BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005256
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   209   4e-52
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   209   8e-52
ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|2...   206   6e-51
ref|XP_002515305.1| Transcription initiation factor TFIID subuni...   204   2e-50
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     204   2e-50

>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  209 bits (533), Expect = 4e-52
 Identities = 108/129 (83%), Positives = 114/129 (88%)
 Frame = -2

Query: 742 MQNSSTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 563
           M N S G   +SKSK GTSQPS+T SFKRKRGVFQKDLQHMMYGFGDDPNPLPETVAL+E
Sbjct: 1   MNNLSAG--PSSKSKVGTSQPSET-SFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVE 57

Query: 562 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAF 383
           DI VEYVTDL +KAQD+ SKRGKLL EDFLYLIRKD PK NRCTELLSM EELKQARKAF
Sbjct: 58  DIVVEYVTDLAHKAQDIGSKRGKLLVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAF 117

Query: 382 EVDEEKLAT 356
           EVDEEKLA+
Sbjct: 118 EVDEEKLAS 126


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  209 bits (531), Expect = 8e-52
 Identities = 108/127 (85%), Positives = 117/127 (92%)
 Frame = -2

Query: 736 NSSTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLEDI 557
           NSS+ G S SK +AG+SQPSD+ SFKRKRGVFQKDLQHMMYGFGDD NPLPETVALLEDI
Sbjct: 2   NSSSAGPS-SKPRAGSSQPSDS-SFKRKRGVFQKDLQHMMYGFGDDANPLPETVALLEDI 59

Query: 556 AVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAFEV 377
            VEYVTDLV+KAQ+ ASKRGKLLTEDFL+L+RKD PK NRCTELLSMNEELKQARKAF+V
Sbjct: 60  VVEYVTDLVHKAQETASKRGKLLTEDFLFLMRKDLPKLNRCTELLSMNEELKQARKAFDV 119

Query: 376 DEEKLAT 356
           DEEKLAT
Sbjct: 120 DEEKLAT 126


>ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|222861085|gb|EEE98627.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  206 bits (523), Expect = 6e-51
 Identities = 103/131 (78%), Positives = 114/131 (87%)
 Frame = -2

Query: 742 MQNSSTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 563
           M NSSTG  S+SKSKAG+S     TSFKRKRG+FQKDLQHMMYGFGDDPNPLPETVAL+E
Sbjct: 1   MNNSSTG--SSSKSKAGSSSQPSETSFKRKRGMFQKDLQHMMYGFGDDPNPLPETVALVE 58

Query: 562 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAF 383
           DI VEYVTD+ +KAQ++ SKRGKL  EDFL+LIRKD PK NRCTELLSM EELKQARKAF
Sbjct: 59  DIVVEYVTDMAHKAQEIGSKRGKLSVEDFLFLIRKDPPKLNRCTELLSMQEELKQARKAF 118

Query: 382 EVDEEKLATND 350
           EVDEEKLA+ +
Sbjct: 119 EVDEEKLASTE 129


>ref|XP_002515305.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223545785|gb|EEF47289.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 128

 Score =  204 bits (519), Expect = 2e-50
 Identities = 105/129 (81%), Positives = 114/129 (88%)
 Frame = -2

Query: 742 MQNSSTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 563
           M +S TG   +SKSK G+SQPS+T SFKRKRGVFQKDLQHMMYGFGDDPNPLPE+VAL+E
Sbjct: 1   MSSSFTG--PSSKSKVGSSQPSET-SFKRKRGVFQKDLQHMMYGFGDDPNPLPESVALVE 57

Query: 562 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAF 383
           DI VEYVTDL +KAQD+ SKRGKL  EDFLYLIRKD PK NRCTELLSM EELKQARKAF
Sbjct: 58  DIVVEYVTDLAHKAQDIGSKRGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAF 117

Query: 382 EVDEEKLAT 356
           EVDEEKLA+
Sbjct: 118 EVDEEKLAS 126


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  204 bits (518), Expect = 2e-50
 Identities = 104/128 (81%), Positives = 116/128 (90%)
 Frame = -2

Query: 742 MQNSSTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 563
           M NSS G   +SK++AG SQPS++ S KRKRG+FQKDLQHMMYGFGDD NPLPETVAL+E
Sbjct: 1   MNNSSAG--PSSKARAGASQPSES-SLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVE 57

Query: 562 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAF 383
           DI V+YVTD+V+KAQDVA+KRGKLLTEDFL+LIRKD PK NRCTELLSMNEELKQARKAF
Sbjct: 58  DIVVDYVTDMVHKAQDVATKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAF 117

Query: 382 EVDEEKLA 359
           EVDEEKLA
Sbjct: 118 EVDEEKLA 125