjct: 121 ELDVGFITTANKLISKTVKKGEVFVFPRGLVHFQKNNGDKAASVISAFNSQLPGTQSIAM 180

Query: 355 ALFASSPSVPDNVLAKAFQIGTKEVD 278
            LF S+P+VPDNVL KAFQ+GTKE+D
Sbjct: 181 TLFTSTPAVPDNVLTKAFQVGTKEID 206


>gb|ABK93974.1| unknown [Populus trichocarpa]
          Length = 217

 Score =  281 bits (719), Expect = 2e-73
 Identities = 140/206 (67%), Positives = 165/206 (80%), Gaps = 1/206 (0%)
 Frame = -3

Query: 892 MSIVAPLLLFFSVIYGTLA-DPDLLQDVCVADLSSGVKINGFACKPATKVTEADFFFAGL 716
           M+ +   L+ F+VI   LA DPD+LQD+CVA+  +G+K+NGF CK    VTEADFFF GL
Sbjct: 1   MAAIVTYLVIFTVISSALAYDPDMLQDLCVANTHAGIKVNGFTCKAEGNVTEADFFFDGL 60

Query: 715 AKPGATNNTLGSVVTAANVEKIPGLNTLGVSVSRIDYAPGGLNPPHTHPRATEVVFVLEG 536
           AKPG  NN++GS+VT ANVEKIPGLNTLGVS+SRIDYAP GLNPPHTHPRATE++FVLEG
Sbjct: 61  AKPGKVNNSVGSLVTGANVEKIPGLNTLGVSLSRIDYAPDGLNPPHTHPRATEMIFVLEG 120

Query: 535 QLTVGFXXXXXXXXXXXXKAGEVFVFPRGLVHFQINNENVPAAVIAAFNSQLPGTQAIAV 356
           +L VGF            K GEVFVFPRGLVHFQ NN +  A+VIAAFNSQLPGTQ+IA+
Sbjct: 121 ELDVGFITTANKLISKTVKKGEVFVFPRGLVHFQKNNGDKEASVIAAFNSQLPGTQSIAM 180

Query: 355 ALFASSPSVPDNVLAKAFQIGTKEVD 278
            LFAS+P+VPDNVL KAFQ+GTKE+D
Sbjct: 181 TLFASTPAVPDNVLTKAFQVGTKEID 206


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