BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005290
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19162.3| unnamed protein product [Vitis vinifera]               99   5e-19
gb|ABX80391.1| cryptochrome 1 [Vitis riparia]                          99   5e-19
gb|ABX79355.1| cryptochrome 1 [Vitis vinifera]                         99   5e-19
ref|XP_002285792.1| PREDICTED: cryptochrome-1 [Vitis vinifera]         99   5e-19
ref|XP_002513922.1| DNA photolyase, putative [Ricinus communis] ...    94   1e-17

>emb|CBI19162.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/83 (57%), Positives = 56/83 (67%)
 Frame = +3

Query: 15  NNNTPQFNFNIGVQNVNXXXXXXXXXXXXXXDGGVVPVWSPSTSSYSEQFVSEENGLGSS 194
           N+N PQFN  IG                   DGGVVPVWSPSTSSY+EQFVSEENG+G+S
Sbjct: 599 NHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGTS 658

Query: 195 STYLQTHPQSHQLFSRRWLSQAG 263
           S+YLQ HP+SHQL + + LSQ G
Sbjct: 659 SSYLQRHPRSHQLMNWKQLSQTG 681


>gb|ABX80391.1| cryptochrome 1 [Vitis riparia]
          Length = 681

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/83 (57%), Positives = 56/83 (67%)
 Frame = +3

Query: 15  NNNTPQFNFNIGVQNVNXXXXXXXXXXXXXXDGGVVPVWSPSTSSYSEQFVSEENGLGSS 194
           N+N PQFN  IG                   DGGVVPVWSPSTSSY+EQFVSEENG+G+S
Sbjct: 599 NHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGTS 658

Query: 195 STYLQTHPQSHQLFSRRWLSQAG 263
           S+YLQ HP+SHQL + + LSQ G
Sbjct: 659 SSYLQRHPRSHQLMNWKQLSQTG 681


>gb|ABX79355.1| cryptochrome 1 [Vitis vinifera]
          Length = 681

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/83 (57%), Positives = 56/83 (67%)
 Frame = +3

Query: 15  NNNTPQFNFNIGVQNVNXXXXXXXXXXXXXXDGGVVPVWSPSTSSYSEQFVSEENGLGSS 194
           N+N PQFN  IG                   DGGVVPVWSPSTSSY+EQFVSEENG+G+S
Sbjct: 599 NHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGTS 658

Query: 195 STYLQTHPQSHQLFSRRWLSQAG 263
           S+YLQ HP+SHQL + + LSQ G
Sbjct: 659 SSYLQRHPRSHQLMNWKQLSQTG 681


>ref|XP_002285792.1| PREDICTED: cryptochrome-1 [Vitis vinifera]
          Length = 681

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/83 (57%), Positives = 56/83 (67%)
 Frame = +3

Query: 15  NNNTPQFNFNIGVQNVNXXXXXXXXXXXXXXDGGVVPVWSPSTSSYSEQFVSEENGLGSS 194
           N+N PQFN  IG                   DGGVVPVWSPSTSSY+EQFVSEENG+G+S
Sbjct: 599 NHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGTS 658

Query: 195 STYLQTHPQSHQLFSRRWLSQAG 263
           S+YLQ HP+SHQL + + LSQ G
Sbjct: 659 SSYLQRHPRSHQLMNWKQLSQTG 681


>ref|XP_002513922.1| DNA photolyase, putative [Ricinus communis]
           gi|223547008|gb|EEF48505.1| DNA photolyase, putative
           [Ricinus communis]
          Length = 660

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/87 (50%), Positives = 55/87 (63%)
 Frame = +3

Query: 3   QTFRNNNTPQFNFNIGVQNVNXXXXXXXXXXXXXXDGGVVPVWSPSTSSYSEQFVSEENG 182
           Q FR+NN P  N   G+ N                DGG+VPVWSP ++SYSEQF  +ENG
Sbjct: 574 QAFRSNNLPNVNILRGLPNTEDSTAESSSSTRRERDGGIVPVWSPPSTSYSEQFAGDENG 633

Query: 183 LGSSSTYLQTHPQSHQLFSRRWLSQAG 263
           +G+SS+YLQ HPQSHQ+ + R LSQ G
Sbjct: 634 IGTSSSYLQRHPQSHQIINWRRLSQTG 660