BLASTX nr result

ID: Coptis23_contig00005255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005255
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531297.1| dtdp-glucose 4-6-dehydratase, putative [Rici...   729   0.0  
ref|XP_002328342.1| predicted protein [Populus trichocarpa] gi|2...   723   0.0  
ref|XP_002319639.1| predicted protein [Populus trichocarpa] gi|2...   721   0.0  
gb|ADV59924.1| putative GDP-mannose-3,5-epimerase [Citrus unshiu]     719   0.0  
ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Viti...   719   0.0  

>ref|XP_002531297.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
            gi|223529130|gb|EEF31110.1| dtdp-glucose 4-6-dehydratase,
            putative [Ricinus communis]
          Length = 376

 Score =  729 bits (1881), Expect = 0.0
 Identities = 349/360 (96%), Positives = 358/360 (99%)
 Frame = +1

Query: 181  LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 360
            LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL
Sbjct: 17   LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 76

Query: 361  VDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGVK 540
            VDLRVMDNC+KVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGVK
Sbjct: 77   VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGVK 136

Query: 541  RLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 720
            RLFYASSACIYPEFKQL+TNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR
Sbjct: 137  RLFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 196

Query: 721  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVLR 900
            IGRFHNIYGPFGTWKGGREKAPAAFCRKALT+TDKFEMWGDGLQTRSFTFIDECVEGVLR
Sbjct: 197  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 256

Query: 901  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 1080
            LTKSDFREPVNIGSDEMVSMNEMAEIVLSFED+KLPIHHIPGPEGVRGRNSDNTLIKEKL
Sbjct: 257  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDRKLPIHHIPGPEGVRGRNSDNTLIKEKL 316

Query: 1081 GWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 1260
            GWAPTMRLKDGLR TYFWIKEQIEKEKS+G+DLS+YGSSKVVGTQAPVQLGSLRAADGKE
Sbjct: 317  GWAPTMRLKDGLRITYFWIKEQIEKEKSQGVDLSIYGSSKVVGTQAPVQLGSLRAADGKE 376


>ref|XP_002328342.1| predicted protein [Populus trichocarpa] gi|222838057|gb|EEE76422.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  723 bits (1865), Expect = 0.0
 Identities = 347/361 (96%), Positives = 356/361 (98%)
 Frame = +1

Query: 178  ALEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH 357
            ALEREPYWPSEKLRISITGAGGFIASHIARRLK+EGHYIIASDWKKNEHMTEDMFCHEFH
Sbjct: 15   ALEREPYWPSEKLRISITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMTEDMFCHEFH 74

Query: 358  LVDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGV 537
            LVDLRVMDNC+KVT  VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGV
Sbjct: 75   LVDLRVMDNCLKVTKDVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGV 134

Query: 538  KRLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 717
            KRLFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC
Sbjct: 135  KRLFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 194

Query: 718  RIGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVL 897
            RIGRFHNIYGPFGTWKGGREKAPAAFCRKA+T+ DKFEMWGDGLQTRSFTFIDECVEGVL
Sbjct: 195  RIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSIDKFEMWGDGLQTRSFTFIDECVEGVL 254

Query: 898  RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEK 1077
            RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGRNSDNTLIKEK
Sbjct: 255  RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSDNTLIKEK 314

Query: 1078 LGWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGK 1257
            LGWAPTMRLKDGLR TYFWIKEQIEKEKS+GIDLS+YGSSKVVGTQAPVQLGSLRAADGK
Sbjct: 315  LGWAPTMRLKDGLRITYFWIKEQIEKEKSKGIDLSIYGSSKVVGTQAPVQLGSLRAADGK 374

Query: 1258 E 1260
            E
Sbjct: 375  E 375


>ref|XP_002319639.1| predicted protein [Populus trichocarpa] gi|222858015|gb|EEE95562.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  721 bits (1862), Expect = 0.0
 Identities = 345/361 (95%), Positives = 356/361 (98%)
 Frame = +1

Query: 178  ALEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH 357
            ALEREPYWPSE L+ISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH
Sbjct: 15   ALEREPYWPSENLKISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH 74

