BLASTX nr result

ID: Coptis23_contig00005184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005184
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868321.1| hypothetical protein ARALYDRAFT_915500 [Arab...    72   6e-11
dbj|BAE99444.1| hypothetical protein [Arabidopsis thaliana]            72   6e-11
ref|NP_567418.1| protein ralf-like 32 [Arabidopsis thaliana] gi|...    72   6e-11
gb|AFK33335.1| unknown [Lotus japonicus]                               69   4e-10
ref|XP_003629616.1| hypothetical protein MTR_8g083150 [Medicago ...    69   5e-10

>ref|XP_002868321.1| hypothetical protein ARALYDRAFT_915500 [Arabidopsis lyrata subsp.
           lyrata] gi|297314157|gb|EFH44580.1| hypothetical protein
           ARALYDRAFT_915500 [Arabidopsis lyrata subsp. lyrata]
          Length = 116

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +2

Query: 23  ISYGSLTPNQPSCRGGTRGQSYSSSGCLPPPSNPYHTGCSKTYRC 157
           +SYG+L  NQP+C GG RG+SYS+  CLPPPSNPY  GCSK YRC
Sbjct: 69  LSYGALRRNQPACDGGKRGESYSTQ-CLPPPSNPYSRGCSKHYRC 112


>dbj|BAE99444.1| hypothetical protein [Arabidopsis thaliana]
          Length = 105

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +2

Query: 23  ISYGSLTPNQPSCRGGTRGQSYSSSGCLPPPSNPYHTGCSKTYRC 157
           +SYG+L  NQP+C GG RG+SYS+  CLPPPSNPY  GCSK YRC
Sbjct: 58  LSYGALRRNQPACDGGKRGESYSTQ-CLPPPSNPYSRGCSKHYRC 101


>ref|NP_567418.1| protein ralf-like 32 [Arabidopsis thaliana]
           gi|75318099|sp|O23262.1|RLF32_ARATH RecName:
           Full=Protein RALF-like 32; Flags: Precursor
           gi|2244757|emb|CAB10180.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268105|emb|CAB78443.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|89001071|gb|ABD59125.1| At4g14010 [Arabidopsis
           thaliana] gi|332657960|gb|AEE83360.1| protein ralf-like
           32 [Arabidopsis thaliana]
          Length = 117

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +2

Query: 23  ISYGSLTPNQPSCRGGTRGQSYSSSGCLPPPSNPYHTGCSKTYRC 157
           +SYG+L  NQP+C GG RG+SYS+  CLPPPSNPY  GCSK YRC
Sbjct: 70  LSYGALRRNQPACDGGKRGESYSTQ-CLPPPSNPYSRGCSKHYRC 113


>gb|AFK33335.1| unknown [Lotus japonicus]
          Length = 113

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = +2

Query: 23  ISYGSLTPNQPSCRGGTRGQSYSSSG-CLPPPSNPYHTGCSKTYRCRDGS 169
           IS G+L  ++P C GG  G++YS SG CLPPPSNPY+ GCSK YRCR  S
Sbjct: 64  ISPGALKRDKPVCNGGASGEAYSKSGGCLPPPSNPYNRGCSKYYRCRSDS 113


>ref|XP_003629616.1| hypothetical protein MTR_8g083150 [Medicago truncatula]
           gi|217075308|gb|ACJ86014.1| unknown [Medicago
           truncatula] gi|355523638|gb|AET04092.1| hypothetical
           protein MTR_8g083150 [Medicago truncatula]
           gi|388514669|gb|AFK45396.1| unknown [Medicago
           truncatula]
          Length = 119

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = +2

Query: 23  ISYGSLTPNQPSCRGGTRGQSYS-SSGCLPPPSNPYHTGCSKTYRCRDGS 169
           IS G+L  ++P C GG  G++YS S+GC+PPPSNPY+ GCSK YRCR  S
Sbjct: 70  ISEGALKRDKPVCNGGAGGEAYSKSAGCIPPPSNPYNRGCSKYYRCRSDS 119


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