BLASTX nr result

ID: Coptis23_contig00005170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005170
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95302.1| unknown [Populus trichocarpa]                          504   e-140
ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth...   503   e-140
ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|2...   501   e-139
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co...   498   e-139
ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|2...   494   e-137

>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  504 bits (1297), Expect = e-140
 Identities = 236/318 (74%), Positives = 270/318 (84%)
 Frame = +1

Query: 1    TDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFHW 180
            +DL++PIAIRPTSE  MYP FSKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREF W
Sbjct: 111  SDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLW 170

Query: 181  QEGHTAFATKEEADKEVLKIXXXXXXXXXXFLAVPVVKGKKSELEKFAGGLYTTSVEAFV 360
            QEGHTAFATK+EAD+EVL+I          FLA+P++KGKKSE+EKFAGGLYTTSVEAF+
Sbjct: 171  QEGHTAFATKQEADEEVLQILELYRRIYEEFLAIPIIKGKKSEMEKFAGGLYTTSVEAFI 230

Query: 361  PNTGRGVQGATSHCLGQNFAKMFDIQYDNEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDK 540
            PNTGRG+QGATSHCLGQNFAKMF+I ++NEKG +GM WQNSWAYSTRTIGVMVMVHGDDK
Sbjct: 231  PNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDK 290

Query: 541  GLVLXXXXXXXXXXXXXXXYKDADMQAIFDACSTTVKALTEAGFRVKKDLDENYSPGWKY 720
            GLVL               +KDA+ Q IFDAC+ TV  L EAG R + D  ENYSPGWKY
Sbjct: 291  GLVLPPKVSSVQVIVVPVPFKDANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWKY 350

Query: 721  SHWEMKGVPLRIEIGPKDIANKQVRVVRRDNSSKMDISTGDLAEKVGDILENIQQSLFDA 900
            SHWEMKGVPLRIEIGPKD+AN QVR VRRDN++K+DIS  +LAEKV D+L++IQ+S+FDA
Sbjct: 351  SHWEMKGVPLRIEIGPKDLANNQVRAVRRDNAAKVDISCDNLAEKVKDMLDDIQKSMFDA 410

Query: 901  AKEKRDACIKVAKTWEEF 954
            AK+KRDACI+VAKTW+EF
Sbjct: 411  AKQKRDACIQVAKTWDEF 428


>ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera]
            gi|297744088|emb|CBI37058.3| unnamed protein product
            [Vitis vinifera]
          Length = 516

 Score =  503 bits (1295), Expect = e-140
 Identities = 236/318 (74%), Positives = 266/318 (83%)
 Frame = +1

Query: 1    TDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFHW 180
            +DL++PIAIRPTSE  MYP +SKWIRGHRDLPLRLNQWCNVVRWEFS+PTPFIRSREF W
Sbjct: 130  SDLEVPIAIRPTSETVMYPYYSKWIRGHRDLPLRLNQWCNVVRWEFSHPTPFIRSREFLW 189

Query: 181  QEGHTAFATKEEADKEVLKIXXXXXXXXXXFLAVPVVKGKKSELEKFAGGLYTTSVEAFV 360
            QEGHTAFATKEEADKEVL+I          +LA+PV+KGKKSE+EKFAGG YTTSVEAF+
Sbjct: 190  QEGHTAFATKEEADKEVLEILELYRRIYEEYLAIPVIKGKKSEMEKFAGGFYTTSVEAFI 249

Query: 361  PNTGRGVQGATSHCLGQNFAKMFDIQYDNEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDK 540
            PNTGRG+QGATSHCLGQNFAKMFDI ++NEKG + MVWQNSWAYSTRTIGVMVMVHGDDK
Sbjct: 250  PNTGRGIQGATSHCLGQNFAKMFDITFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDK 309

