BLASTX nr result

ID: Coptis23_contig00005146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005146
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534772.1| PREDICTED: probable receptor-like protein ki...    73   3e-11
ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002330599.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003594535.1| Kinase-like protein [Medicago truncatula] gi...    65   4e-09
ref|XP_002890879.1| kinase family protein [Arabidopsis lyrata su...    56   3e-06

>ref|XP_003534772.1| PREDICTED: probable receptor-like protein kinase At1g30570-like
           [Glycine max]
          Length = 852

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -1

Query: 240 GSGITSIVLLAFLCTTFFCYC-GQREKTAHAKNNPPGWRPFFSIGDGTT-SAQGSKFPVG 67
           G+G+ S+ ++A +    FC+C G++++++  KNNP GWRP F  G     S  G+K   G
Sbjct: 436 GAGVASVAIVALIVGLVFCFCNGRKKQSSDTKNNPQGWRPLFLYGGAAVNSTVGAKGSAG 495

Query: 66  TLNFTGSMANTRVGKHFTLAEL 1
           T    GS+ +TRVGK FTLAE+
Sbjct: 496 TQKPYGSVGSTRVGKKFTLAEI 517


>ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|222846310|gb|EEE83857.1|
           predicted protein [Populus trichocarpa]
          Length = 840

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -1

Query: 240 GSGITSIVLLAFLCTTFFCYC-GQREKTAHAKNNPPGWRPFFSIGDGTTSAQGSKFPVGT 64
           G+G+ S +++A  CT  FC+C  QR + ++ K+NPPGWRP F  G   +S   +K    T
Sbjct: 429 GAGVASALIIAIACTCIFCFCKSQRNEMSNTKDNPPGWRPLFMHGAVLSSIANAKGGAQT 488

Query: 63  LNFTGSMAN-TRVGKHFTLAEL 1
           LN  GS+A  TRVG+ FTL+E+
Sbjct: 489 LN--GSVAAFTRVGRRFTLSEI 508


>ref|XP_002330599.1| predicted protein [Populus trichocarpa] gi|222872157|gb|EEF09288.1|
           predicted protein [Populus trichocarpa]
          Length = 836

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
 Frame = -1

Query: 240 GSGITSIVLLAFLCTTFFCYCGQREKT-AHAKNNPPGWRPFFSIGDGTTSAQGSKFPVGT 64
           G+G+ S++++A   T  FC+   R K  + AK+NPPGWRP F  G   +S   +K  V +
Sbjct: 434 GAGVASVLIIAITFTCIFCFGKNRRKQMSDAKDNPPGWRPLFMHGAVVSSIANNKGGVRS 493

Query: 63  LNFTGSM-ANTRVGKHFTLAEL 1
           LN  GS+ A+TRVG+ FTL+E+
Sbjct: 494 LN--GSLAASTRVGRRFTLSEI 513


>ref|XP_003594535.1| Kinase-like protein [Medicago truncatula]
           gi|355483583|gb|AES64786.1| Kinase-like protein
           [Medicago truncatula]
          Length = 920

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = -1

Query: 240 GSGITSIVLLAFLCTTFFCYCGQREK-TAHAKNNPPGWRPFFSIGDGTT-SAQGSKFPVG 67
           G+GI S+ ++A +    FC+C +R K ++  KNN PGWRP F  G     S  G+K   G
Sbjct: 432 GAGIASVAIVACVGVFVFCFCKRRRKESSDTKNNSPGWRPIFLYGGAAVNSTVGAKGSTG 491

Query: 66  TLNFTGSMANTRVGKHFTLAEL 1
                G++ +T  GK FTLAE+
Sbjct: 492 NQKLYGTVTSTGAGKRFTLAEI 513


>ref|XP_002890879.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336721|gb|EFH67138.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 837

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = -1

Query: 240 GSGITSIVLLAFLCTTFFCYCGQRE-KTAHAKNNPPGWRPFFSIGDGTTSAQGSKFPVGT 64
           G+GI +I+   FL     C C +R  K+  +KNNPPGWRP F   + +T+   +K   G+
Sbjct: 424 GAGIATIIFFVFLGILVVCLCKKRRNKSNESKNNPPGWRPLFLHVNNSTA--NAKATGGS 481

Query: 63  LNFTGSMANTRVGKHFTLAEL 1
           L    ++A + +G+ FTLAE+
Sbjct: 482 LRL-NTLAASTMGRKFTLAEI 501


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