BLASTX nr result
ID: Coptis23_contig00005224
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005224
(1515 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263856.1| PREDICTED: glutamine synthetase cytosolic is... 286 1e-94
sp|P51119.1|GLNA2_VITVI RecName: Full=Glutamine synthetase cytos... 287 1e-94
emb|CAN68162.1| hypothetical protein VITISV_015673 [Vitis vinifera] 286 3e-94
ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|2... 282 1e-93
gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK... 282 1e-93
>ref|XP_002263856.1| PREDICTED: glutamine synthetase cytosolic isozyme 2 [Vitis vinifera]
gi|296087096|emb|CBI33470.3| unnamed protein product
[Vitis vinifera]
Length = 356
Score = 286 bits (732), Expect(2) = 1e-94
Identities = 133/141 (94%), Positives = 139/141 (98%)
Frame = -2
Query: 1004 KGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDE 825
+GPYYCG GADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP+VGISAGDE
Sbjct: 154 QGPYYCGIGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDE 213
Query: 824 LWVARYILERITEIAGVVLTFDPKPIEGDWNGAGAHANYSTKSMRNDGGYEVIKKAIEKL 645
LWVARYILERITEIAGVV++FDPKPI+GDWNGAGAH NYSTKSMRNDGGYE+IKKAIEKL
Sbjct: 214 LWVARYILERITEIAGVVVSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEIIKKAIEKL 273
Query: 644 GLRHKEHIAAYGEGNERRLTG 582
GLRHKEHIAAYGEGNERRLTG
Sbjct: 274 GLRHKEHIAAYGEGNERRLTG 294
Score = 89.0 bits (219), Expect(2) = 1e-94
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -1
Query: 474 VRVGRDTEKEGKGYFEDRRPASNMDPYVVTAMIAETTILWKP 349
+RVGRDTEKEGKGYFEDRRPASNMDPYVVT+MIAETTILWKP
Sbjct: 315 IRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
>sp|P51119.1|GLNA2_VITVI RecName: Full=Glutamine synthetase cytosolic isozyme 2; AltName:
Full=Glutamate--ammonia ligase gi|1134898|emb|CAA63982.1|
glutamine synthetase [Vitis vinifera]
Length = 356
Score = 287 bits (735), Expect(2) = 1e-94
Identities = 134/141 (95%), Positives = 139/141 (98%)
Frame = -2
Query: 1004 KGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDE 825
+GPYYCG GADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDE
Sbjct: 154 QGPYYCGIGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDE 213
Query: 824 LWVARYILERITEIAGVVLTFDPKPIEGDWNGAGAHANYSTKSMRNDGGYEVIKKAIEKL 645
LWVARYILERITEIAGVV++FDPKPI+GDWNGAGAH NYSTKSMRNDGGYE+IKKAIEKL
Sbjct: 214 LWVARYILERITEIAGVVVSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEIIKKAIEKL 273
Query: 644 GLRHKEHIAAYGEGNERRLTG 582
GLRHKEHIAAYGEGNERRLTG
Sbjct: 274 GLRHKEHIAAYGEGNERRLTG 294
Score = 87.4 bits (215), Expect(2) = 1e-94
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = -1
Query: 474 VRVGRDTEKEGKGYFEDRRPASNMDPYVVTAMIAETTILWKP 349
+RVGRDTEKEGKGYFEDRRPASNMDPYVVT+MIAE+TILWKP
Sbjct: 315 IRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAESTILWKP 356
>emb|CAN68162.1| hypothetical protein VITISV_015673 [Vitis vinifera]
Length = 356
Score = 286 bits (732), Expect(2) = 3e-94
Identities = 133/141 (94%), Positives = 139/141 (98%)
Frame = -2
Query: 1004 KGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDE 825
+GPYYCG GADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP+VGISAGDE
Sbjct: 154 QGPYYCGIGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDE 213
Query: 824 LWVARYILERITEIAGVVLTFDPKPIEGDWNGAGAHANYSTKSMRNDGGYEVIKKAIEKL 645
LWVARYILERITEIAGVV++FDPKPI+GDWNGAGAH NYSTKSMRNDGGYE+IKKAIEKL
Sbjct: 214 LWVARYILERITEIAGVVVSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEIIKKAIEKL 273
Query: 644 GLRHKEHIAAYGEGNERRLTG 582
GLRHKEHIAAYGEGNERRLTG
Sbjct: 274 GLRHKEHIAAYGEGNERRLTG 294
Score = 87.4 bits (215), Expect(2) = 3e-94
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = -1
Query: 474 VRVGRDTEKEGKGYFEDRRPASNMDPYVVTAMIAETTILWKP 349
+RVGRDTEKEGKGYFEDRRPASNMDPYVVT+MIAE+TILWKP
Sbjct: 315 IRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAESTILWKP 356
>ref|XP_002301683.1| predicted protein [Populus trichocarpa] gi|222843409|gb|EEE80956.1|
predicted protein [Populus trichocarpa]
Length = 358
Score = 282 bits (722), Expect(2) = 1e-93
Identities = 130/141 (92%), Positives = 138/141 (97%)
Frame = -2
Query: 1004 KGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDE 825
+GPYYCGAG DKAFGRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGP+VGIS+GDE
Sbjct: 154 QGPYYCGAGVDKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDE 213
Query: 824 LWVARYILERITEIAGVVLTFDPKPIEGDWNGAGAHANYSTKSMRNDGGYEVIKKAIEKL 645
LW ARYILERITE+AGVVL+FDPKPI+GDWNGAGAH NYSTKSMRN+GGYEVIKKAIEKL
Sbjct: 214 LWAARYILERITEVAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNEGGYEVIKKAIEKL 273
Query: 644 GLRHKEHIAAYGEGNERRLTG 582
GLRHKEHIAAYGEGNERRLTG
Sbjct: 274 GLRHKEHIAAYGEGNERRLTG 294
Score = 89.0 bits (219), Expect(2) = 1e-93
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -1
Query: 474 VRVGRDTEKEGKGYFEDRRPASNMDPYVVTAMIAETTILWKP 349
+RVGRDTEKEGKGYFEDRRPASNMDPYVVT+MIAETTILWKP
Sbjct: 315 IRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
>gb|ABK94934.1| unknown [Populus trichocarpa] gi|118486859|gb|ABK95264.1| unknown
[Populus trichocarpa]
Length = 356
Score = 282 bits (722), Expect(2) = 1e-93
Identities = 130/141 (92%), Positives = 138/141 (97%)
Frame = -2
Query: 1004 KGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDE 825
+GPYYCGAG DKAFGRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGP+VGIS+GDE
Sbjct: 154 QGPYYCGAGVDKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDE 213
Query: 824 LWVARYILERITEIAGVVLTFDPKPIEGDWNGAGAHANYSTKSMRNDGGYEVIKKAIEKL 645
LW ARYILERITE+AGVVL+FDPKPI+GDWNGAGAH NYSTKSMRN+GGYEVIKKAIEKL
Sbjct: 214 LWAARYILERITEVAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNEGGYEVIKKAIEKL 273
Query: 644 GLRHKEHIAAYGEGNERRLTG 582
GLRHKEHIAAYGEGNERRLTG
Sbjct: 274 GLRHKEHIAAYGEGNERRLTG 294
Score = 89.0 bits (219), Expect(2) = 1e-93
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -1
Query: 474 VRVGRDTEKEGKGYFEDRRPASNMDPYVVTAMIAETTILWKP 349
+RVGRDTEKEGKGYFEDRRPASNMDPYVVT+MIAETTILWKP
Sbjct: 315 IRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356