BLASTX nr result
ID: Coptis23_contig00005299
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00005299 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165341.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-arab... 191 5e-47 ref|XP_004136621.1| PREDICTED: alpha-L-arabinofuranosidase 1-lik... 191 5e-47 gb|AAR27067.1| a-arabinofuranosidase 1, partial [Ficus carica] 191 7e-47 gb|ABV08816.1| alpha-L-arabinofuranosidase [Fragaria x ananassa] 190 1e-46 ref|XP_002307940.1| predicted protein [Populus trichocarpa] gi|2... 189 2e-46 >ref|XP_004165341.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-arabinofuranosidase 1-like [Cucumis sativus] Length = 676 Score = 191 bits (485), Expect = 5e-47 Identities = 82/100 (82%), Positives = 92/100 (92%) Frame = +3 Query: 6 LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185 LL A T+HNSRLQLT ++KGVIWFDQ+S MPVETYKGHGFR +LV+M+ADL+PRFIRFP Sbjct: 205 LLNATETNHNSRLQLTTLKKGVIWFDQVSAMPVETYKGHGFRNDLVQMMADLEPRFIRFP 264 Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305 GGC VEGEWLRNAFRWKET+G WE+RPGHFGDVWMYWTDD Sbjct: 265 GGCFVEGEWLRNAFRWKETIGPWEQRPGHFGDVWMYWTDD 304 >ref|XP_004136621.1| PREDICTED: alpha-L-arabinofuranosidase 1-like [Cucumis sativus] Length = 676 Score = 191 bits (485), Expect = 5e-47 Identities = 82/100 (82%), Positives = 92/100 (92%) Frame = +3 Query: 6 LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185 LL A T+HNSRLQLT ++KGVIWFDQ+S MPVETYKGHGFR +LV+M+ADL+PRFIRFP Sbjct: 205 LLNATETNHNSRLQLTTLKKGVIWFDQVSAMPVETYKGHGFRNDLVQMMADLEPRFIRFP 264 Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305 GGC VEGEWLRNAFRWKET+G WE+RPGHFGDVWMYWTDD Sbjct: 265 GGCFVEGEWLRNAFRWKETIGPWEQRPGHFGDVWMYWTDD 304 >gb|AAR27067.1| a-arabinofuranosidase 1, partial [Ficus carica] Length = 272 Score = 191 bits (484), Expect = 7e-47 Identities = 84/101 (83%), Positives = 91/101 (90%) Frame = +3 Query: 3 FLLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRF 182 FLL AK T+ NSRLQLT RKGVIWFDQ+SVMP++TYKGHGFR +LV+MLA+LKPRF RF Sbjct: 100 FLLEAKGTNSNSRLQLTTTRKGVIWFDQVSVMPLDTYKGHGFRTDLVQMLAELKPRFFRF 159 Query: 183 PGGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305 PGGC VEGEWLRNAFRWKETVG WEERPGHFGDVW YWTDD Sbjct: 160 PGGCFVEGEWLRNAFRWKETVGPWEERPGHFGDVWFYWTDD 200 >gb|ABV08816.1| alpha-L-arabinofuranosidase [Fragaria x ananassa] Length = 665 Score = 190 bits (482), Expect = 1e-46 Identities = 81/100 (81%), Positives = 93/100 (93%) Frame = +3 Query: 6 LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185 LLVAK T+ +SRLQLT RKG+IWFDQ+S MP++TYKGHGFRK+LV+MLAD+KP+F+RFP Sbjct: 195 LLVAKGTNPSSRLQLTTARKGLIWFDQVSAMPLDTYKGHGFRKDLVDMLADMKPQFLRFP 254 Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305 GGC VEGEWLRNAFRWKET+G WEERPGHFGDVWMYWTDD Sbjct: 255 GGCFVEGEWLRNAFRWKETIGQWEERPGHFGDVWMYWTDD 294 >ref|XP_002307940.1| predicted protein [Populus trichocarpa] gi|222853916|gb|EEE91463.1| predicted protein [Populus trichocarpa] Length = 670 Score = 189 bits (480), Expect = 2e-46 Identities = 82/100 (82%), Positives = 91/100 (91%) Frame = +3 Query: 6 LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185 LL AK T+ NSRLQLT RKGVIWFDQ+S MP+ETYKGHGF+KEL+EML D+KP+FIRFP Sbjct: 201 LLEAKGTNPNSRLQLTTSRKGVIWFDQVSAMPLETYKGHGFQKELIEMLEDIKPQFIRFP 260 Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305 GGC VEGEWLRNAFRWKE++G WEERPGHFGDVWMYWTDD Sbjct: 261 GGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDD 300