BLASTX nr result

ID: Coptis23_contig00005209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005209
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [S...   127   2e-27
ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group] g...   126   4e-27
gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indi...   126   4e-27
ref|NP_001147285.1| chemocyanin precursor [Zea mays] gi|19560948...   119   8e-25
ref|XP_002464007.1| hypothetical protein SORBIDRAFT_01g010500 [S...   117   3e-24

>ref|XP_002449820.1| hypothetical protein SORBIDRAFT_05g023920 [Sorghum bicolor]
           gi|241935663|gb|EES08808.1| hypothetical protein
           SORBIDRAFT_05g023920 [Sorghum bicolor]
          Length = 126

 Score =  127 bits (319), Expect = 2e-27
 Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
 Frame = -2

Query: 635 MRRRKCMKVLF---LALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTL 465
           M R  C  VL     +LL+ + L +++  TH VG++ GWGFSVSY  W+  K+FAAGDTL
Sbjct: 1   MGRGMCSAVLVALGFSLLVCSALVSAE--THVVGDSKGWGFSVSYDSWSGGKTFAAGDTL 58

Query: 464 VFNYPASAHNVVPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSG 285
           VFNY A  HN V V  + YRSCK   +  A A A+G  +F LKKG NYFIC   GHC++G
Sbjct: 59  VFNYQAGVHNAVAVSASEYRSCKVRSAADAAATASGTARFDLKKGVNYFICGVPGHCAAG 118

Query: 284 MKIQVNA 264
           MK++V A
Sbjct: 119 MKLRVVA 125


>ref|NP_001067784.1| Os11g0428800 [Oryza sativa Japonica Group]
           gi|62734521|gb|AAX96630.1| basic blue copper protein
           [Oryza sativa Japonica Group] gi|77550421|gb|ABA93218.1|
           Plastocyanin-like domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113645006|dbj|BAF28147.1| Os11g0428800 [Oryza sativa
           Japonica Group] gi|125534214|gb|EAY80762.1| hypothetical
           protein OsI_35940 [Oryza sativa Indica Group]
           gi|125576993|gb|EAZ18215.1| hypothetical protein
           OsJ_33756 [Oryza sativa Japonica Group]
           gi|215769454|dbj|BAH01683.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 124

 Score =  126 bits (317), Expect = 4e-27
 Identities = 63/116 (54%), Positives = 77/116 (66%)
 Frame = -2

Query: 611 VLFLALLITAYLKNSDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTLVFNYPASAHNV 432
           ++ L LL  A+     A TH VG++NGW FSVS+  WA+ K FAAGDTLVFNY   AHNV
Sbjct: 8   LVVLGLLALAFSTTVLAETHVVGDSNGWDFSVSFDSWADGKVFAAGDTLVFNYKPGAHNV 67

Query: 431 VPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 264
           + V  A YRSCK   S  + A ATG   F LKKG NY+IC   GHC++GMK++V A
Sbjct: 68  LAVDAATYRSCKVGSSADSVAAATGTASFLLKKGVNYYICGVPGHCAAGMKLRVVA 123


>gb|EAZ01602.1| hypothetical protein OsI_23639 [Oryza sativa Indica Group]
          Length = 127

 Score =  126 bits (317), Expect = 4e-27
 Identities = 60/100 (60%), Positives = 70/100 (70%)
 Frame = -2

Query: 563 AATHQVGETNGWGFSVSYTDWANQKSFAAGDTLVFNYPASAHNVVPVKIAGYRSCKALPS 384
           A TH VG++ GWGFSV+Y  WA+ K+FAAGDTLVFNY A  HNVV    A YRSCK   S
Sbjct: 27  AETHVVGDSKGWGFSVAYDSWASGKAFAAGDTLVFNYQAGVHNVVAASAAEYRSCKVRNS 86

Query: 383 DMAKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 264
             A A A G+ K  LKKG NYFIC   GHC++GMK++V A
Sbjct: 87  ADAAATAAGSAKLDLKKGVNYFICGVPGHCATGMKLRVVA 126


>ref|NP_001147285.1| chemocyanin precursor [Zea mays] gi|195609488|gb|ACG26574.1|
           chemocyanin precursor [Zea mays]
           gi|413933304|gb|AFW67855.1| chemocyanin [Zea mays]
          Length = 132

 Score =  119 bits (297), Expect = 8e-25
 Identities = 59/113 (52%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
 Frame = -2

Query: 596 LLITAYLKN--SDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTLVFNYPASAHNVVPV 423
           +L+ A L+   +++A + VG+  GW F+ +   W N K F AGD LVF Y A AHNVVPV
Sbjct: 23  VLLCALLRGEFAESAVYTVGDRGGWSFNTA--SWPNGKRFRAGDVLVFRYDARAHNVVPV 80

Query: 422 KIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 264
             AGY SC A   + A+A ATGND+ TL++GANYFICS+ GHC +GMK+ V A
Sbjct: 81  SAAGYSSCSA--PEGARALATGNDRVTLRRGANYFICSFPGHCQAGMKVAVTA 131


>ref|XP_002464007.1| hypothetical protein SORBIDRAFT_01g010500 [Sorghum bicolor]
           gi|241917861|gb|EER91005.1| hypothetical protein
           SORBIDRAFT_01g010500 [Sorghum bicolor]
          Length = 128

 Score =  117 bits (292), Expect = 3e-24
 Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
 Frame = -2

Query: 611 VLFLALL-ITAYLKNSDAATHQVGETNGWGFSVSYTDWANQKSFAAGDTLVFNYPASAHN 435
           VL L LL +  + + +++A + VG+ +GW F+ +  +W   K F AGD LVF Y A AHN
Sbjct: 15  VLALVLLCVLLHGEFAESAVYTVGDRSGWSFNTA--NWPKGKRFRAGDVLVFKYNAKAHN 72

Query: 434 VVPVKIAGYRSCKALPSDMAKAQATGNDKFTLKKGANYFICSYAGHCSSGMKIQVNA 264
           VVPV  AGYRSC A      +A  TGND+ TLK+GANYFICS+ GHC  GMKI V A
Sbjct: 73  VVPVSAAGYRSCSAPRG--VRALTTGNDRVTLKRGANYFICSFPGHCQGGMKIAVTA 127


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