BLASTX nr result
ID: Coptis23_contig00005245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005245
(1340 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus comm... 679 0.0
ref|XP_002283011.1| PREDICTED: COP9 signalosome complex subunit ... 672 0.0
emb|CAN77214.1| hypothetical protein VITISV_036371 [Vitis vinifera] 672 0.0
ref|XP_002320585.1| predicted protein [Populus trichocarpa] gi|2... 667 0.0
ref|XP_003539372.1| PREDICTED: COP9 signalosome complex subunit ... 664 0.0
>ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus communis]
gi|223551060|gb|EEF52546.1| cop9 complex subunit,
putative [Ricinus communis]
Length = 397
Score = 679 bits (1751), Expect = 0.0
Identities = 353/425 (83%), Positives = 379/425 (89%)
Frame = +2
Query: 11 MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHMVSDDVPLVVSRQLLQS 190
MESA ASASAITDQRQKIEQYK IL +V++SND+ QAKKFIDHM+SDDVPLVVSRQLLQS
Sbjct: 1 MESAFASASAITDQRQKIEQYKHILASVISSNDIDQAKKFIDHMLSDDVPLVVSRQLLQS 60
Query: 191 FSQDLGTLEPEAQKEIAHYALVQIQPRVVSXXXXXXXXXXXXXXXXXXXXXQIPCLDSYW 370
F+Q+LG LEP+ QKEIAHY L QIQPRVVS +
Sbjct: 61 FAQELGRLEPDTQKEIAHYTLAQIQPRVVS----------------------------FE 92
Query: 371 KMVLIIREKLAELYESEEQWSRAAQMLSGIDLDSGIRMMDEAYKLSKCVQIARLYLEDDD 550
+ VLIIREKLAELYESE+QWS+AAQMLSGIDLDSG+R++D+ ++LSKCVQIARLYLEDDD
Sbjct: 93 EQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDD 152
Query: 551 AVNAEAFINKASFLVSGSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQRQIG 730
AVNAEAFINKASFLVS SQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIE+RQIG
Sbjct: 153 AVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIG 212
Query: 731 EELIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 910
+E IDE+ALEQAL+AAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL
Sbjct: 213 DETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 272
Query: 911 RKPEIDAFAEELKAHQKALLPDKFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPE 1090
RKPEIDAFAEELKAHQKALLPD FTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGI P
Sbjct: 273 RKPEIDAFAEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPH 332
Query: 1091 KAEKIASRMIYEDRMRGSIDQVEAFIHFEDDTEELQQWDEQIVGLCQALNDVLDGMAKRG 1270
KAEKIASRMIYEDRMRGSIDQVEA IHFEDDTEELQQWD+QIVGLCQALNDVLD MAK+G
Sbjct: 333 KAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDVLDSMAKKG 392
Query: 1271 LTIPV 1285
L+IPV
Sbjct: 393 LSIPV 397
>ref|XP_002283011.1| PREDICTED: COP9 signalosome complex subunit 4 [Vitis vinifera]
gi|302142470|emb|CBI19673.3| unnamed protein product
[Vitis vinifera]
Length = 397
Score = 672 bits (1735), Expect = 0.0
Identities = 349/425 (82%), Positives = 380/425 (89%)
Frame = +2
Query: 11 MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHMVSDDVPLVVSRQLLQS 190
M+SA ASASAI+DQRQKIEQYK IL++V+ SND+ QA+KFIDHM+SDDVPLVVSRQLLQ
Sbjct: 1 MDSAFASASAISDQRQKIEQYKLILSSVITSNDIAQARKFIDHMLSDDVPLVVSRQLLQI 60
Query: 191 FSQDLGTLEPEAQKEIAHYALVQIQPRVVSXXXXXXXXXXXXXXXXXXXXXQIPCLDSYW 370
F+Q+LG L+PEAQKEIAHY L QIQPR VS +
Sbjct: 61 FAQELGRLKPEAQKEIAHYTLTQIQPRCVS----------------------------FE 92
Query: 371 KMVLIIREKLAELYESEEQWSRAAQMLSGIDLDSGIRMMDEAYKLSKCVQIARLYLEDDD 550
+ VL+IREKLAELYESE+QWS+AAQMLSGIDLDS +R++D+ ++LSKCVQIARLYLEDDD
Sbjct: 93 EQVLVIREKLAELYESEQQWSKAAQMLSGIDLDSTMRVIDDTFRLSKCVQIARLYLEDDD 152
