BLASTX nr result

ID: Coptis23_contig00005130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005130
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138174.1| PREDICTED: uncharacterized endoplasmic retic...    89   5e-16
emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera]    84   1e-14
ref|XP_003613865.1| Endoplasmic reticulum membrane protein, puta...    84   2e-14
ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic retic...    83   3e-14
gb|ABK94463.1| unknown [Populus trichocarpa]                           80   1e-13

>ref|XP_004138174.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Cucumis sativus]
           gi|449477233|ref|XP_004154967.1| PREDICTED:
           uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Cucumis sativus]
          Length = 198

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = -1

Query: 227 MAKSESFDFEKQFAYYGAYHRNPINYFIHMLFVWPILFSFLVLLSFTPSFLKLPHHIEFS 48
           M K+  FD EKQFA+YGAYH NP+N FIH+LFVWPI F+ L+ L FTPSF  +P     S
Sbjct: 1   MGKTGLFDLEKQFAFYGAYHSNPMNIFIHVLFVWPIFFTSLMYLYFTPSFYTIPK----S 56

Query: 47  PFG---NLVLNFGLFPTL 3
           P G    LVLNFG   TL
Sbjct: 57  PCGFDHGLVLNFGFLFTL 74


>emb|CAN69808.1| hypothetical protein VITISV_019656 [Vitis vinifera]
          Length = 202

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 227 MAKSESFDFEKQFAYYGAYHRNPINYFIHMLFVWPILFSFLVLLSFTPSFLKLPHHIEFS 48
           M K   FD E+ FA+YGAYH +P+N F+HMLFVWP+ F+ LVL  FTPSF  LP  I   
Sbjct: 1   MGKMGLFDLERHFAFYGAYHSBPVNVFLHMLFVWPLFFTALVLFYFTPSFFILP-QIGLL 59

Query: 47  PFG---NLVLNFGLFPTL 3
           P G     +LNFG   TL
Sbjct: 60  PSGFNHTFLLNFGFLFTL 77


>ref|XP_003613865.1| Endoplasmic reticulum membrane protein, putative [Medicago
           truncatula] gi|355515200|gb|AES96823.1| Endoplasmic
           reticulum membrane protein, putative [Medicago
           truncatula] gi|388516613|gb|AFK46368.1| unknown
           [Medicago truncatula]
          Length = 202

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -1

Query: 227 MAKSESFDFEKQFAYYGAYHRNPINYFIHMLFVWPILFSFLVLLSFTPSFLKLPHHIEFS 48
           M ++  FD EK FA+YG+YHRNPIN  IH+LFVWPI F+ LV L FTP F  LP + EF 
Sbjct: 1   MGRTGLFDLEKHFAFYGSYHRNPINIAIHVLFVWPIFFTALVFLYFTPPFFDLP-NFEFL 59

Query: 47  PFG---NLVLNFGLFPTL 3
            FG    LV N G   TL
Sbjct: 60  LFGCNFVLVWNIGFLVTL 77


>ref|XP_002284835.1| PREDICTED: uncharacterized endoplasmic reticulum membrane protein
           C16E8.02-like [Vitis vinifera]
          Length = 202

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 227 MAKSESFDFEKQFAYYGAYHRNPINYFIHMLFVWPILFSFLVLLSFTPSFLKLPHHIEFS 48
           M K   FD E+ FA+YGAYH +P+N F+HMLFVWP+ F+ LVL  FTPSF  LP  I   
Sbjct: 1   MGKMGLFDLERHFAFYGAYHSDPVNVFLHMLFVWPLFFTALVLFYFTPSFFILP-QIGLL 59

Query: 47  PFG---NLVLNFGLFPTL 3
           P G     +LNFG   TL
Sbjct: 60  PSGFNHTFLLNFGFLFTL 77


>gb|ABK94463.1| unknown [Populus trichocarpa]
          Length = 203

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
 Frame = -1

Query: 227 MAKSESFDFEKQFAYYGAYHRNPINYFIHMLFVWPILFSFLVLLSFTPSFLKLPHHIEFS 48
           M K   FD EK +A+YGAYH NPIN  IHM+FVWPI F+  ++L FTP    LP  +E S
Sbjct: 1   MGKYGLFDLEKHYAFYGAYHSNPINILIHMIFVWPIFFASSLILYFTPPLFNLP-QVELS 59

Query: 47  PFGN----LVLNFGLFPTL 3
            FG+    L LN G F  L
Sbjct: 60  LFGSNDVVLFLNIGFFLVL 78


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