Query: 541  GLVLXXXXXXXXXXXXXXXYKDADMQAIFDACSTTVKALTEAGFRVKKDLDENYSPGWKY 720
            GLV+               +KDAD QAIFDAC  TV  L EAGFR + DL +NYSPGWKY
Sbjct: 310  GLVMPPKVASVQIIVVPVPFKDADTQAIFDACDATVNTLNEAGFRAEADLRDNYSPGWKY 369

Query: 721  SHWEMKGVPLRIEIGPKDIANKQVRVVRRDNSSKMDISTGDLAEKVGDILENIQQSLFDA 900
            SHWEMKGVPLRIEIGPKD+ANKQ R VRRDNS+K+DI   +L E+V D+L+NIQQ+LFD 
Sbjct: 370  SHWEMKGVPLRIEIGPKDLANKQARAVRRDNSAKIDIPIVNLVEQVKDMLDNIQQNLFDV 429

Query: 901  AKEKRDACIKVAKTWEEF 954
            AK+KRDACIK  +TW+EF
Sbjct: 430  AKQKRDACIKTVRTWDEF 447


>ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|222843279|gb|EEE80826.1|
            predicted protein [Populus trichocarpa]
          Length = 498

 Score =  501 bits (1289), Expect = e-139
 Identities = 236/318 (74%), Positives = 265/318 (83%)
 Frame = +1

Query: 1    TDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFHW 180
            +DL++P+AIRPTSE  MYP FSKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREF W
Sbjct: 111  SDLEVPVAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLW 170

Query: 181  QEGHTAFATKEEADKEVLKIXXXXXXXXXXFLAVPVVKGKKSELEKFAGGLYTTSVEAFV 360
            QEGHTAFA+K+EAD+EVL+I          FLA+PV+KGKKSE+EKFAGGLYTTSVEAF+
Sbjct: 171  QEGHTAFASKQEADEEVLQILELYRRIYEEFLAIPVIKGKKSEMEKFAGGLYTTSVEAFI 230

Query: 361  PNTGRGVQGATSHCLGQNFAKMFDIQYDNEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDK 540
            PNTGRG+QGATSHCLGQNFAKMF+I ++NEKG +GM WQNSWAYSTRTIGVMVMVHGDDK
Sbjct: 231  PNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDK 290

Query: 541  GLVLXXXXXXXXXXXXXXXYKDADMQAIFDACSTTVKALTEAGFRVKKDLDENYSPGWKY 720
            GLVL               YKDAD Q IFDAC+ TV  L EAG R + D  ENYSPGWKY
Sbjct: 291  GLVLPPKVASVQVIVVPVPYKDADTQGIFDACAATVDTLCEAGIRAEADFRENYSPGWKY 350

Query: 721  SHWEMKGVPLRIEIGPKDIANKQVRVVRRDNSSKMDISTGDLAEKVGDILENIQQSLFDA 900
            SHWEMKGVPLRIEIGPKD+AN QVR VRRDN++K+DIS   L EKV D+L++IQQ LFDA
Sbjct: 351  SHWEMKGVPLRIEIGPKDLANNQVRAVRRDNAAKVDISRDSLMEKVKDMLDDIQQRLFDA 410

Query: 901  AKEKRDACIKVAKTWEEF 954
            AK+KRDACI+V KTW EF
Sbjct: 411  AKQKRDACIQVVKTWGEF 428


>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
            gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 501

 Score =  498 bits (1282), Expect = e-139
 Identities = 237/318 (74%), Positives = 266/318 (83%)
 Frame = +1

Query: 1    TDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFHW 180
            +DL++PIAIRPTSE  MYP +SKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIRSREF W
Sbjct: 114  SDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLW 173

Query: 181  QEGHTAFATKEEADKEVLKIXXXXXXXXXXFLAVPVVKGKKSELEKFAGGLYTTSVEAFV 360
            QEGHTAFATKEEAD+EVL+I          FLAVPVVKGKKSE EKFAGGLYTTSVEAF+
Sbjct: 174  QEGHTAFATKEEADEEVLQILELYRCIYEEFLAVPVVKGKKSEREKFAGGLYTTSVEAFI 233

