BLASTX nr result

ID: Coptis23_contig00005120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005120
         (1540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM35697.1| SGT1 [Vitis pseudoreticulata]                          245   e-105
ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinif...   244   e-104
gb|ABH03407.1| SGT1 [Pelargonium x hortorum]                          248   e-102
gb|ABH03409.1| SGT1 [Geranium maderense]                              246   e-101
gb|ABH03406.1| SGT1 [Pelargonium x hortorum]                          245   e-101

>gb|AFM35697.1| SGT1 [Vitis pseudoreticulata]
          Length = 361

 Score =  245 bits (625), Expect(2) = e-105
 Identities = 126/217 (58%), Positives = 160/217 (73%), Gaps = 3/217 (1%)
 Frame = -2

Query: 1425 FVDDNLELAVDLYSQAIDMDGNNADLFADRAQANIKLSNFTEAVSDANRAIELDTSMAKA 1246
            F+DD+ ELAVDLY+QAI+++ N+A+L+ +R+QANIKL+NFTEAV+DANRAIELD  M+KA
Sbjct: 13   FIDDHFELAVDLYNQAIEINPNHAELYVERSQANIKLNNFTEAVADANRAIELDPLMSKA 72

Query: 1245 YLRKGTACLKLEEFQTXXXXXXXXXXXAPGDARFSNLIKECDQRIAEELGDLTKQXXXXX 1066
            +LRKGTAC+KLEE+QT           APGD+RF+NLIKEC++RIAEE   L KQ     
Sbjct: 73   FLRKGTACMKLEEYQTAKAAFETGASLAPGDSRFTNLIKECEERIAEETDGLPKQSVVQA 132

Query: 1065 XXXXXXXXXXXXXADGKSDENSTLS---HQATVTTPAKPKFRHEFYQKPEEVVVTVFAKG 895
                            +S E    +   HQ  + T +KPK+RHE+YQKP+EVVVT+FAKG
Sbjct: 133  PEAV------------ESPETVVAAEKVHQVPMVTASKPKYRHEYYQKPQEVVVTIFAKG 180

Query: 894  VPAKYVVVDFGEQILSVTIDIPGEDVYHFQPRLFGKI 784
            +P + VVVDFGEQILSV+ID+PG+  YHFQPRLFGKI
Sbjct: 181  IPDENVVVDFGEQILSVSIDVPGDVAYHFQPRLFGKI 217



 Score =  163 bits (413), Expect(2) = e-105
 Identities = 81/114 (71%), Positives = 94/114 (82%)
 Frame = -3

Query: 662 KEQVVSQKLNTSSAGEAGRPTYPSSKSKSRGVNWDEIEAQVXXXXXXXKLDGDAALNKFF 483
           KE  V Q++N S++  + RPTYPSSK+  R V+WD++EAQV       KLDGDAALNKFF
Sbjct: 250 KENTVPQRINVSTSVASQRPTYPSSKT--RMVDWDKLEAQVKKEEKEEKLDGDAALNKFF 307

Query: 482 RDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWEY 321
           RDIY+ +D+D RRAM KSFVESNGTVLSTNWKEVG+KKVEGSPPDGMEMKKWEY
Sbjct: 308 RDIYKDADEDTRRAMQKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKWEY 361


>ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinifera]
            gi|302143763|emb|CBI22624.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  244 bits (624), Expect(2) = e-104
 Identities = 125/214 (58%), Positives = 157/214 (73%)
 Frame = -2

Query: 1425 FVDDNLELAVDLYSQAIDMDGNNADLFADRAQANIKLSNFTEAVSDANRAIELDTSMAKA 1246
            F+DD+ ELAVDLY+QAI+++ N+A+L+ +R+QANIKL+NFTEAV+DANRAIELD SM+KA
Sbjct: 13   FIDDHFELAVDLYTQAIEINPNHAELYVERSQANIKLNNFTEAVADANRAIELDPSMSKA 72

Query: 1245 YLRKGTACLKLEEFQTXXXXXXXXXXXAPGDARFSNLIKECDQRIAEELGDLTKQXXXXX 1066
            +LRKGTAC+KLEE+QT           APGD+RF+NLIKEC++ IAEE   L KQ     
Sbjct: 73   FLRKGTACMKLEEYQTAKAAFETGASLAPGDSRFTNLIKECEECIAEETDGLPKQSVVPA 132

Query: 1065 XXXXXXXXXXXXXADGKSDENSTLSHQATVTTPAKPKFRHEFYQKPEEVVVTVFAKGVPA 886
                          +          HQ  + T +KPK+RHE+YQKP+EVVVT+FAKGVP 
Sbjct: 133  PEAVESPETVVAAEE---------VHQVPMVTASKPKYRHEYYQKPQEVVVTIFAKGVPD 183

