BLASTX nr result

ID: Coptis23_contig00005210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005210
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...    84   8e-30
ref|XP_002511034.1| ankyrin repeat-containing protein, putative ...    93   8e-29
ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein...    82   2e-27
ref|XP_002279591.2| PREDICTED: ankyrin repeat-containing protein...    67   3e-21
ref|XP_002521359.1| ankyrin repeat-containing protein, putative ...    64   1e-20

>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 83.6 bits (205), Expect(2) = 8e-30
 Identities = 45/122 (36%), Positives = 74/122 (60%)
 Frame = +2

Query: 119 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLQIASMFGHVDFARQILQLQQ 298
           M+ R+ +A  SG       LL EDP +L   +L+S E+ L ++S+ GH++  R++   + 
Sbjct: 1   MDSRLSDAILSGDIAAFRSLLAEDPLILDRISLNSTENPLHLSSLAGHLEITREVACQKP 60

Query: 299 SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEIYVQRNIYGRSPFHCAVIK 478
           + A ELNQDG+S +HI+S++G+VE+V  LL  G +  +LK         G++P H A +K
Sbjct: 61  AFARELNQDGFSPVHIASSNGHVELVRELLRVGYDICLLK------GKDGKTPLHLAAMK 114

Query: 479 GK 484
           G+
Sbjct: 115 GR 116



 Score = 73.9 bits (180), Expect(2) = 8e-30
 Identities = 38/85 (44%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
 Frame = +1

Query: 457 ISLCSYQGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKL-- 630
           + L + +G++ +++ L+ ACP+S  E+T   ETVLH+AVK+NQ EA   L+E +I KL  
Sbjct: 108 LHLAAMKGRVDIVKELVCACPQSVKEVTICGETVLHVAVKSNQAEAVKVLLE-EIKKLDM 166

Query: 631 --LINFIDNEGNNILHLATARKQYQ 699
             ++N+ D +GN I+HLAT RKQ++
Sbjct: 167 MEIVNWKDKDGNTIMHLATLRKQHE 191


>ref|XP_002511034.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223550149|gb|EEF51636.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 320

 Score = 93.2 bits (230), Expect(2) = 8e-29
 Identities = 55/122 (45%), Positives = 79/122 (64%)
 Frame = +2

Query: 119 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLQIASMFGHVDFARQILQLQQ 298
           M+ R+LEAA+SG+   + +LL E+P +L + AL S E+ L IAS+ GHVDF + +L+L+ 
Sbjct: 1   MDARLLEAAQSGNIVYLHQLLAENPLILLSTALFSSENPLHIASIAGHVDFVKDLLRLKP 60

Query: 299 SSALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEIYVQRNIYGRSPFHCAVIK 478
             A ELNQDGYS MH+++T G+VEIV    E  +  S L  +   R    ++P H A IK
Sbjct: 61  EFAQELNQDGYSPMHMAATIGHVEIVR---ELAKVDSRLCRV---RGKQKKTPLHLAAIK 114

Query: 479 GK 484
           G+
Sbjct: 115 GR 116



 Score = 60.8 bits (146), Expect(2) = 8e-29
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = +1

Query: 457 ISLCSYQGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIE---GQISK 627
           + L + +G+  V  V+L++CP+   ++T + ET +H AVKNNQ  A   L++   G   +
Sbjct: 108 LHLAAIKGRAEVTSVMLMSCPDCIEDVTVRGETAVHQAVKNNQFHAVNVLVDWIRGTNRE 167

Query: 628 LLINFIDNEGNNILHLATARKQYQAR 705
            ++N  D  GN +LHLA  +KQ QA+
Sbjct: 168 EMLNVKDELGNTVLHLAAWKKQRQAK 193


>ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 430

 Score = 82.0 bits (201), Expect(2) = 2e-27
 Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
 Frame = +2

Query: 119 MNGRVLEAARSGSTETMLELLREDPSVLATFALSSRESLLQIASMFGHVDFARQILQLQQ 298
           M+  + +AA+ GS E +L+LL  DP +L   A ++ ++ L + +M GH+DFA+++L+ + 
Sbjct: 1   MDPLLFKAAKDGSIEALLKLLESDPLILERVATTTADTPLHVVAMLGHLDFAKEVLKYKT 60

Query: 299 S---SALELNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEIYVQRNIYGRSPFHCA 469
           +      ELNQ GYS +H+++ +G+V +V MLL       I  E+   R   G +P H A
Sbjct: 61  NVVEYVKELNQHGYSPIHLAAANGHVNVVEMLL------GISHELCYLRGKGGLTPLHYA 114

