BLASTX nr result

ID: Coptis23_contig00005260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005260
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873566.1| hypothetical protein ARALYDRAFT_488082 [Arab...    61   5e-07
gb|AFK34149.1| unknown [Lotus japonicus]                               60   2e-06
gb|ACU24197.1| unknown [Glycine max]                                   59   2e-06
ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258...    59   2e-06
ref|XP_003545396.1| PREDICTED: uncharacterized protein LOC100798...    58   4e-06

>ref|XP_002873566.1| hypothetical protein ARALYDRAFT_488082 [Arabidopsis lyrata subsp.
           lyrata] gi|297319403|gb|EFH49825.1| hypothetical protein
           ARALYDRAFT_488082 [Arabidopsis lyrata subsp. lyrata]
          Length = 196

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
 Frame = -3

Query: 787 FQNQNLDFHH--EGPASNKMTSSMFKDSQKKVSSG---RKQLQDFSNCSSIHQEASTRMS 623
           FQ++N    H  +  A+ K  SS+   + KK  +G   RK L D +N S +  +AS++  
Sbjct: 12  FQDENALAAHGKKAVAAGKGKSSL--PAPKKNGTGFGNRKALHDITNKSKLQPQASSKTK 69

Query: 622 NFSE--DFNVAEEGFLHDHSMCIAAQKAQMEQDHYSAFLFDHGLLDSDISESSSNAKEAV 449
              E  DF++A+EGFLHDHS CI  Q+      ++S  +  HG  D++I+E       + 
Sbjct: 70  KNVEGVDFDIAKEGFLHDHSKCIEEQQQNQWDSYFSEHIILHG-HDTNINEGVPEYNNSK 128

Query: 448 EAALGSSRRFLELEPIP 398
           E    +S  + EL+ IP
Sbjct: 129 EIDDENSHSWDELKEIP 145


>gb|AFK34149.1| unknown [Lotus japonicus]
          Length = 184

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -3

Query: 784 QNQNLDFHHEGPASNKMTSSMFKDSQKKV--SSGRKQLQDFSNCSSIHQEASTRMSNF-S 614
           ++ NLD H +    N  + +   D +K     SGRK L D SN +S   E S +  N   
Sbjct: 13  KDDNLDIHPKKAGFNVKSKNSKLDGKKGGLGKSGRKALNDISNKTSRQTETSVQKKNLPK 72

Query: 613 EDFNVAEEGFLHDHSMCIAAQKAQM 539
           ED N+ EE FLHDH  CI AQKA M
Sbjct: 73  EDVNIKEEMFLHDHKKCIEAQKAAM 97


>gb|ACU24197.1| unknown [Glycine max]
          Length = 181

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -3

Query: 784 QNQNLDFHHEGPASNKMTSSMFKDSQKKVSSGRKQLQDFSNCSSIHQ-EASTRMSNF-SE 611
           +++NL+ H +    +K + +  K     ++ GRK L D +N SS+H  EAS R  N   +
Sbjct: 13  KDENLNLHSKKTTKSKNSKTNGKKDGSGIA-GRKALNDITNKSSLHHPEASVRKRNLPKQ 71

Query: 610 DFNVAEEGFLHDHSMCIAAQKAQM 539
           D NV EE FLHDH  CI AQ A M
Sbjct: 72  DINVKEEMFLHDHKKCIEAQNATM 95


>ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258543 [Vitis vinifera]
           gi|296083837|emb|CBI24225.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
 Frame = -3

Query: 718 KDSQKKVSS--GRKQLQDFSNCSSIHQEASTRMSNF-SEDFNVAEEGFLHDHSMCIAAQK 548
           K + KK      RK L + +N S++H E S +  +   E+FN+AEE FLHDH  CI AQK
Sbjct: 34  KTTAKKAGGLGNRKALDNITNKSTLHHETSLKKKHLPKEEFNIAEERFLHDHKKCIEAQK 93

Query: 547 AQMEQDHYSAFLFDHGLLDSDISESSSNAK--EAVEAALGSSRRFLELEPI 401
           A  E       L  HG    ++S+S S+A+  +A +A +        LEP+
Sbjct: 94  AATEPCFLDIVLPGHG-NHINLSDSISHAEYPQAKQAKIYLDSTCDSLEPV 143


>ref|XP_003545396.1| PREDICTED: uncharacterized protein LOC100798738 [Glycine max]
          Length = 181

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -3

Query: 784 QNQNLDFHHEGPASNKMTSSMFKDSQKKVSSGRKQLQDFSNCSSIHQ-EASTRMSNF-SE 611
           +++NL+ H +    +K + +  K     ++ GRK L D +N SS+H  EAS +  N   +
Sbjct: 13  KDENLNLHSKKTTKSKNSKTNGKKDGSGIA-GRKALNDITNKSSLHHPEASVKKRNLPKQ 71

Query: 610 DFNVAEEGFLHDHSMCIAAQKAQM 539
           D NV EE FLHDH  CI AQ A M
Sbjct: 72  DINVKEEMFLHDHKKCIEAQNATM 95


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