BLASTX nr result

ID: Coptis23_contig00005118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005118
         (1622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36578.1| ARF domain class transcription factor [Malus x do...   469   e-129
gb|AEV89794.1| indole-3-acetic acid-induced protein 4 [Vitis vin...   450   e-124
ref|XP_002285589.1| PREDICTED: auxin-responsive protein IAA9 [Vi...   449   e-123
gb|AAL92850.1| Aux/IAA protein [Vitis vinifera]                       446   e-123
ref|XP_002302351.1| predicted protein [Populus trichocarpa] gi|1...   441   e-121

>gb|ADL36578.1| ARF domain class transcription factor [Malus x domestica]
          Length = 373

 Score =  469 bits (1206), Expect = e-129
 Identities = 247/385 (64%), Positives = 290/385 (75%), Gaps = 2/385 (0%)
 Frame = -2

Query: 1621 MSPPVLGILEEGQSGVSIVGSSTSLESVCQNNAGLRERNYMGXXXXXXXXXXXXXXXXXX 1442
            MSPP+LG  EEGQS  S+V  S S++ + QN++GL+ERNY+G                  
Sbjct: 1    MSPPLLGGEEEGQSNGSMVAFSRSMDCISQNSSGLKERNYLGLSDCSSVDSSTVSNLSEG 60

Query: 1441 XXSCLNMKATELRLGLPGSQSPERNAELCLISSGNLDEKPLFPLLPSKDAIFAPKEKTVT 1262
              + LN KATELRLGLPGSQSPER  +LCL++SG LDEKPLFPLLPSKD I +  +K   
Sbjct: 61   TKNNLNFKATELRLGLPGSQSPEREPDLCLLNSGKLDEKPLFPLLPSKDGICSSSQK--- 117

Query: 1261 SSGNKRGFSDAMNGFSDVKTNAFAEGNWMFPP--SKLETAQSVNTMISSRSSLNLGVTSH 1088
             +GNKRGF+D M+GFS+VK+NA+ EGNWMF    S  E+ +SV       +S+N+ ++S 
Sbjct: 118  -NGNKRGFADTMDGFSEVKSNAYTEGNWMFHAAGSDSESPESVGQGKFPVNSINVLLSSR 176

Query: 1087 NLKDQSGVESSTLKDALPSKGSHEKPRGANEKSQNQMTVPTNSSIPPAAKAQVVGWPPIR 908
                 SG + +  K+A   +   E+    N  S N +    N S P AAKAQVVGWPPIR
Sbjct: 177  ----PSGCQPTITKEA---RTKQEQSNATNGGSHNPLGASNNGSAP-AAKAQVVGWPPIR 228

Query: 907  SFRKNTLSTNSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLKTYSAYQDLSSALEKMF 728
            SFRKN+L+T SKNN+EV+GKPGPG LFVKVSMDGAPYLRKVDL+TYS YQDLSSALEKMF
Sbjct: 229  SFRKNSLATTSKNNDEVNGKPGPGGLFVKVSMDGAPYLRKVDLRTYSTYQDLSSALEKMF 288

Query: 727  SCFTIGQCGSHGAPGREVLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCK 548
            SCFTIGQ GSHGAPGRE LSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFID+CK
Sbjct: 289  SCFTIGQYGSHGAPGRERLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCK 348

Query: 547  RMRIMKGSDAIGLAPRAMEKSRNRN 473
            R++IMKGSDAIGLAPRAMEKS+NRN
Sbjct: 349  RLKIMKGSDAIGLAPRAMEKSKNRN 373


>gb|AEV89794.1| indole-3-acetic acid-induced protein 4 [Vitis vinifera]
          Length = 359

 Score =  450 bits (1157), Expect = e-124
 Identities = 244/384 (63%), Positives = 277/384 (72%), Gaps = 1/384 (0%)
 Frame = -2

Query: 1621 MSPPVLGI-LEEGQSGVSIVGSSTSLESVCQNNAGLRERNYMGXXXXXXXXXXXXXXXXX 1445
            MSPP+LG+  EEGQS V+I+ SS S+ESVCQ ++GL+ERNYMG                 
Sbjct: 1    MSPPLLGVGEEEGQSNVTILASSASMESVCQISSGLKERNYMGLSECSSVDSSAISTDSD 60

Query: 1444 XXXSCLNMKATELRLGLPGSQSPERNAELCLISSGNLDEKPLFPLLPSKDAIFAPKEKTV 1265
               S LN+KATELRLGLPGS SP R  ELCL+SS  LDEKPLFPL PSKD  +   +KTV
Sbjct: 61   GNKSSLNLKATELRLGLPGSLSPGREPELCLLSSTKLDEKPLFPLHPSKDLTYTSSQKTV 120

Query: 1264 TSSGNKRGFSDAMNGFSDVKTNAFAEGNWMFPPSKLETAQSVNTMISSRSSLNLGVTSHN 1085
             S GNKRGF+DAMNGFS+ K  A +E               VN M+S R S N       
Sbjct: 121  VS-GNKRGFADAMNGFSEGKFLANSE---------------VNVMLSPRPSPN------- 157

