BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005202
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   128   2e-27
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   117   4e-24
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   117   5e-24
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...   108   3e-21
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...   105   2e-20

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  128 bits (322), Expect = 2e-27
 Identities = 105/345 (30%), Positives = 162/345 (46%), Gaps = 7/345 (2%)
 Frame = +3

Query: 84   DRLPRDITTDILSRLPLNSLFNSKFVCKAWRTIISDLTFQLTYLSKT-NHHPHLLLSCRV 260
            +RLPRDI  DILSRLP+ SL   +FVC+ WR +  D      +L +T  ++P L+L C  
Sbjct: 28   ERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCLILHCDY 87

Query: 261  SRNKLLPKIYYTRINHENLTTNTIIPKTVGVPFIDIKPMYEILILGSCNGLICLSSFKST 440
                +  +I +  I+ E+   + +  + + +PF    P +E  ++GSCNGL+CL+     
Sbjct: 88   ---PIRNQISFVDISAESRDKDMV--RKLTIPFWASMPEFE--VVGSCNGLLCLA----- 135

Query: 441  LVSNRDHLLSLMTRQERNMYVLPIHDPIYVYNPITRENQELPCFEFCNVGKNVEQVVCGF 620
                 D L                 D +YV+NP TR+ ++LP     ++    ++VV GF
Sbjct: 136  -----DSLFK---------------DAVYVHNPFTRDFKQLP----KSLQYPDQEVVFGF 171

Query: 621  GXXXXXXXXXXXXXXXYKLDDDEDENV------FSEVGVYTLGTDTWRKLKVDVPHLVFN 782
            G               Y+                SEV V TLG+ TWR L      + + 
Sbjct: 172  GYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSL----GKVSYQ 227

Query: 783  AEVAVSFEFANGSLHWIAEDVRSPVSKPFILSFNLGVEEFLVFPTPESVGMTRYYGPLEH 962
             +   S    NG LHW+    R      FI+SF+L  E+F   P P+  G++R      +
Sbjct: 228  LDRWPSEALVNGRLHWVTRPRRYVTR--FIVSFDLADEQFREIPKPDCGGLSRC-----N 280

Query: 963  CALGVLDKRLSLVDTSSGQFVDIWVVKDYDGEMSWNKQFSLGQNL 1097
              L VL   LS     S   +++WV+K+YD + SW K+F++G +L
Sbjct: 281  YHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESWIKEFNIGAHL 325


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  117 bits (294), Expect = 4e-24
 Identities = 108/359 (30%), Positives = 159/359 (44%), Gaps = 11/359 (3%)
 Frame = +3

Query: 90   LPRDITTDILSRLPLNSLFNSKFVCKAWRTIISDLTFQLTYLSKTNHH--PHLLLSCRVS 263
            LPR+I  DILSRLP+ SL   K VC+AWR +  D      YLS +     P ++L C   
Sbjct: 28   LPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHCDFP 87

Query: 264  -RNKLLPKIYYTRINHENLTTNTIIPKTVGVPFIDIKPMYEILILGSCNGLICLSSFKST 440
             RN L    +     HE         K +  PF  + P +E  ++GSCNGL+CLS     
Sbjct: 88   IRNNL---YFVDFAAHEEEKEKV---KRIRAPFSSMMPEFE--VVGSCNGLLCLS----- 134

Query: 441  LVSNRDHLLSLMTRQERNMYVLPIHDPIYVYNPITRENQELPCFEFCNVGKNVEQVVCGF 620
                 D L                +D +Y+YNP T   +ELP     ++    ++VV GF
Sbjct: 135  -----DSL---------------FNDSLYIYNPFTGRYKELP----KSLQYPDQEVVFGF 170

Query: 621  GXXXXXXXXXXXXXXXYKLDDDEDEN------VFSEVGVYTLGTDTWRKLKVDVPHLVFN 782
            G               Y+                S+V + TLG   WR L      LV  
Sbjct: 171  GFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRR 230

