BLASTX nr result

ID: Coptis23_contig00005198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005198
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329988.1| predicted protein [Populus trichocarpa] gi|2...   107   5e-21
ref|XP_003535309.1| PREDICTED: uncharacterized protein LOC100790...   106   9e-21
ref|XP_002318920.1| predicted protein [Populus trichocarpa] gi|2...   103   6e-20
ref|XP_002512588.1| GRIP and coiled-coil domain-containing prote...    99   2e-18
ref|XP_003555170.1| PREDICTED: uncharacterized protein LOC100776...    99   2e-18

>ref|XP_002329988.1| predicted protein [Populus trichocarpa] gi|222871413|gb|EEF08544.1|
            predicted protein [Populus trichocarpa]
          Length = 757

 Score =  107 bits (267), Expect = 5e-21
 Identities = 78/187 (41%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
 Frame = -1

Query: 1065 IKTEEGADS-SSAILAGKSFEGEKTSEAVQVTEEKIKEDIKSEFASAEIKKDT------- 910
            IK E+ +D+ S+A +  KSFEGEKT E V    E  KE+I    A  E +KD        
Sbjct: 582  IKVEDVSDAVSNAEVTEKSFEGEKTVENVVPAVEDKKEEIP---AGKETEKDQKIEGKLD 638

Query: 909  DPQSTDTEDVPSSVDTPNEPVEEQV---NSESIVEKNVDELAKAAEVSEDTPKPEASKVE 739
            +  +  +E V  S D+  E  EE+    N E+  ++ VDE+AK+     DT   E S   
Sbjct: 639  EATTIGSETVKESQDSGLEAKEEESAKNNKENSEQEKVDEIAKS-----DTQNLEPST-- 691

Query: 738  ELSKSVDVLKTNEDPPKDEVLTKPVHKQSNNILSKVKHTIVKVKKAITGKSPSSKTITSD 559
              +K  D +K ++D P+ EV  KP  K SNNIL+KVK ++VK KKAI GKSP+ KT++SD
Sbjct: 692  --TKDADDIKVSQDLPR-EVPAKPTQKHSNNILTKVKQSLVKAKKAIIGKSPTPKTVSSD 748

Query: 558  AKGDIQV 538
             KGD++V
Sbjct: 749  TKGDVKV 755


>ref|XP_003535309.1| PREDICTED: uncharacterized protein LOC100790707 [Glycine max]
          Length = 930

 Score =  106 bits (265), Expect = 9e-21
 Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
 Frame = -1

Query: 1062 KTEEGADSSSAILAGKSFEGEKTSE------AVQVTEEKIKEDIKSEFASAEIKKDTDPQ 901
            K  E  + S      + FE ++  E      A   T E +K D  S     + ++ TD +
Sbjct: 758  KEPEAPNVSPESSQEEEFESKRVEEQNEAKAATTETVESVKVDNDSSIVDDKKEEKTDSK 817

Query: 900  STDTEDVPSSVDTPNEPVEEQVNS---ESIVEKNVDELAKAAEVSEDTPKPEASKVEELS 730
                E++  ++   NEPV E + S   E  VE   D++ K     E T +PE ++  + +
Sbjct: 818  ---VEEISRAI---NEPVRETLASKFEEETVEPGADKVEK-----EQTVEPEKTEEVQAT 866

Query: 729  KSVDVLKTNEDPPKDEVLTKPVHKQSNNILSKVKHTIVKVKKAITGKSPSSKTITSDAKG 550
            K  D  KT++D PK E   KP  KQSNNI+SKVK ++VK KKAITGKSPSSK ++SDAKG
Sbjct: 867  KESDATKTSKDLPK-ETPAKPAQKQSNNIISKVKQSLVKAKKAITGKSPSSKNLSSDAKG 925

Query: 549  DIQVK 535
            DI+VK
Sbjct: 926  DIKVK 930


>ref|XP_002318920.1| predicted protein [Populus trichocarpa] gi|222857296|gb|EEE94843.1|
            predicted protein [Populus trichocarpa]
          Length = 724

 Score =  103 bits (258), Expect = 6e-20
 Identities = 71/186 (38%), Positives = 111/186 (59%), Gaps = 10/186 (5%)
 Frame = -1