Query: 885  KYVVVDFGEQILSVTIDIPGEDVYHFQPRLFGKI 784
            + VVVDFGEQILSV+ID+PG+  YHFQPRLFGKI
Sbjct: 184  ENVVVDFGEQILSVSIDVPGDVAYHFQPRLFGKI 217



 Score =  163 bits (413), Expect(2) = e-104
 Identities = 81/114 (71%), Positives = 94/114 (82%)
 Frame = -3

Query: 662 KEQVVSQKLNTSSAGEAGRPTYPSSKSKSRGVNWDEIEAQVXXXXXXXKLDGDAALNKFF 483
           KE  V Q++N S++  + RPTYPSSK+  R V+WD++EAQV       KLDGDAALNKFF
Sbjct: 250 KENTVPQRINVSTSVASQRPTYPSSKT--RMVDWDKLEAQVKKEEKEEKLDGDAALNKFF 307

Query: 482 RDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWEY 321
           RDIY+ +D+D RRAM KSFVESNGTVLSTNWKEVG+KKVEGSPPDGMEMKKWEY
Sbjct: 308 RDIYKDADEDTRRAMQKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKWEY 361


>gb|ABH03407.1| SGT1 [Pelargonium x hortorum]
          Length = 367

 Score =  248 bits (634), Expect(2) = e-102
 Identities = 129/214 (60%), Positives = 155/214 (72%)
 Frame = -2

Query: 1425 FVDDNLELAVDLYSQAIDMDGNNADLFADRAQANIKLSNFTEAVSDANRAIELDTSMAKA 1246
            F+DDN +LAV+LY+QAI ++  +ADLFADRAQANIKL +FTEAV+D N+AIELD SMAKA
Sbjct: 13   FMDDNFDLAVNLYTQAIRLNPKSADLFADRAQANIKLGSFTEAVADTNKAIELDPSMAKA 72

Query: 1245 YLRKGTACLKLEEFQTXXXXXXXXXXXAPGDARFSNLIKECDQRIAEELGDLTKQXXXXX 1066
            YLRKGTAC+KLEE+ T           AP D+RF+ LIKECD+ IAEE   L K      
Sbjct: 73   YLRKGTACIKLEEYHTAKTALEGGASFAPNDSRFTKLIKECDKCIAEESNGLAKPLSSNL 132

Query: 1065 XXXXXXXXXXXXXADGKSDENSTLSHQATVTTPAKPKFRHEFYQKPEEVVVTVFAKGVPA 886
                            ++ E    SHQ  +TT +KPK+RHEFYQ+P+EVVVT+FAKG+PA
Sbjct: 133  TPSALPASAVTLE---EAKEVPNASHQPNITTASKPKYRHEFYQRPDEVVVTIFAKGIPA 189

Query: 885  KYVVVDFGEQILSVTIDIPGEDVYHFQPRLFGKI 784
            K VVVDFGEQILSV+ID+P  DVYHFQPRLFGKI
Sbjct: 190  KNVVVDFGEQILSVSIDVPSGDVYHFQPRLFGKI 223



 Score =  151 bits (382), Expect(2) = e-102
 Identities = 78/114 (68%), Positives = 91/114 (79%)
 Frame = -3

Query: 662 KEQVVSQKLNTSSAGEAGRPTYPSSKSKSRGVNWDEIEAQVXXXXXXXKLDGDAALNKFF 483
           KE VV+QK   S    + RPTYPSSK   R  +WD++EA+V       KLDGDAALNKFF
Sbjct: 256 KEIVVTQKAIVSPGVGSYRPTYPSSKP--RLTDWDKLEAEVKKEEKEEKLDGDAALNKFF 313

Query: 482 RDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWEY 321
           R+IYQ +D+D+RRAMSKSFVESNGTVLST+WKEVG+KKVEGS PDGME+KKWEY
Sbjct: 314 REIYQNADEDMRRAMSKSFVESNGTVLSTDWKEVGSKKVEGSAPDGMEVKKWEY 367


>gb|ABH03409.1| SGT1 [Geranium maderense]
          Length = 367

 Score =  246 bits (627), Expect(2) = e-101
 Identities = 128/214 (59%), Positives = 154/214 (71%)
 Frame = -2

Query: 1425 FVDDNLELAVDLYSQAIDMDGNNADLFADRAQANIKLSNFTEAVSDANRAIELDTSMAKA 1246
            F+DD+ +LAV+LY+QAI ++  +ADLFADRAQANIKL +FTEAV+D N+AIELD SMAKA
Sbjct: 13   FMDDDFDLAVNLYTQAIQLNPKSADLFADRAQANIKLGSFTEAVADTNKAIELDPSMAKA 72