Query: 551 AVNAEAFINKASFLVSGSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQRQIG 730
AVNAEAFINKASFLVS SQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIE+RQIG
Sbjct: 153 AVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIG 212
Query: 731 EELIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 910
+ELIDE+ALEQAL+AAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL
Sbjct: 213 DELIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 272
Query: 911 RKPEIDAFAEELKAHQKALLPDKFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPE 1090
RKPEIDAFAEELKAHQKALLPD FTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGIAP+
Sbjct: 273 RKPEIDAFAEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIAPQ 332
Query: 1091 KAEKIASRMIYEDRMRGSIDQVEAFIHFEDDTEELQQWDEQIVGLCQALNDVLDGMAKRG 1270
KAEKIASRMIYEDRMRGSIDQVEA IHFEDDTEELQQWD+QIVGLCQALNDVLD MAK+G
Sbjct: 333 KAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDVLDSMAKKG 392
Query: 1271 LTIPV 1285
L+IPV
Sbjct: 393 LSIPV 397
>emb|CAN77214.1| hypothetical protein VITISV_036371 [Vitis vinifera]
Length = 397
Score = 672 bits (1733), Expect = 0.0
Identities = 349/425 (82%), Positives = 379/425 (89%)
Frame = +2
Query: 11 MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHMVSDDVPLVVSRQLLQS 190
M+SA ASASAI+DQRQKIEQYK IL++V+ SND+ QA+KFIDHM+SDDVPLVVSRQLLQ
Sbjct: 1 MDSAFASASAISDQRQKIEQYKLILSSVITSNDIAQARKFIDHMLSDDVPLVVSRQLLQI 60
Query: 191 FSQDLGTLEPEAQKEIAHYALVQIQPRVVSXXXXXXXXXXXXXXXXXXXXXQIPCLDSYW 370
F+Q+LG L PEAQKEIAHY L QIQPR VS +
Sbjct: 61 FAQELGRLXPEAQKEIAHYTLTQIQPRCVS----------------------------FE 92
Query: 371 KMVLIIREKLAELYESEEQWSRAAQMLSGIDLDSGIRMMDEAYKLSKCVQIARLYLEDDD 550
+ VL+IREKLAELYESE+QWS+AAQMLSGIDLDS +R++D+ ++LSKCVQIARLYLEDDD
Sbjct: 93 EQVLVIREKLAELYESEQQWSKAAQMLSGIDLDSTMRVIDDTFRLSKCVQIARLYLEDDD 152
Query: 551 AVNAEAFINKASFLVSGSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQRQIG 730
AVNAEAFINKASFLVS SQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIE+RQIG
Sbjct: 153 AVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIG 212
Query: 731 EELIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 910
+ELIDE+ALEQAL+AAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL
Sbjct: 213 DELIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 272
Query: 911 RKPEIDAFAEELKAHQKALLPDKFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPE 1090
RKPEIDAFAEELKAHQKALLPD FTVLDRAMIEHNLLSASKLYTNISF+ELGTLLGIAP+
Sbjct: 273 RKPEIDAFAEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIAPQ 332
Query: 1091 KAEKIASRMIYEDRMRGSIDQVEAFIHFEDDTEELQQWDEQIVGLCQALNDVLDGMAKRG 1270
KAEKIASRMIYEDRMRGSIDQVEA IHFEDDTEELQQWD+QIVGLCQALNDVLD MAK+G
Sbjct: 333 KAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDVLDSMAKKG 392
Query: 1271 LTIPV 1285
L+IPV
Sbjct: 393 LSIPV 397
>ref|XP_002320585.1| predicted protein [Populus trichocarpa] gi|222861358|gb|EEE98900.1|
predicted protein [Populus trichocarpa]
Length = 397
Score = 667 bits (1720), Expect = 0.0
Identities = 347/425 (81%), Positives = 375/425 (88%)
Frame = +2
Query: 11 MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHMVSDDVPLVVSRQLLQS 190
ME ASAS ITDQRQKIEQYK IL++V++SND+ QAKKFIDHM+SDDVPLVVSRQLLQ+
Sbjct: 1 MEIVFASASTITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQT 60
