BLASTX nr result

ID: Coptis23_contig00005262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005262
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266781.1| PREDICTED: uncharacterized protein LOC100246...   201   5e-50
ref|XP_004139914.1| PREDICTED: uncharacterized protein LOC101217...   199   2e-49
ref|XP_004172544.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   198   3e-49
ref|XP_002312225.1| predicted protein [Populus trichocarpa] gi|1...   197   7e-49
dbj|BAJ90248.1| predicted protein [Hordeum vulgare subsp. vulgar...   196   2e-48

>ref|XP_002266781.1| PREDICTED: uncharacterized protein LOC100246650 [Vitis vinifera]
           gi|297736099|emb|CBI24137.3| unnamed protein product
           [Vitis vinifera]
          Length = 127

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/125 (76%), Positives = 111/125 (88%)
 Frame = -2

Query: 377 LLWEKSGTWRWLVTKTRDSKPFFIGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 198
           +LWEKS TWRW+V K+RDSKPFF+ FATICG+VPGVIGY VM +TN+ N +LEAQLR  A
Sbjct: 3   VLWEKSETWRWIVRKSRDSKPFFLAFATICGVVPGVIGYCVMQFTNSRNPELEAQLRSNA 62

Query: 197 RPETLMMGQVNRERLAEYLGELQRKEDTNDRYVAALKGETLTRKPYVRIQPIPKEDVKEA 18
           RP++LMMG+VN+ERLAE+LGELQRKEDTNDRYVAAL+GETLTRKPY RIQPIPK+   E 
Sbjct: 63  RPDSLMMGKVNQERLAEFLGELQRKEDTNDRYVAALRGETLTRKPYERIQPIPKQSNME- 121

Query: 17  AKEQK 3
           AKEQK
Sbjct: 122 AKEQK 126


>ref|XP_004139914.1| PREDICTED: uncharacterized protein LOC101217822 [Cucumis sativus]
          Length = 133

 Score =  199 bits (506), Expect = 2e-49
 Identities = 95/125 (76%), Positives = 108/125 (86%)
 Frame = -2

Query: 377 LLWEKSGTWRWLVTKTRDSKPFFIGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 198
           +LWEKS TWRW+V KTRDSK FF  FAT+CG+VPG+IGY VM  TN+ NEQLEA+LR+ A
Sbjct: 3   ILWEKSETWRWVVRKTRDSKSFFFTFATVCGLVPGLIGYCVMQATNSTNEQLEARLRQNA 62

Query: 197 RPETLMMGQVNRERLAEYLGELQRKEDTNDRYVAALKGETLTRKPYVRIQPIPKEDVKEA 18
           RPE+LMMGQVNRERLAEYLGELQRKEDTNDRYVAAL+G+TLTRKPYVRIQPIP +     
Sbjct: 63  RPESLMMGQVNRERLAEYLGELQRKEDTNDRYVAALEGKTLTRKPYVRIQPIPNQSNDAT 122

Query: 17  AKEQK 3
            KEQ+
Sbjct: 123 VKEQQ 127


>ref|XP_004172544.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228668 [Cucumis sativus]
          Length = 133

 Score =  198 bits (504), Expect = 3e-49
 Identities = 95/125 (76%), Positives = 107/125 (85%)
 Frame = -2

Query: 377 LLWEKSGTWRWLVTKTRDSKPFFIGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 198
           +LWEKS TWRW+V KTRDSK FF  FAT+CG+VPG+IGY VM  TN+ NEQLEA+LR  A
Sbjct: 3   ILWEKSETWRWVVRKTRDSKSFFFTFATVCGLVPGLIGYCVMQATNSTNEQLEARLRXNA 62

Query: 197 RPETLMMGQVNRERLAEYLGELQRKEDTNDRYVAALKGETLTRKPYVRIQPIPKEDVKEA 18
           RPE+LMMGQVNRERLAEYLGELQRKEDTNDRYVAAL+G+TLTRKPYVRIQPIP +     
Sbjct: 63  RPESLMMGQVNRERLAEYLGELQRKEDTNDRYVAALEGKTLTRKPYVRIQPIPNQSNDAT 122

Query: 17  AKEQK 3
            KEQ+
Sbjct: 123 VKEQQ 127


>ref|XP_002312225.1| predicted protein [Populus trichocarpa] gi|118487120|gb|ABK95389.1|
           unknown [Populus trichocarpa]
           gi|222852045|gb|EEE89592.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  197 bits (501), Expect = 7e-49
 Identities = 91/124 (73%), Positives = 109/124 (87%)
 Frame = -2

Query: 377 LLWEKSGTWRWLVTKTRDSKPFFIGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 198
           +LWEKS  WRW+V KTRDSKPFF  FAT+CG+VPGVIGYFVM  TN+ N +LEA+LR+ A
Sbjct: 3   ILWEKSEAWRWIVRKTRDSKPFFFAFATVCGVVPGVIGYFVMQTTNSRNPELEARLRQNA 62

Query: 197 RPETLMMGQVNRERLAEYLGELQRKEDTNDRYVAALKGETLTRKPYVRIQPIPKEDVKEA 18
           RP++LMMG+VNRERLAEYLGELQRKEDTNDRYVAAL+GETLTR P++RIQPIPK D  +A
Sbjct: 63  RPDSLMMGKVNRERLAEYLGELQRKEDTNDRYVAALRGETLTRNPHLRIQPIPKLDNTQA 122

Query: 17  AKEQ 6
            +++
Sbjct: 123 DEQK 126


>dbj|BAJ90248.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326507724|dbj|BAJ86605.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326507926|dbj|BAJ86706.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 136

 Score =  196 bits (498), Expect = 2e-48
 Identities = 89/125 (71%), Positives = 107/125 (85%)
 Frame = -2

Query: 377 LLWEKSGTWRWLVTKTRDSKPFFIGFATICGIVPGVIGYFVMNYTNAHNEQLEAQLRKTA 198
           +LWEKS  WRWLV +TRDSKPFF  FA +CG++PGV+GY VM  T++ N++LEA LR  A
Sbjct: 3   ILWEKSRAWRWLVGRTRDSKPFFFTFAALCGVIPGVVGYGVMQLTSSRNDKLEAHLRSNA 62

Query: 197 RPETLMMGQVNRERLAEYLGELQRKEDTNDRYVAALKGETLTRKPYVRIQPIPKEDVKEA 18
           RPET MMGQ+NRERLAE+LGE+QRKEDTNDRYVAALKGETLTRKPY RIQP+P++  +E 
Sbjct: 63  RPETTMMGQINRERLAEFLGEIQRKEDTNDRYVAALKGETLTRKPYERIQPVPQQAAQEN 122

Query: 17  AKEQK 3
           AK+QK
Sbjct: 123 AKDQK 127


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