Query: 358  LVDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGV 537
            LVDLRVMDNC+KVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGV
Sbjct: 75   LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGV 134

Query: 538  KRLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 717
            KRLFYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC
Sbjct: 135  KRLFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 194

Query: 718  RIGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVL 897
            RIGRFHNIYGPFGTWKGGREKAPAAFCRK +T+ DKFEMWGDGLQTRSFTFIDECVEGVL
Sbjct: 195  RIGRFHNIYGPFGTWKGGREKAPAAFCRKTMTSIDKFEMWGDGLQTRSFTFIDECVEGVL 254

Query: 898  RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEK 1077
            RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGRNSDNTLIKEK
Sbjct: 255  RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSDNTLIKEK 314

Query: 1078 LGWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGK 1257
            LGWAPTM+LKDGLRFTYFWIKEQIEKEKS+G+DLS+YGSSKVVGTQAPVQLGSLRAADGK
Sbjct: 315  LGWAPTMKLKDGLRFTYFWIKEQIEKEKSQGMDLSIYGSSKVVGTQAPVQLGSLRAADGK 374

Query: 1258 E 1260
            E
Sbjct: 375  E 375


>gb|ADV59924.1| putative GDP-mannose-3,5-epimerase [Citrus unshiu]
          Length = 375

 Score =  719 bits (1857), Expect = 0.0
 Identities = 344/360 (95%), Positives = 356/360 (98%)
 Frame = +1

Query: 181  LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 360
            LEREPYWPSEKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL
Sbjct: 16   LEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 75

Query: 361  VDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGVK 540
            VDLRVMDNC+KVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRI+GVK
Sbjct: 76   VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135

Query: 541  RLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 720
            R FYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLA+EELCKHYTKDFGIECR
Sbjct: 136  RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195

Query: 721  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVLR 900
            +GRFHNIYGPFGTWKGGREKAPAAFCRKALT+TDKFEMWGDGLQTRSFTFIDECVEGVLR
Sbjct: 196  VGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 255

Query: 901  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 1080
            LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL
Sbjct: 256  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 315

Query: 1081 GWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 1260
            GWAP+M+LKDGLR TYFWIKEQIEKEK+ GIDLSVYGSSKVVGTQAPVQLGSLRAADG+E
Sbjct: 316  GWAPSMKLKDGLRITYFWIKEQIEKEKTPGIDLSVYGSSKVVGTQAPVQLGSLRAADGQE 375


>ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Vitis vinifera]
          Length = 376

 Score =  719 bits (1856), Expect = 0.0
 Identities = 345/360 (95%), Positives = 355/360 (98%)
 Frame = +1

Query: 181  LEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL 360
            LEREPYW SEKLRISITGAGGFIASHIARRLK+EGHYIIASDWKKNEHMTEDMFCHEFHL
Sbjct: 17   LEREPYWQSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWKKNEHMTEDMFCHEFHL 76

Query: 361  VDLRVMDNCMKVTSGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNILEASRINGVK 540
            VDLRVMDNC+KVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN+LEASRINGVK
Sbjct: 77   VDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRINGVK 136

Query: 541  RLFYASSACIYPEFKQLETNVSLKEADAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 720
            R FYASSACIYPEFKQLETNVSLKE+DAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR
Sbjct: 137  RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 196

Query: 721  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTATDKFEMWGDGLQTRSFTFIDECVEGVLR 900
            IGRFHNIYGPFGTWKGGREKAPAAFCRKALT+TDKFEMWGDGLQTRSFTFIDECVEGVLR
Sbjct: 197  IGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 256

Query: 901  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 1080
            LTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGRNSDNTLIKEKL
Sbjct: 257  LTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSDNTLIKEKL 316

Query: 1081 GWAPTMRLKDGLRFTYFWIKEQIEKEKSRGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 1260
            GWAPTM+LKDGLR TYFWIKEQIEKEK +GIDLS+YGSSKVVGTQAPVQLGSLRAADGKE
Sbjct: 317  GWAPTMKLKDGLRITYFWIKEQIEKEKVKGIDLSIYGSSKVVGTQAPVQLGSLRAADGKE 376


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