Query: 361  PNTGRGVQGATSHCLGQNFAKMFDIQYDNEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDK 540
            PNTGRG+QGATSHCLGQNFAKMF+I ++NEKG +GMVWQNSWAYSTRTIGVMVMVHGDDK
Sbjct: 234  PNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMVWQNSWAYSTRTIGVMVMVHGDDK 293

Query: 541  GLVLXXXXXXXXXXXXXXXYKDADMQAIFDACSTTVKALTEAGFRVKKDLDENYSPGWKY 720
            GLVL               YKDAD Q IFDAC+ TV AL + G R + D  +NYSPGWKY
Sbjct: 294  GLVLPPKVASVQVIVIPVPYKDADTQGIFDACTETVDALCKVGIRAESDFRDNYSPGWKY 353

Query: 721  SHWEMKGVPLRIEIGPKDIANKQVRVVRRDNSSKMDISTGDLAEKVGDILENIQQSLFDA 900
            SHWE+KGVPLRIEIGPKD+AN QVR VRRDN++K DIS  +L E+V +IL+ IQQSLFDA
Sbjct: 354  SHWEVKGVPLRIEIGPKDLANNQVRTVRRDNATKKDISRVNLVEQVKEILDAIQQSLFDA 413

Query: 901  AKEKRDACIKVAKTWEEF 954
            AK+KRDACI+V +TW+EF
Sbjct: 414  AKQKRDACIQVVRTWDEF 431


>ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|222861709|gb|EEE99251.1|
            predicted protein [Populus trichocarpa]
          Length = 508

 Score =  494 bits (1271), Expect = e-137
 Identities = 235/327 (71%), Positives = 269/327 (82%), Gaps = 9/327 (2%)
 Frame = +1

Query: 1    TDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFHW 180
            +DL++PIAIRPTSE  MYP FSKWIRGHRDLPL+LNQWCNVVRWEFSNPTPFIR REF W
Sbjct: 110  SDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRYREFLW 169

Query: 181  QEGHTAFATKEEADKEVLKIXXXXXXXXXXFLAVPVVKGKKSELEKFAGGLYTTSVEAFV 360
            QEGHTAFATK+EAD+EVL+I          FLA+P++KGKKSE+EKFAGGLYTTSVEAF+
Sbjct: 170  QEGHTAFATKQEADEEVLQILELYRRIYEEFLAIPIIKGKKSEMEKFAGGLYTTSVEAFI 229

Query: 361  PNTGRGVQGATSHCLGQNFAKMFDIQYDNEKGGRGMVWQNSWAYSTRTIGVMVMVHGDDK 540
            PNTGRG+QGATSHCLGQNFAKMF+I ++NEKG +GM WQNSWAYSTRTIGVMVMVHGDDK
Sbjct: 230  PNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDK 289

Query: 541  GLVLXXXXXXXXXXXXXXXYKDADMQAIFDACSTTVKALTEAGFRVKKDLDENYSPGWKY 720
            GLVL               +KDA+ Q IFDAC+ TV  L EAG R + D  ENYSPGWKY
Sbjct: 290  GLVLPPKVSSVQVIVVPVPFKDANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWKY 349

Query: 721  SHWEMKGVPLRIEIGPKDIANKQ---------VRVVRRDNSSKMDISTGDLAEKVGDILE 873
            SHWEMKGVPLRIEIGPKD+AN Q         VR VRRDN++K+DIS  +LAEKV D+L+
Sbjct: 350  SHWEMKGVPLRIEIGPKDLANNQASIPSLHFTVRAVRRDNAAKVDISCDNLAEKVKDMLD 409

Query: 874  NIQQSLFDAAKEKRDACIKVAKTWEEF 954
            +IQ+S+FDAAK+KRDACI+VAKTW+EF
Sbjct: 410  DIQKSMFDAAKQKRDACIQVAKTWDEF 436


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