BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005148
         (1930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   420   e-129
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   408   e-124
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   402   e-123
ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...   405   e-123
ref|XP_002512958.1| RNA-binding protein, putative [Ricinus commu...   392   e-120

>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  420 bits (1079), Expect(2) = e-129
 Identities = 246/485 (50%), Positives = 310/485 (63%), Gaps = 11/485 (2%)
 Frame = +2

Query: 8    EETNIARKVLNNLMASSAKEVPPAIGVDSLLHQNDESI------STESVKPS----PEKY 157
            EE +IARKVL NL+ SSAK   P+          DE+I      S ES K S    PE  
Sbjct: 433  EEADIARKVLKNLITSSAKGTLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENS 492

Query: 158  RKTESTIFEQSKEDNDLETTVFVSNLPFDVDREEVKQRFSVFGEVQSFIPVLHQITKRPR 337
             K++       + ++DL+ T+F+SNLPFD+D+EEVKQ+FS FGEVQSF+PVLHQ+TKRP+
Sbjct: 493  SKSKLLNLRPIESEDDLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPK 552

Query: 338  GTGFLKFXXXXXXXXXXXXXXXXXGLGIFLKGRQLTVLKALDKTSAHNKEVEKTKIVDTD 517
            GTGFLKF                  LGIFLKGRQLT LKALDK SAH+KE++K+K  + D
Sbjct: 553  GTGFLKFNTVAAADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERD 612

Query: 518  QRNIYLAKEGVIVEXXXXXXXXXXXXMLKRQMLEKKRTTKLQSPNFHVSRTRLMIHNLPK 697
             RN+YLAKEG+IVE            M KR ML +++ TKL+SPNFHVSRTRL+I+NLPK
Sbjct: 613  HRNLYLAKEGLIVEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPK 672

Query: 698  SMTEKELKKLCVDAVLSRARKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTEHQHA 877
            SMTEKE+KKLC+DAV SRA KQ P+I+QIKFL + KKGKV +KN+SRGVAF+EFTEHQHA
Sbjct: 673  SMTEKEVKKLCIDAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHA 732

Query: 878  LVALRVLNNNPETFGPEHRPIVEFSLDNVQTLKVRKFKLQA-QQDNHTSAEDEHQNTTPE 1054
            LVALRVLNNNPETFGPEHRPIVEF+LDN+QTL+ R+ KL+A QQ NH   ED   N  P 
Sbjct: 733  LVALRVLNNNPETFGPEHRPIVEFALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPN 792

Query: 1055 ISDTRPNYXXXXXXXXXXXXGHDVSSETLVSSQGDEGEGKFPKGATEKDLSVNRKLKGNP 1234
              +  PN              +D   +T   ++GDE E K  KGA        +K K NP
Sbjct: 793  TPEASPN--KKMKSRKRKSRDNDGPLKTSEPNEGDEPEDKVIKGAVIDRHGAAKKHKINP 850

Query: 1235 SRETKGKFAYKDKTVGLTQNSNSNGEGAETNVGKSVTGANVGDGTLELRSKQNMRAVFKR 1414
            ++E +     KDK   L   +NS+G G + +  K +   +        +S +    + K+
Sbjct: 851  AKEKQ-----KDKRKKL---NNSHGIG-KPDDEKPLKAESTISKARNSKSSEESNMLPKK 901

Query: 1415 RKLDD 1429
            RKL +
Sbjct: 902  RKLQE 906



 Score = 71.6 bits (174), Expect(2) = e-129
 Identities = 29/55 (52%), Positives = 46/55 (83%)
 Frame = +3

Query: 1455 RRVNKKKTKSVSGKEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 1619
            ++   +++K  SG+ ++DKLD+L+EQYR+KFSQ+  + ++G+KQGSRQLKRWF+S
Sbjct: 918  QKTRTRRSKDPSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWFQS 972


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  408 bits (1048), Expect(2) = e-124
 Identities = 245/497 (49%), Positives = 309/497 (62%), Gaps = 22/497 (4%)
 Frame = +2