Query: 783  AEVAVSFEFANGSLHWIAEDVRSPVSKPFILSFNLGVEEFLVFPTPESVGMTR--YYGPL 956
            A    S    NG LHW++   R+  ++  ++SF+L  E+F   P P+  G+ R  Y+   
Sbjct: 231  A----SETLVNGRLHWVSRPCRNKPARR-LVSFDLTDEQFREVPKPDCGGLNRCDYH--- 282

Query: 957  EHCALGVLDKRLSLVDTSSGQFVDIWVVKDYDGEMSWNKQFSLGQNLICDSAVGLVRPI 1133
                L VL   LS+    +   ++IWV+K+Y+ + SW K++++G  +       LVRP+
Sbjct: 283  ----LAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPL 337


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  117 bits (293), Expect = 5e-24
 Identities = 105/343 (30%), Positives = 154/343 (44%), Gaps = 10/343 (2%)
 Frame = +3

Query: 90   LPRDITTDILSRLPLNSLFNSKFVCKAWRTIISDLTFQLTYLS---KTNHHPHLLLSCRV 260
            LPR+I  DILSRLP+ SL   K VC+AWR ++ D      YLS   +   HP L+L C  
Sbjct: 28   LPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCDF 87

Query: 261  S-RNKLLPKIYYTRINHENLTTNTIIPKTVGVPFIDIKPMYEILILGSCNGLICLSSFKS 437
              RN L    +     HE         K +  PF  + P +E  ++GSCNGL+CLS    
Sbjct: 88   PIRNNL---YFVDFAAHEEEKEKV---KRIPAPFSSMMPEFE--VVGSCNGLLCLSD--- 136

Query: 438  TLVSNRDHLLSLMTRQERNMYVLPIHDPIYVYNPITRENQELPCFEFCNVGKNVEQVVCG 617
                              ++Y    +D +Y+YNP T   +ELP     ++    ++VV G
Sbjct: 137  ------------------SLY----NDSLYIYNPFTGCYKELP----KSLQYPDQEVVSG 170

Query: 618  FGXXXXXXXXXXXXXXXYKLDDDEDEN------VFSEVGVYTLGTDTWRKLKVDVPHLVF 779
            FG               Y+                SEV + TLG   WR L      LV 
Sbjct: 171  FGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVR 230

Query: 780  NAEVAVSFEFANGSLHWIAEDVRSPVSKPFILSFNLGVEEFLVFPTPESVGMTRYYGPLE 959
             A  A+     NG LHWI+   R+  ++  ++SF+L  E+F     P+  G+ R      
Sbjct: 231  RASGAL----VNGRLHWISRPCRNKPARR-LVSFDLTDEQFREVSKPDCGGLNRC----- 280

Query: 960  HCALGVLDKRLSLVDTSSGQFVDIWVVKDYDGEMSWNKQFSLG 1088
            +  L VL   LS     +   ++IWV+K+Y+ + SW K++++G
Sbjct: 281  NYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKESWVKEYNIG 323


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
            gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
            protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
            unknown protein [Arabidopsis thaliana]
            gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
            [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
            At3g07870 [Arabidopsis thaliana]
            gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
            thaliana]
          Length = 417

 Score =  108 bits (269), Expect = 3e-21
 Identities = 98/367 (26%), Positives = 165/367 (44%), Gaps = 17/367 (4%)
 Frame = +3

Query: 84   DRLPRDITTDILSRLPLNSLFNSKFVCKAWRTIISDLTFQLTYLSKTNHHPHLLLSCRVS 263
            + LP DI  DI SRLP++S+    FVC++WR++++    +L+  S +   P LLL C   
Sbjct: 26   ESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQ-HGRLSSSSSSPTKPCLLLHC--- 81

Query: 264  RNKLLPKIYYTRINHENLTTNTIIPKTVGVPFIDIKPMYEILILGSCNGLICLSSFKSTL 443
             + +   +++  ++ E     T   K   + F    P ++  ++GSCNGL+CLS      
Sbjct: 82   DSPIRNGLHFLDLSEEEKRIKT---KKFTLRFASSMPEFD--VVGSCNGLLCLSD----- 131