Query: 1065 IKTEEGADSSS-AILAGKSFEGEKTSEAVQVTEEKIKEDIKS-----EFASAEIKKDTDP 904
            IK EE ++++S A +  KSFEGEKT E+V+   E  KE+I +     +  + E K D + 
Sbjct: 549  IKVEEVSNAASNAKITEKSFEGEKTVESVEPALENKKEEIPAIDETHKDGTIEGKLD-EA 607

Query: 903  QSTDTEDVPSSVDTPNEPVEEQ----VNSESIVEKNVDELAKAAEVSEDTPKPEASKVEE 736
             +  +E V  S D+ +E  EE+     N E+  ++ VDE+AK+          +   +E 
Sbjct: 608  TTVVSEPVKESQDSVSEAKEEEETAKTNEENSEQEKVDEIAKS----------DTQNLEY 657

Query: 735  LSKSVDVLKTNEDPPKDEVLTKPVHKQSNNILSKVKHTIVKVKKAITGKSPSSKTITSDA 556
             ++  +  K ++D P+ EV  KP  K SNNIL++VK ++VK KKAI GKSP+ KT++SD+
Sbjct: 658  STQDAEDAKESQDLPR-EVPAKPTQKHSNNILTRVKQSLVKAKKAIIGKSPTPKTVSSDS 716

Query: 555  KGDIQV 538
            KGD++V
Sbjct: 717  KGDVKV 722


>ref|XP_002512588.1| GRIP and coiled-coil domain-containing protein, putative [Ricinus
            communis] gi|223548549|gb|EEF50040.1| GRIP and
            coiled-coil domain-containing protein, putative [Ricinus
            communis]
          Length = 799

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 68/182 (37%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
 Frame = -1

Query: 1074 PVTIKTEEGADSSSAILAGKSFEGEKTSEAVQ-VTEEKIKEDIKSE-FASAEIKKDTDPQ 901
            P+ +   + A SS+ ++  +SFE E T + V+ + E K +E++  E  A  E + D D +
Sbjct: 634  PIKVDDVKNAVSSAEVIE-RSFEEEITGKGVEPIVENKGEENLTDEKLALVETRNDVDVE 692

Query: 900  STDTEDVPSSVDTPNEPVEEQVNSESIVEKNVDELAKAAEVSEDTPKPEASKVEELSKSV 721
                E   +  ++              V+++ D   K    +    K E   VEE +K  
Sbjct: 693  VKRDETTTTVAES--------------VQESQDSAVKEVSANTGEDKLEKENVEESTKGG 738

Query: 720  DVLKTNEDPPKDEVLTKPVHKQSNNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQ 541
            D +KT+ D P  EV  KP  KQSNNIL+KVK ++VK KKAI GKSPSSKT+ SD K DI+
Sbjct: 739  DDVKTSRDLPT-EVPAKPNQKQSNNILTKVKQSLVKAKKAIIGKSPSSKTLASDTKDDIK 797

Query: 540  VK 535
            VK
Sbjct: 798  VK 799


>ref|XP_003555170.1| PREDICTED: uncharacterized protein LOC100776005 [Glycine max]
          Length = 752

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 67/169 (39%), Positives = 101/169 (59%), Gaps = 14/169 (8%)
 Frame = -1

Query: 999  KTSEAVQVTEEKIKEDIKSEFASAE---------IKKDTDPQSTDT--EDVPSSVDTPNE 853
            ++S+   V  +K++E  +++ A+ E         +  D   + T+T  E++  ++   NE
Sbjct: 594  ESSQEEVVESKKVEEQNEAKAATTEAAESVKVDKVVDDKKEEKTETKVEEISRAI---NE 650

Query: 852  PVEEQVNS---ESIVEKNVDELAKAAEVSEDTPKPEASKVEELSKSVDVLKTNEDPPKDE 682
            PV E + S   E  VE   D++ K     E T +PE ++V+  +K  D  KT++D PK E
Sbjct: 651  PVRETLASKFEEESVEPGADKVEK-----EQTVEPEKTEVQA-TKENDATKTSKDLPK-E 703

Query: 681  VLTKPVHKQSNNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQVK 535
               KP  KQSNNI+SKVK ++VK KKAITGKSPSSK ++S+ KGDI+VK
Sbjct: 704  TPAKPAQKQSNNIISKVKQSLVKAKKAITGKSPSSKNLSSEPKGDIKVK 752


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