Query: 5    EEETNIARKVLNNLMASSAKEVPPAIGVDSLLHQNDESISTESVKPSPEKYRKTE----- 169
            ++E +IA+KVLNNL+ SS+K    A     L+ +N ES S E VK + EK    +     
Sbjct: 416  DKEADIAKKVLNNLLTSSSKGTS-ANNDSMLIKENKESRSDEIVKDADEKNESGKVSGVS 474

Query: 170  --------STIFEQSKEDNDLETTVFVSNLPFDVDREEVKQRFSVFGEVQSFIPVLHQIT 325
                    +    +  E++DL+ TVF+ NLPF+ D EEVKQRFS FGEV+ F+PVLHQ+T
Sbjct: 475  KPEISSRNNLSIPKRTEEDDLQGTVFICNLPFECDNEEVKQRFSGFGEVEYFVPVLHQVT 534

Query: 326  KRPRGTGFLKFXXXXXXXXXXXXXXXXXGLGIFLKGRQLTVLKALDKTSAHNKEVEKTKI 505
            KRPRGTGFLKF                 G+GI LKGR L VLKALDK SAH+KE+EK K 
Sbjct: 535  KRPRGTGFLKFKTVEAANTAISTASAASGMGILLKGRPLKVLKALDKKSAHDKELEKAKN 594

Query: 506  VDTDQRNIYLAKEGVIVEXXXXXXXXXXXXMLKRQMLEKKRTTKLQSPNFHVSRTRLMIH 685
               D RN+YLAKEG+I+E            MLKRQ LEKK+ TKLQSPNFHVSRTRL+I+
Sbjct: 595  EVHDHRNLYLAKEGLILEGTTAAEGVSASDMLKRQELEKKKKTKLQSPNFHVSRTRLIIY 654

Query: 686  NLPKSMTEKELKKLCVDAVLSRARKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTE 865
            NLPKSM EKELKKLC+DAV+SRA KQ PVIRQIKFL N KKG V  + YSRGVAFVEF+E
Sbjct: 655  NLPKSMNEKELKKLCIDAVISRATKQKPVIRQIKFLKNEKKGNVAQERYSRGVAFVEFSE 714

Query: 866  HQHALVALRVLNNNPETFGPEHRPIVEFSLDNVQTLKVRKFKLQAQ----QDNHTSAEDE 1033
            HQHALVALRVLNNNPETFGPEHRPIVEF+LDNVQTLK+RK KLQ+Q    QD++ + +++
Sbjct: 715  HQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQSQLQAPQDDNNAMDND 774

Query: 1034 HQNTTPEISDTRPNYXXXXXXXXXXXXGHD-VSSETLVSSQGDEG----EGKFPKGATEK 1198
               T   +   +P               HD  + E+ +++ G+ G     GK P+G   K
Sbjct: 775  KPGT---VEGHKP-----VKNRKRKSQEHDKPAMESALNTNGELGVAVSNGKSPQGHKSK 826

Query: 1199 DLSVNRKLKGNPSRETKGKFAYKDKTVGLTQNSNSNGEGAETNVGKSVTGANVGDGTLEL 1378
                  + KGN     K K A K+    L+    +N E  ++N G S+ G N    +   
Sbjct: 827  ------RQKGN----NKSKKALKENPEALSMKPKNN-ENGQSNGGASLEGQNTATYSNRR 875

Query: 1379 RSKQNMRAVFKRRKLDD 1429
            +S       F++RK+ +
Sbjct: 876  KSGNREDWGFRKRKIQN 892



 Score = 64.7 bits (156), Expect(2) = e-124
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +3

Query: 1470 KKTKSVSGKEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 1619
            KK K   GK+V DKLD+LIEQYRSKFS K    ++GE++ S+QL++WF+S
Sbjct: 907  KKNKDSVGKDVGDKLDMLIEQYRSKFSHKGSQENDGERKPSKQLRKWFQS 956


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
            predicted protein [Populus trichocarpa]
          Length = 974

 Score =  402 bits (1034), Expect(2) = e-123
 Identities = 233/458 (50%), Positives = 296/458 (64%), Gaps = 7/458 (1%)
 Frame = +2

