BLASTX nr result

ID: Coptis23_contig00005300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005300
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525341.1| acyl-CoA oxidase, putative [Ricinus communis...    87   1e-15
gb|ABF13309.1| acyl-CoA oxidase [Phaseolus vulgaris]                   87   1e-15
gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesman...    84   1e-14
ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lyc...    84   1e-14
pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-C...    84   1e-14

>ref|XP_002525341.1| acyl-CoA oxidase, putative [Ricinus communis]
           gi|223535400|gb|EEF37074.1| acyl-CoA oxidase, putative
           [Ricinus communis]
          Length = 664

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/58 (74%), Positives = 49/58 (84%)
 Frame = +2

Query: 20  FTELSSDLVEAVVAHCQLTVVSKFKEKLQKNTSGKGVKEQLQLLFEIYALSLLHKHQG 193
           F ELS+DLVEA VAHCQL VVSKF EKLQ+   GKGVK+QLQ+L  +YAL+LLHKHQG
Sbjct: 512 FAELSADLVEAAVAHCQLIVVSKFIEKLQQEIPGKGVKQQLQILCYMYALNLLHKHQG 569


>gb|ABF13309.1| acyl-CoA oxidase [Phaseolus vulgaris]
          Length = 172

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/58 (77%), Positives = 47/58 (81%)
 Frame = +2

Query: 20  FTELSSDLVEAVVAHCQLTVVSKFKEKLQKNTSGKGVKEQLQLLFEIYALSLLHKHQG 193
           F ELS DLVEA VAHCQL VVSKF EKLQK+  GKGVK QL+LL  IYALSLLHKH G
Sbjct: 59  FQELSVDLVEAAVAHCQLIVVSKFIEKLQKDIPGKGVKHQLELLCSIYALSLLHKHLG 116


>gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesmaniae]
          Length = 664

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/58 (68%), Positives = 49/58 (84%)
 Frame = +2

Query: 20  FTELSSDLVEAVVAHCQLTVVSKFKEKLQKNTSGKGVKEQLQLLFEIYALSLLHKHQG 193
           F EL++DLVEA VAHCQL VVSK+ EKLQ+N  GKGVK+QL++L  IY+L +LHKHQG
Sbjct: 512 FAELAADLVEAAVAHCQLIVVSKYIEKLQQNIPGKGVKQQLEVLCGIYSLFILHKHQG 569


>ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lycopersicum]
           gi|58531948|gb|AAW78689.1| peroxisomal acyl-CoA oxidase
           1A [Solanum lycopersicum]
          Length = 664

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/58 (68%), Positives = 49/58 (84%)
 Frame = +2

Query: 20  FTELSSDLVEAVVAHCQLTVVSKFKEKLQKNTSGKGVKEQLQLLFEIYALSLLHKHQG 193
           F EL++DLVEA VAHCQL VVSK+ EKLQ+N  GKGVK+QL++L  IY+L +LHKHQG
Sbjct: 512 FAELAADLVEAAVAHCQLIVVSKYIEKLQQNIPGKGVKQQLEVLCGIYSLFILHKHQG 569


>pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
           gi|109157677|pdb|2FON|B Chain B, X-Ray Crystal Structure
           Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon
           Esculentum (Tomato) gi|109157678|pdb|2FON|C Chain C,
           X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
          Length = 683

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/58 (68%), Positives = 49/58 (84%)
 Frame = +2

Query: 20  FTELSSDLVEAVVAHCQLTVVSKFKEKLQKNTSGKGVKEQLQLLFEIYALSLLHKHQG 193
           F EL++DLVEA VAHCQL VVSK+ EKLQ+N  GKGVK+QL++L  IY+L +LHKHQG
Sbjct: 531 FAELAADLVEAAVAHCQLIVVSKYIEKLQQNIPGKGVKQQLEVLCGIYSLFILHKHQG 588


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