Query: 191 FSQDLGTLEPEAQKEIAHYALVQIQPRVVSXXXXXXXXXXXXXXXXXXXXXQIPCLDSYW 370
F+ +LG LEPE QKEIAHY L QIQPRVVS +
Sbjct: 61 FAHELGRLEPETQKEIAHYTLAQIQPRVVS----------------------------FE 92
Query: 371 KMVLIIREKLAELYESEEQWSRAAQMLSGIDLDSGIRMMDEAYKLSKCVQIARLYLEDDD 550
+ VLIIREKLAELYESE+QWS+AAQMLSGIDLDSG+R++D++++LSKCVQIARLYLEDDD
Sbjct: 93 EQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDSFRLSKCVQIARLYLEDDD 152
Query: 551 AVNAEAFINKASFLVSGSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQRQIG 730
AVNAEAFINKASFLVS SQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIE+RQI
Sbjct: 153 AVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIE 212
Query: 731 EELIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 910
+E IDE+ALEQAL+AAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL
Sbjct: 213 DETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 272
Query: 911 RKPEIDAFAEELKAHQKALLPDKFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPE 1090
RKPEIDAF+EELKAHQKALLPD FTVLDRAMIEHNLLSASKLYTNISFEELGTLLGI P
Sbjct: 273 RKPEIDAFSEELKAHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIPPH 332
Query: 1091 KAEKIASRMIYEDRMRGSIDQVEAFIHFEDDTEELQQWDEQIVGLCQALNDVLDGMAKRG 1270
KAEKIASRMIYEDRMRGSIDQVEA IHFEDDT ELQQWD+QIVGLCQALNDVLD MAK+G
Sbjct: 333 KAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTVELQQWDQQIVGLCQALNDVLDSMAKKG 392
Query: 1271 LTIPV 1285
L+IPV
Sbjct: 393 LSIPV 397
>ref|XP_003539372.1| PREDICTED: COP9 signalosome complex subunit 4-like [Glycine max]
Length = 397
Score = 664 bits (1714), Expect = 0.0
Identities = 345/425 (81%), Positives = 376/425 (88%)
Frame = +2
Query: 11 MESAIASASAITDQRQKIEQYKQILTTVLASNDVTQAKKFIDHMVSDDVPLVVSRQLLQS 190
MESA ASASAITDQRQKIEQYKQIL V++SND+ QA+KFIDHM+SDDVPLVVSRQLLQ+
Sbjct: 1 MESAFASASAITDQRQKIEQYKQILAAVISSNDIVQARKFIDHMLSDDVPLVVSRQLLQT 60
Query: 191 FSQDLGTLEPEAQKEIAHYALVQIQPRVVSXXXXXXXXXXXXXXXXXXXXXQIPCLDSYW 370
F+Q+LG LEPE QKEIAHYAL QIQPRVVS +
Sbjct: 61 FAQELGRLEPEIQKEIAHYALAQIQPRVVS----------------------------FE 92
Query: 371 KMVLIIREKLAELYESEEQWSRAAQMLSGIDLDSGIRMMDEAYKLSKCVQIARLYLEDDD 550
+ VL+IREKLAELYESE+QWS+AAQMLSGIDLDSG+R++D+A++LSKCVQIA LYLEDDD
Sbjct: 93 EQVLVIREKLAELYESEKQWSKAAQMLSGIDLDSGMRVIDDAFRLSKCVQIACLYLEDDD 152
Query: 551 AVNAEAFINKASFLVSGSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQRQIG 730
AVNAEAFINKASFLVS SQHEVLNL+YKVCYARILDLKRKFLEAALRYYDISQIE+RQIG
Sbjct: 153 AVNAEAFINKASFLVSNSQHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRQIG 212
Query: 731 EELIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 910
+E I+E+ALEQAL+AAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL
Sbjct: 213 DEEINEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERIL 272
Query: 911 RKPEIDAFAEELKAHQKALLPDKFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIAPE 1090
RKPEIDAFAEELK HQ+ALLPD FTVLDRAMIEHNLLSASKLYTNISF ELGTLLGI P
Sbjct: 273 RKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSASKLYTNISFNELGTLLGIPPH 332
Query: 1091 KAEKIASRMIYEDRMRGSIDQVEAFIHFEDDTEELQQWDEQIVGLCQALNDVLDGMAKRG 1270
KAEKIASRMIYEDRMRGSIDQVEA IHF+DDTEELQ+WD+QIVGLCQALNDVLD MAK+G
Sbjct: 333 KAEKIASRMIYEDRMRGSIDQVEAVIHFDDDTEELQRWDQQIVGLCQALNDVLDSMAKKG 392
Query: 1271 LTIPV 1285
+PV
Sbjct: 393 FPVPV 397