Query: 5    EEETNIARKVLNNLMASSAKEVPPAIG-VDSLLHQNDESISTESVKPSPEKYRKTESTIF 181
            E+E +IARKVL NL+ASS+  +P  I  ++++   +     +E++  SP    K++ +  
Sbjct: 436  EQEADIARKVLRNLIASSSDVLPKGIEELETVDVPSKLPGESENLSGSPLSSGKSKPSNT 495

Query: 182  EQSKEDNDLETTVFVSNLPFDVDREEVKQRFSVFGEVQSFIPVLHQITKRPRGTGFLKFX 361
            +    ++DL+ TVF+SNLPFDV+  EVKQRFS FGEV SF+PVLHQ+TKRPRGTGFLKF 
Sbjct: 496  KHIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFLKFK 555

Query: 362  XXXXXXXXXXXXXXXXGLGIFLKGRQLTVLKALDKTSAHNKEVEKTKIVDTDQRNIYLAK 541
                            GLGIFLKGRQLTV KALDK SAH+KE EKTKI D D RN+YLAK
Sbjct: 556  TADGATAAVSAANVASGLGIFLKGRQLTVFKALDKKSAHDKEKEKTKIEDRDHRNLYLAK 615

Query: 542  EGVIVEXXXXXXXXXXXXMLKRQMLEKKRTTKLQSPNFHVSRTRLMIHNLPKSMTEKELK 721
            EG+I+E            M KR  L++++ TKL+SPNFHVSRTRL+++NLPKSMTEK+LK
Sbjct: 616  EGLILEGTPAAEGVSISDMAKRNRLQEEKMTKLRSPNFHVSRTRLVVYNLPKSMTEKQLK 675

Query: 722  KLCVDAVLSRARKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEFTEHQHALVALRVLN 901
            KL +DAV SRA KQ PVIRQ+KFL N KKGKV +K++SRGVAFVEFTEHQHALVALRVLN
Sbjct: 676  KLFIDAVTSRATKQKPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEHQHALVALRVLN 735

Query: 902  NNPETFGPEHRPIVEFSLDNVQTLKVRKFKLQA-QQDNHTSAEDEHQNTTPEISDTRPNY 1078
            NNPETFGPEHRPIV F+LDNVQTLK+RK KLQ  QQ+ H   +D  +N   +  +  P+ 
Sbjct: 736  NNPETFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQETHKDFQDTQENDESQTPNAIPSQ 795

Query: 1079 XXXXXXXXXXXXGHDVSSETLVSSQGDEGEGKFPKGATEKDLSVNRKLKGNPSRETKGKF 1258
                           V      S++ DE + K     + K+ +  +K K NP  E     
Sbjct: 796  KEMSRKRKSRVENRAVKDPE--SNRMDEVKNKDSYRTSLKEQTAKKK-KSNPGAEDIQTS 852

Query: 1259 AYKDKTVGLTQNSNSN-----GEGAETNVGKSVTGANV 1357
            A KDK     Q +  +      EG +++ G SV    +
Sbjct: 853  A-KDKRESREQKAKGSQHKQKDEGRKSDGGNSVNSEKI 889



 Score = 69.3 bits (168), Expect(2) = e-123
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +3

Query: 1446 NGSRRVNKKKTKSVSGKEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 1619
            +  +R   KK K   G++V DKLD+LIEQY+SKFS++  +  EGEKQ ++QLKRWF+S
Sbjct: 917  SSEKRKRPKKNKDPVGQDVADKLDMLIEQYKSKFSKQTADKPEGEKQANKQLKRWFQS 974


>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score =  405 bits (1041), Expect(2) = e-123
 Identities = 241/496 (48%), Positives = 299/496 (60%), Gaps = 21/496 (4%)
 Frame = +2

Query: 5    EEETNIARKVLNNLMASSAKEVPPAIGVDSLL-HQNDESISTESVKPSPEKYRKTESTIF 181
            ++E +IA+KVLNNL+ SS+K    ++  DS+L  +N  S S E VK + EK       + 
Sbjct: 416  DKEADIAKKVLNNLLTSSSKGT--SVNNDSMLIKENKGSRSDEIVKDADEKASNESEKVS 473

