BLASTX nr result

ID: Coptis23_contig00005299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005299
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165341.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-arab...   191   5e-47
ref|XP_004136621.1| PREDICTED: alpha-L-arabinofuranosidase 1-lik...   191   5e-47
gb|AAR27067.1| a-arabinofuranosidase 1, partial [Ficus carica]        191   7e-47
gb|ABV08816.1| alpha-L-arabinofuranosidase [Fragaria x ananassa]      190   1e-46
ref|XP_002307940.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46

>ref|XP_004165341.1| PREDICTED: LOW QUALITY PROTEIN: alpha-L-arabinofuranosidase 1-like
           [Cucumis sativus]
          Length = 676

 Score =  191 bits (485), Expect = 5e-47
 Identities = 82/100 (82%), Positives = 92/100 (92%)
 Frame = +3

Query: 6   LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185
           LL A  T+HNSRLQLT ++KGVIWFDQ+S MPVETYKGHGFR +LV+M+ADL+PRFIRFP
Sbjct: 205 LLNATETNHNSRLQLTTLKKGVIWFDQVSAMPVETYKGHGFRNDLVQMMADLEPRFIRFP 264

Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305
           GGC VEGEWLRNAFRWKET+G WE+RPGHFGDVWMYWTDD
Sbjct: 265 GGCFVEGEWLRNAFRWKETIGPWEQRPGHFGDVWMYWTDD 304


>ref|XP_004136621.1| PREDICTED: alpha-L-arabinofuranosidase 1-like [Cucumis sativus]
          Length = 676

 Score =  191 bits (485), Expect = 5e-47
 Identities = 82/100 (82%), Positives = 92/100 (92%)
 Frame = +3

Query: 6   LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185
           LL A  T+HNSRLQLT ++KGVIWFDQ+S MPVETYKGHGFR +LV+M+ADL+PRFIRFP
Sbjct: 205 LLNATETNHNSRLQLTTLKKGVIWFDQVSAMPVETYKGHGFRNDLVQMMADLEPRFIRFP 264

Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305
           GGC VEGEWLRNAFRWKET+G WE+RPGHFGDVWMYWTDD
Sbjct: 265 GGCFVEGEWLRNAFRWKETIGPWEQRPGHFGDVWMYWTDD 304


>gb|AAR27067.1| a-arabinofuranosidase 1, partial [Ficus carica]
          Length = 272

 Score =  191 bits (484), Expect = 7e-47
 Identities = 84/101 (83%), Positives = 91/101 (90%)
 Frame = +3

Query: 3   FLLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRF 182
           FLL AK T+ NSRLQLT  RKGVIWFDQ+SVMP++TYKGHGFR +LV+MLA+LKPRF RF
Sbjct: 100 FLLEAKGTNSNSRLQLTTTRKGVIWFDQVSVMPLDTYKGHGFRTDLVQMLAELKPRFFRF 159

Query: 183 PGGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305
           PGGC VEGEWLRNAFRWKETVG WEERPGHFGDVW YWTDD
Sbjct: 160 PGGCFVEGEWLRNAFRWKETVGPWEERPGHFGDVWFYWTDD 200


>gb|ABV08816.1| alpha-L-arabinofuranosidase [Fragaria x ananassa]
          Length = 665

 Score =  190 bits (482), Expect = 1e-46
 Identities = 81/100 (81%), Positives = 93/100 (93%)
 Frame = +3

Query: 6   LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185
           LLVAK T+ +SRLQLT  RKG+IWFDQ+S MP++TYKGHGFRK+LV+MLAD+KP+F+RFP
Sbjct: 195 LLVAKGTNPSSRLQLTTARKGLIWFDQVSAMPLDTYKGHGFRKDLVDMLADMKPQFLRFP 254

Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305
           GGC VEGEWLRNAFRWKET+G WEERPGHFGDVWMYWTDD
Sbjct: 255 GGCFVEGEWLRNAFRWKETIGQWEERPGHFGDVWMYWTDD 294


>ref|XP_002307940.1| predicted protein [Populus trichocarpa] gi|222853916|gb|EEE91463.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  189 bits (480), Expect = 2e-46
 Identities = 82/100 (82%), Positives = 91/100 (91%)
 Frame = +3

Query: 6   LLVAKATDHNSRLQLTMMRKGVIWFDQISVMPVETYKGHGFRKELVEMLADLKPRFIRFP 185
           LL AK T+ NSRLQLT  RKGVIWFDQ+S MP+ETYKGHGF+KEL+EML D+KP+FIRFP
Sbjct: 201 LLEAKGTNPNSRLQLTTSRKGVIWFDQVSAMPLETYKGHGFQKELIEMLEDIKPQFIRFP 260

Query: 186 GGCCVEGEWLRNAFRWKETVGSWEERPGHFGDVWMYWTDD 305
           GGC VEGEWLRNAFRWKE++G WEERPGHFGDVWMYWTDD
Sbjct: 261 GGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDD 300


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