Query: 1245 YLRKGTACLKLEEFQTXXXXXXXXXXXAPGDARFSNLIKECDQRIAEELGDLTKQXXXXX 1066
            YLRKGTAC+KLEE+ T           AP D+RF+ LIKECD+ IAEE   L K      
Sbjct: 73   YLRKGTACIKLEEYHTAKTALEAGASFAPNDSRFTKLIKECDKCIAEESNGLAKPLSSNL 132

Query: 1065 XXXXXXXXXXXXXADGKSDENSTLSHQATVTTPAKPKFRHEFYQKPEEVVVTVFAKGVPA 886
                            ++ E    SHQ  +TT +KPK+ HEFYQKP+EVVVT+FAKG+PA
Sbjct: 133  TPSALPASAVTLE---EAKEVPNASHQPNITTASKPKYGHEFYQKPDEVVVTIFAKGIPA 189

Query: 885  KYVVVDFGEQILSVTIDIPGEDVYHFQPRLFGKI 784
            K VVVDFGEQILSV+ID+P  DVYHFQPRLFGKI
Sbjct: 190  KNVVVDFGEQILSVSIDVPSGDVYHFQPRLFGKI 223



 Score =  151 bits (382), Expect(2) = e-101
 Identities = 77/114 (67%), Positives = 91/114 (79%)
 Frame = -3

Query: 662 KEQVVSQKLNTSSAGEAGRPTYPSSKSKSRGVNWDEIEAQVXXXXXXXKLDGDAALNKFF 483
           KE VV+QK   S    + RPTYPSSK   R  +WD++EA+V       +LDGDAALNKFF
Sbjct: 256 KEIVVTQKAIVSPGVGSYRPTYPSSKP--RLTDWDKLEAEVKKEEKGEELDGDAALNKFF 313

Query: 482 RDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWEY 321
           R+IYQ +D+D+RRAMSKSFVESNGTVLST+WKEVG+KKVEGS PDGME+KKWEY
Sbjct: 314 REIYQNADEDMRRAMSKSFVESNGTVLSTDWKEVGSKKVEGSAPDGMEVKKWEY 367


>gb|ABH03406.1| SGT1 [Pelargonium x hortorum]
          Length = 367

 Score =  245 bits (626), Expect(2) = e-101
 Identities = 128/214 (59%), Positives = 153/214 (71%)
 Frame = -2

Query: 1425 FVDDNLELAVDLYSQAIDMDGNNADLFADRAQANIKLSNFTEAVSDANRAIELDTSMAKA 1246
            F+DD+ +LAV+LY+QAI ++  +ADLFADRAQANIKL +FTEAV+D N+AIELD SMAKA
Sbjct: 13   FMDDDFDLAVNLYTQAIQLNPKSADLFADRAQANIKLGSFTEAVADTNKAIELDPSMAKA 72

Query: 1245 YLRKGTACLKLEEFQTXXXXXXXXXXXAPGDARFSNLIKECDQRIAEELGDLTKQXXXXX 1066
            YLRKGTAC+KLEE+ T           AP D+RF+ LIKECD+ IAEE   L K      
Sbjct: 73   YLRKGTACIKLEEYHTAKTALEAGASFAPNDSRFTKLIKECDKCIAEESNGLAKPLSSNL 132

Query: 1065 XXXXXXXXXXXXXADGKSDENSTLSHQATVTTPAKPKFRHEFYQKPEEVVVTVFAKGVPA 886
                            ++ E     HQ   TT +KPK+RHEFYQKP+EVVVT+FAKG+PA
Sbjct: 133  TSSALPASAVTLE---EAKEAPNALHQPNTTTASKPKYRHEFYQKPDEVVVTIFAKGIPA 189

Query: 885  KYVVVDFGEQILSVTIDIPGEDVYHFQPRLFGKI 784
            K VVVDFGEQILSV+ID+P  DVYHFQPRLFGKI
Sbjct: 190  KNVVVDFGEQILSVSIDVPSGDVYHFQPRLFGKI 223



 Score =  151 bits (382), Expect(2) = e-101
 Identities = 78/114 (68%), Positives = 91/114 (79%)
 Frame = -3

Query: 662 KEQVVSQKLNTSSAGEAGRPTYPSSKSKSRGVNWDEIEAQVXXXXXXXKLDGDAALNKFF 483
           KE VV+QK   S    + RPTYPSSK   R  +WD++EA+V       KLDGDAALNKFF
Sbjct: 256 KEIVVTQKAIVSPGVGSYRPTYPSSKP--RLTDWDKLEAEVKKEEKEEKLDGDAALNKFF 313

Query: 482 RDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWEY 321
           R+IYQ +D+D+RRAMSKSFVESNGTVLST+WKEVG+KKVEGS PDGME+KKWEY
Sbjct: 314 REIYQNADEDMRRAMSKSFVESNGTVLSTDWKEVGSKKVEGSAPDGMEVKKWEY 367


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