Query: 182  EQSKED--------------NDLETTVFVSNLPFDVDREEVKQRFSVFGEVQSFIPVLHQ 319
              SK +              +DL+ TVF+SNLPF+ D EEVKQRFS FGE++ F+PVLHQ
Sbjct: 474  GVSKPEISSRNNLLNPKGTEDDLQRTVFISNLPFECDNEEVKQRFSGFGEIEYFVPVLHQ 533

Query: 320  ITKRPRGTGFLKFXXXXXXXXXXXXXXXXXGLGIFLKGRQLTVLKALDKTSAHNKEVEKT 499
            +TKRPRGTGFLKF                 G+GI LKGR L VLKALDK SAH+KE+EK 
Sbjct: 534  VTKRPRGTGFLKFKTVEAANTVISTARAASGMGILLKGRPLKVLKALDKKSAHDKELEKA 593

Query: 500  KIVDTDQRNIYLAKEGVIVEXXXXXXXXXXXXMLKRQMLEKKRTTKLQSPNFHVSRTRLM 679
            K    D RN+YLAKEG+I+E            MLKR  LE+K+ TKLQSPNFHVSRTRL+
Sbjct: 594  KNEVHDHRNLYLAKEGLILEGTTAAEGVSASDMLKRLELERKKKTKLQSPNFHVSRTRLI 653

Query: 680  IHNLPKSMTEKELKKLCVDAVLSRARKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAFVEF 859
            I+NLPKSM EKELKK C+DAV+SRA KQ PVIRQIKFL N KKG V  + YSRGVAFVEF
Sbjct: 654  IYNLPKSMNEKELKKFCIDAVVSRATKQKPVIRQIKFLKNEKKGNVAQERYSRGVAFVEF 713

Query: 860  TEHQHALVALRVLNNNPETFGPEHRPIVEFSLDNVQTLKVRKFKLQAQQDNHTSAEDEHQ 1039
            +EHQHALVALRVLNNNPETFGPEHRPIVEF+LDNVQTLK+RK KLQ+Q        +   
Sbjct: 714  SEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQSQHQTPQVDNNAMD 773

Query: 1040 NTTP-EISDTRPNYXXXXXXXXXXXXGHD-VSSETLVSSQGDEG----EGKFPKGATEKD 1201
            N  P  +   +P               HD  + E+++++ G+ G     GK P+G   K 
Sbjct: 774  NDNPGTVEGCKP-----VKDRKRKSREHDEPAKESVLNTNGESGVAVANGKSPQGHKSK- 827

Query: 1202 LSVNRKLKGNPSRETKGKFAYKDKTVGLTQNSNSNGEGAETNVGKSVTGANVGDGTLELR 1381
                 + KGN     K K A K+           N E    N G S+ G N    +   +
Sbjct: 828  -----RQKGN----NKSKKALKENREAALSMKPKNNENGHNNGGASLEGQNTATDSNRRK 878

Query: 1382 SKQNMRAVFKRRKLDD 1429
            S       F++RK+ +
Sbjct: 879  SGNKDDVGFRKRKMQN 894



 Score = 65.9 bits (159), Expect(2) = e-123
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = +3

Query: 1470 KKTKSVSGKEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 1619
            KK K   GK+VVDKLD+L+EQY+SKFS K    ++GEK+ S+QL++WF+S
Sbjct: 909  KKNKGSVGKDVVDKLDMLVEQYKSKFSHKGSLENDGEKRHSKQLRKWFQS 958


>ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
            gi|223547969|gb|EEF49461.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 916

 Score =  392 bits (1008), Expect(2) = e-120
 Identities = 238/497 (47%), Positives = 314/497 (63%), Gaps = 25/497 (5%)
 Frame = +2

