BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005199
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002304067.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -2

Query: 208 RKMDDLKISPDWNTFHILIKYFYKEKLYQLAYRTMADMHSKGHQPDEK 65
           RKMD+L ISPDWNTFHILIKYF KEKLY LAYRTM DMH+KGHQP+E+
Sbjct: 440 RKMDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEE 487


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -2

Query: 208 RKMDDLKISPDWNTFHILIKYFYKEKLYQLAYRTMADMHSKGHQPDEK 65
           RKMDDL ISPD+NTFHILIKYF+KEKLY L YRT+ DMH KGHQP+E+
Sbjct: 442 RKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEE 489


>ref|XP_002304067.1| predicted protein [Populus trichocarpa] gi|222841499|gb|EEE79046.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -2

Query: 208 RKMDDLKISPDWNTFHILIKYFYKEKLYQLAYRTMADMHSKGHQPDEK 65
           RKMD+L ISPD+NTFHILIKYF KEKLY LAY+TM DMH KGHQP E+
Sbjct: 225 RKMDELAISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPAEE 272


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -2

Query: 208 RKMDDLKISPDWNTFHILIKYFYKEKLYQLAYRTMADMHSKGHQPDEK 65
           RKMD+L ISPD+NTFHILIKYF KEKLY LAY+TM DMH KGHQP E+
Sbjct: 343 RKMDELAISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEE 390


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Glycine max]
          Length = 630

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = -2

Query: 208 RKMDDLKISPDWNTFHILIKYFYKEKLYQLAYRTMADMHSKGHQPDEK 65
           +KMD+L I+P +NTFHILIKYF +EK+Y LAYRTM DMHSKGHQP E+
Sbjct: 410 KKMDELAINPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEE 457