Query: 470 VIKGK 484
            IKG+
Sbjct: 115 SIKGR 119



 Score = 67.4 bits (163), Expect(2) = 2e-27
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = +1

Query: 469 SYQGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEG---QISKLLIN 639
           S +G+   + +LL + P    E T++ ET LH+AV+NNQ EA   L+EG     + ++IN
Sbjct: 115 SIKGRADTISLLLSSSPLCVVEETERGETALHIAVRNNQLEALRVLVEGLKRSNNLVIIN 174

Query: 640 FIDNEGNNILHLATARKQYQ 699
           + D EGN ILHLA ARK +Q
Sbjct: 175 WKDREGNTILHLAAARKNHQ 194


>ref|XP_002279591.2| PREDICTED: ankyrin repeat-containing protein At2g01680-like [Vitis
           vinifera]
          Length = 486

 Score = 67.4 bits (163), Expect(2) = 3e-21
 Identities = 40/115 (34%), Positives = 65/115 (56%)
 Frame = +2

Query: 137 EAARSGSTETMLELLREDPSVLATFALSSRESLLQIASMFGHVDFARQILQLQQSSALEL 316
           EAA  GS  ++ ELL +DP ++    L+  E+ L IA++ GH DFA++IL  +   A EL
Sbjct: 4   EAAAQGSVTSLYELLLKDPLIIDRVMLNYTETPLHIAALLGHADFAKEILLQKPELAAEL 63

Query: 317 NQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEIYVQRNIYGRSPFHCAVIKG 481
           +    S +H+++  G +EIV  LL       +  E+ +  +  GR+P H A ++G
Sbjct: 64  DYRRSSPLHLAAAKGYIEIVKELL------FVNPEMCLACDRDGRNPVHLAAMRG 112



 Score = 61.2 bits (147), Expect(2) = 3e-21
 Identities = 35/98 (35%), Positives = 55/98 (56%)
 Frame = +1

Query: 457 ISLCSYQGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKLLI 636
           + L + +G +HV++ L+ A P + +    + ET+LHL VK+NQ EA   L+E   +  ++
Sbjct: 105 VHLAAMRGHVHVLKELVQAKPHATWAALPRGETILHLCVKHNQLEALKLLVETADAHEIM 164

Query: 637 NFIDNEGNNILHLATARKQYQARASKLFINFLLQQVFI 750
           +  D+ G  ILHLA A KQ +       IN+LL    I
Sbjct: 165 SAKDDNGFTILHLAVADKQLET------INYLLSSTSI 196


>ref|XP_002521359.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223539437|gb|EEF41027.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 474

 Score = 63.5 bits (153), Expect(2) = 1e-20
 Identities = 35/81 (43%), Positives = 53/81 (65%)
 Frame = +1

Query: 457 ISLCSYQGKIHVMEVLLIACPESAYELTDQSETVLHLAVKNNQREAFWFLIEGQISKLLI 636
           + L + +G++ V++ L++A PESA E+ D  +TVLHL VK N  EA   LIE   +  L+
Sbjct: 113 LHLAAMKGRVEVIQELVMASPESASEMLD-GDTVLHLCVKYNLLEALKLLIEMVNNDELV 171

Query: 637 NFIDNEGNNILHLATARKQYQ 699
           N  + +GN ILHLA+  KQ++
Sbjct: 172 NKANQDGNTILHLASMLKQFK 192



 Score = 62.8 bits (151), Expect(2) = 1e-20
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +2

Query: 137 EAARSGSTETMLELLREDPSVLATFALSS-RESLLQIASMFGHVDFARQILQLQQSSALE 313
           EAA+ GS   +  L+++D  +L   + ++  E+ L I+S+ GH+DF R IL+     A E
Sbjct: 11  EAAKRGSVAILDTLIQKDQFILNKVSFTTFPETPLHISSLLGHLDFTRAILENCPKMASE 70

Query: 314 LNQDGYSAMHISSTHGNVEIVTMLLEFGRNHSILKEIYVQRNIYGRSPFHCAVIKGK 484
           ++    S +H++S  G+ EIV  LL          ++YV R+   R P H A +KG+
Sbjct: 71  IDSLNRSPLHLASAEGHTEIVKALLR------AYADVYVVRDQDDRIPLHLAAMKGR 121


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