Query: 5    EEETNIARKVLNNLMASSAKEVPPAIGVDSLL-------HQNDESI----STESVKPS-- 145
            + E ++ARKVLN++  SS  +    I VD  +         +DE++    S  SV+ +  
Sbjct: 358  DAEADMARKVLNSITLSS--KGTSTIDVDDSVVPMGTQKPNSDETVILPKSNSSVQENMS 415

Query: 146  ----PEKYRKTEST-IFEQSKEDNDLETTVFVSNLPFDVDREEVKQRFSVFGEVQSFIPV 310
                PEK  K++S  + + + +D+DL+ TVF+SNLPFD D EEVKQRFSVFGEV+SF+PV
Sbjct: 416  GFTVPEKSGKSDSADVRKAAIDDDDLQRTVFISNLPFDADNEEVKQRFSVFGEVKSFVPV 475

Query: 311  LHQITKRPRGTGFLKFXXXXXXXXXXXXXXXXXGLGIFLKGRQLTVLKALDKTSAHNKEV 490
            LHQ+TKRPRGTGFLKF                 GLGI LKGRQLTVLKALDK SAHNKE+
Sbjct: 476  LHQVTKRPRGTGFLKFKTEDAAIAAVSAANLASGLGILLKGRQLTVLKALDKNSAHNKEM 535

Query: 491  EKTKIVDTDQRNIYLAKEGVIVEXXXXXXXXXXXXMLKRQMLEKKRTTKLQSPNFHVSRT 670
            EK K  D D RN+YLAKEGVI+E            M KR+ L +K+ TKL+SPNFHVSR 
Sbjct: 536  EKAKNEDNDHRNLYLAKEGVILEGTPASEGVSASDMDKRKALHEKKMTKLRSPNFHVSRN 595

Query: 671  RLMIHNLPKSMTEKELKKLCVDAVLSRARKQNPVIRQIKFLDNSKKGKVPSKNYSRGVAF 850
            RL+++NLP S+TEK+LKKLC+DAV+SRA KQ PVIRQIKFL ++K GKV +KN+SRGVAF
Sbjct: 596  RLVVYNLPHSVTEKKLKKLCIDAVISRATKQKPVIRQIKFLQSTKTGKV-TKNHSRGVAF 654

Query: 851  VEFTEHQHALVALRVLNNNPETFGPEHRPIVEFSLDNVQTLKVRKFKLQA-QQDNHTSAE 1027
            +EFTEHQHALVALRVLNNNPETFGPEHRPIVEF++DNVQ LK RK KL A QQDN+  ++
Sbjct: 655  IEFTEHQHALVALRVLNNNPETFGPEHRPIVEFAVDNVQKLKFRKAKLHAQQQDNNADSK 714

Query: 1028 DEHQNTTPEISDTRPNYXXXXXXXXXXXXGHDVSSETLVSSQGDEGEGKF--PKGATEKD 1201
            D   N    I    PN                  +  + +S+ +E E +    +G + + 
Sbjct: 715  DMQDN----IESHAPNDIPGEKENFRKWKSR-ADNRAMKTSEPNETEVEILVSEGTSSEK 769

Query: 1202 LSVNRKLKGNPSRE----TKGKFAYKDKTVGLTQNSNSNGEGAETNVGKSVTGANVGDGT 1369
            +S  ++ +   S +    TK KF    + V  + +  ++ +  + +VG SV G  +G  T
Sbjct: 770  ISTKKRKRNTGSDKRKTATKEKFDGAKQKVKDSVDKQNHHQVRKPDVGDSVKGELMGKIT 829

Query: 1370 LELRSKQNMRAVFKRRK 1420
             + +  +      ++RK
Sbjct: 830  RKSQPLEEAGLRLQKRK 846



 Score = 67.0 bits (162), Expect(2) = e-120
 Identities = 31/58 (53%), Positives = 40/58 (68%)
 Frame = +3

Query: 1446 NGSRRVNKKKTKSVSGKEVVDKLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 1619
            N  RR   KK K   G++VVDKLD+LIEQYRSKFS++     + EKQ ++  KRWF+S
Sbjct: 859  NSKRRKRLKKNKDPVGRDVVDKLDMLIEQYRSKFSKRTSEKPDDEKQANKPRKRWFQS 916