Query: 444  VSNRDHLLSLMTRQERNMYVLPIHDPIYVYNPITRENQELPCFEFCNVGKNVEQVVCGFG 623
                            ++Y    +D +Y+YNP T  + ELP    C+   + +++V GFG
Sbjct: 132  ----------------SLY----NDSLYLYNPFTTNSLELP---ECSNKYHDQELVFGFG 168

Query: 624  XXXXXXXXXXXXXXXYKLDDDEDENVF----------SEVGVYTLGTDT------WRKL- 752
                           ++     +  ++          SEV + TL + T      WR L 
Sbjct: 169  FHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLG 228

Query: 753  KVDVPHLVFNAEVAVSFEFANGSLHWIAEDVRSPVSKPFILSFNLGVEEFLVFPTPESVG 932
            K     +  ++E  V     NG LH++    R    + F+ SF+L  EEF   P P+  G
Sbjct: 229  KAPYKFVKRSSEALV-----NGRLHFVTRPRRHVPDRKFV-SFDLEDEEFKEIPKPDCGG 282

Query: 933  MTRYYGPLEHCALGVLDKRLSLVDTSSGQFVDIWVVKDYDGEMSWNKQFSLGQNLICDSA 1112
            + R      H  + +     ++V  + G+ +DIWV+K Y  + SW K++S+G  L     
Sbjct: 283  LNR----TNHRLVNLKGCLCAVVYGNYGK-LDIWVMKTYGVKESWGKEYSIGTYLPKGLK 337

Query: 1113 VGLVRPI 1133
              L RP+
Sbjct: 338  QNLDRPM 344


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
            gi|223528011|gb|EEF30092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  105 bits (263), Expect = 2e-20
 Identities = 103/355 (29%), Positives = 150/355 (42%), Gaps = 17/355 (4%)
 Frame = +3

Query: 84   DRLPRDITTDILSRLPLNSLFNSKFVCKAWRTIISDLTFQLTYLSK--TNHHPHLLLSCR 257
            + LP ++  DILSRLP+  L N K VC+ WR+++        + S+   N+ P LLL C 
Sbjct: 24   ESLPCELALDILSRLPITHLINVKRVCRFWRSLVQHPLLASMHFSRIANNNDPCLLLLCD 83

Query: 258  VSRNKLLPKIYYTRINHENLTTNTIIPKTVGVPFIDIKPMYEILILGSCNGLICLSSFKS 437
            +     L  ++++ ++   + T T IP    VP I      + L++GSCNGL+ L     
Sbjct: 84   LPIKSHLYSLHFSALDETIIETVTRIP----VPVIP-----KFLVIGSCNGLLYL----- 129

Query: 438  TLVSNRDHLLSLMTRQERNMYVLPIHDPIYVYNPITRENQELPCFEFCNVGK--NVEQVV 611
                    L SL  R              Y+YNP T +  ELP       G+  N  +V 
Sbjct: 130  --------LDSLQQRAN------------YIYNPFTSDYLELP-----EPGQVLNQHRVA 164

Query: 612  CGFGXXXXXXXXXXXXXXXYKLDDDEDENV--------FSEVGVYTLGTD--TWRKLKVD 761
             GFG               Y+ + +E  N          SEV V T+G    TWR     
Sbjct: 165  TGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGNGSLTWRSKGET 224

Query: 762  VPHLVFNAEVAVSFEFANGSLHWIAEDVRSPVSKPFILSFNLGVEEFLVFPTPESVGMTR 941
               L+ N    V     NG LHW++   R+  S   ++SF+L  E+F   P P      R
Sbjct: 225  SYQLLGNPSHVV----VNGRLHWLSCRYRNQ-SLRRLISFDLADEQFREVPCPVGASFGR 279

Query: 942  ---YYGPLEHCALGVLDKRLSLVDTSSGQFVDIWVVKDYDGEMSWNKQFSLGQNL 1097
               +   L  C  GV+     L          IWV+K+Y  + SW K+F++G  L
Sbjct: 280  HCSHLATLRGCLSGVVQGFRRLY---------IWVMKEYGVKESWVKEFTIGVKL 325