BLASTX nr result

ID: Coptis23_contig00005129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005129
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90752.1| nucleotide-binding site leucine-rich repeat prote...   124   1e-26
gb|AFC90586.1| nucleotide-binding site leucine-rich repeat prote...   124   1e-26
gb|AFC90812.1| nucleotide-binding site leucine-rich repeat prote...   123   1e-26
gb|AFC90595.1| nucleotide-binding site leucine-rich repeat prote...   123   2e-26
gb|AFC90776.1| nucleotide-binding site leucine-rich repeat prote...   122   3e-26

>gb|AFC90752.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/145 (48%), Positives = 94/145 (64%), Gaps = 4/145 (2%)
 Frame = +2

Query: 5   LRRKGKFVLILDDMWEAFDLQDLGVPKPTKDNGCKIILTTRSREVCERMLCQKYVKVEQL 184
           L R+ ++VLILDD+WEAF L+ +G+P+PT+ NGCK++LTTRS EVC RM C   V+VE L
Sbjct: 65  LSRRERYVLILDDLWEAFPLEKVGIPEPTRSNGCKLVLTTRSFEVCRRMRCTP-VRVELL 123

Query: 185 SEDEAWELFLVN-VGEE--LXXXXXXXXXXXXXXCCGLPLAIITIGRSMR-RKDVDEWRV 352
           +E+EA  LFL   VG +  L              C  LPLAI+T+G S+R  K + EWR 
Sbjct: 124 TEEEALTLFLRKAVGNDTMLPPNLEEIATQVSKECARLPLAIVTVGGSLRGLKRIREWRN 183

Query: 353 ALSDLKNSTSLNMDMTEQVIQRLKF 427
           AL++L NST    D   +V +RLKF
Sbjct: 184 ALNELINSTKDASDDESEVFERLKF 208


>gb|AFC90586.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/145 (48%), Positives = 94/145 (64%), Gaps = 4/145 (2%)
 Frame = +2

Query: 5   LRRKGKFVLILDDMWEAFDLQDLGVPKPTKDNGCKIILTTRSREVCERMLCQKYVKVEQL 184
           L R+ ++VLILDD+WEAF L+ +G+P+PT+ NGCK++LTTRS EVC RM C   V+VE L
Sbjct: 65  LSRRERYVLILDDLWEAFPLEKVGIPEPTRSNGCKLVLTTRSFEVCRRMRCTP-VRVELL 123

Query: 185 SEDEAWELFLVN-VGEE--LXXXXXXXXXXXXXXCCGLPLAIITIGRSMR-RKDVDEWRV 352
           +E+EA  LFL   VG +  L              C  LPLAI+T+G S+R  K + EWR 
Sbjct: 124 TEEEALTLFLRKAVGNDTMLPPNLEEIATQVSKECARLPLAIVTVGGSLRGLKRIREWRN 183

Query: 353 ALSDLKNSTSLNMDMTEQVIQRLKF 427
           AL++L NST    D   +V +RLKF
Sbjct: 184 ALNELINSTKDASDDESEVFERLKF 208


>gb|AFC90812.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  123 bits (309), Expect = 1e-26
 Identities = 72/145 (49%), Positives = 94/145 (64%), Gaps = 4/145 (2%)
 Frame = +2

Query: 5   LRRKGKFVLILDDMWEAFDLQDLGVPKPTKDNGCKIILTTRSREVCERMLCQKYVKVEQL 184
           L R+ ++VLILDD+WEAF L  +G+P+PT+ NGCK++LTTRS EVC RM C   V+VE L
Sbjct: 65  LSRRERYVLILDDLWEAFPLGMVGIPEPTRSNGCKLVLTTRSFEVCRRMPCTP-VRVELL 123

Query: 185 SEDEAWELFLVN-VGEE--LXXXXXXXXXXXXXXCCGLPLAIITIGRSMRR-KDVDEWRV 352
           +E+EA  LFL   VG +  L              C  LPLAI+T+G S+RR K + EWR 
Sbjct: 124 TEEEALMLFLRKAVGNDTMLPPKLEEIATQVSKECARLPLAIVTVGGSLRRLKRIREWRN 183

Query: 353 ALSDLKNSTSLNMDMTEQVIQRLKF 427
           AL++L NST    D   +V +RLKF
Sbjct: 184 ALNELINSTKDASDDESEVFERLKF 208


>gb|AFC90595.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  123 bits (308), Expect = 2e-26
 Identities = 71/145 (48%), Positives = 94/145 (64%), Gaps = 4/145 (2%)
 Frame = +2

Query: 5   LRRKGKFVLILDDMWEAFDLQDLGVPKPTKDNGCKIILTTRSREVCERMLCQKYVKVEQL 184
           L R+ ++VLILDD+WEAF L+ +G+P+PT+ NGCK++LTTRS EVC RM C   V+VE L
Sbjct: 65  LSRRERYVLILDDLWEAFPLEMVGIPEPTRSNGCKLVLTTRSFEVCRRMRCTP-VRVELL 123

Query: 185 SEDEAWELFLVN-VGEE--LXXXXXXXXXXXXXXCCGLPLAIITIGRSMR-RKDVDEWRV 352
           +E+EA  LFL   VG +  L              C  LPLAI+T+G S+R  K + EWR 
Sbjct: 124 TEEEALTLFLRKAVGNDTMLPPRLEEIATQVSKECARLPLAIVTVGGSLRGLKRIREWRN 183

Query: 353 ALSDLKNSTSLNMDMTEQVIQRLKF 427
           AL++L NST    D   +V +RLKF
Sbjct: 184 ALNELINSTKDASDDESEVFERLKF 208


>gb|AFC90776.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 264

 Score =  122 bits (306), Expect = 3e-26
 Identities = 71/145 (48%), Positives = 93/145 (64%), Gaps = 4/145 (2%)
 Frame = +2

Query: 5   LRRKGKFVLILDDMWEAFDLQDLGVPKPTKDNGCKIILTTRSREVCERMLCQKYVKVEQL 184
           L R+ ++VLILDD+WEAF L  +G+P+PT+ NGCK++LTTRS EVC RM C   V+VE L
Sbjct: 65  LSRRERYVLILDDLWEAFPLGMVGIPEPTRSNGCKLVLTTRSLEVCRRMRCTP-VRVELL 123

Query: 185 SEDEAWELFLVN-VGEE--LXXXXXXXXXXXXXXCCGLPLAIITIGRSMR-RKDVDEWRV 352
           +E+EA  LFL   VG +  L              C  LPLAI+T+G S+R  K + EWR 
Sbjct: 124 TEEEALTLFLKKAVGNDTMLPPKLEEIATQVSKECARLPLAIVTVGGSLRGLKRIREWRN 183

Query: 353 ALSDLKNSTSLNMDMTEQVIQRLKF 427
           AL++L NST    D   +V +RLKF
Sbjct: 184 ALNELINSTKDASDDESEVFERLKF 208


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