Query: 1084 LKDQSGVESSTLKDALPSKGSHEKPRGANEKSQNQMTVPTNSSIPPAAKAQVVGWPPIRS 905
             K+  G + + +K+    K   E+PR  NE   N      NSS  PA KAQVVGWPPIRS
Sbjct: 158  -KENLGSQPAKMKEMASPKIVQERPRATNETPPNHTGTGNNSSSAPATKAQVVGWPPIRS 216

Query: 904  FRKNTLSTNSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLKTYSAYQDLSSALEKMFS 725
            FRKNTL+T SKN E VDGK GPGALFVKVSMDGAPYLRKVDL+ YSAYQ+LSSALEKMFS
Sbjct: 217  FRKNTLATTSKNTE-VDGKAGPGALFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFS 275

Query: 724  CFTIGQCGSHGAPGREVLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKR 545
            CFTIGQ GSHGAPGRE+LSESKL+DLLHGSEYVLTYEDKDGDWMLVGDVPW+MFI++CKR
Sbjct: 276  CFTIGQYGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWQMFIETCKR 335

Query: 544  MRIMKGSDAIGLAPRAMEKSRNRN 473
            +RIMK  DAIGLAPRA+EK +NRN
Sbjct: 336  LRIMKSCDAIGLAPRAVEKCKNRN 359


>ref|XP_002285589.1| PREDICTED: auxin-responsive protein IAA9 [Vitis vinifera]
            gi|313765825|gb|ADR80320.1| indole-3-acetic acid-induced
            protein 9 [Vitis vinifera]
          Length = 359

 Score =  449 bits (1154), Expect = e-123
 Identities = 243/384 (63%), Positives = 277/384 (72%), Gaps = 1/384 (0%)
 Frame = -2

Query: 1621 MSPPVLGI-LEEGQSGVSIVGSSTSLESVCQNNAGLRERNYMGXXXXXXXXXXXXXXXXX 1445
            MSPP+LG+  EEGQS V+I+ SS S+ESVCQ ++GL+ERNYMG                 
Sbjct: 1    MSPPLLGVGEEEGQSNVTILASSASMESVCQISSGLKERNYMGLSECSSVDSSAISTDSD 60

Query: 1444 XXXSCLNMKATELRLGLPGSQSPERNAELCLISSGNLDEKPLFPLLPSKDAIFAPKEKTV 1265
               S LN+KATELRLGLPGS SP R  ELCL+SS  LDEKPLFPL PSKD  +   +KTV
Sbjct: 61   GNKSSLNLKATELRLGLPGSLSPGREPELCLLSSTKLDEKPLFPLHPSKDLTYTSSQKTV 120

Query: 1264 TSSGNKRGFSDAMNGFSDVKTNAFAEGNWMFPPSKLETAQSVNTMISSRSSLNLGVTSHN 1085
             S GNKRGF+DAMNGFS+ K  A +E               VN M+S R S N       
Sbjct: 121  VS-GNKRGFADAMNGFSEGKFLANSE---------------VNVMLSPRPSPN------- 157

Query: 1084 LKDQSGVESSTLKDALPSKGSHEKPRGANEKSQNQMTVPTNSSIPPAAKAQVVGWPPIRS 905
             K+  G + + +K+    K   E+PR  NE   N      N+S  PA KAQVVGWPPIRS
Sbjct: 158  -KENLGSQPAKMKEMASPKIVQERPRATNETPPNHTGTGNNNSSAPATKAQVVGWPPIRS 216

Query: 904  FRKNTLSTNSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLKTYSAYQDLSSALEKMFS 725
            FRKNTL+T SKN E VDGK GPGALFVKVSMDGAPYLRKVDL+ YSAYQ+LSSALEKMFS
Sbjct: 217  FRKNTLATTSKNTE-VDGKAGPGALFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFS 275

Query: 724  CFTIGQCGSHGAPGREVLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKR 545
            CFTIGQ GSHGAPGRE+LSESKL+DLLHGSEYVLTYEDKDGDWMLVGDVPW+MFI++CKR
Sbjct: 276  CFTIGQYGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWQMFIETCKR 335

Query: 544  MRIMKGSDAIGLAPRAMEKSRNRN 473
            +RIMK  DAIGLAPRA+EK +NRN
Sbjct: 336  LRIMKSCDAIGLAPRAVEKCKNRN 359


>gb|AAL92850.1| Aux/IAA protein [Vitis vinifera]
          Length = 359

 Score =  446 bits (1148), Expect = e-123
 Identities = 242/384 (63%), Positives = 276/384 (71%), Gaps = 1/384 (0%)
 Frame = -2

Query: 1621 MSPPVLGI-LEEGQSGVSIVGSSTSLESVCQNNAGLRERNYMGXXXXXXXXXXXXXXXXX 1445
            MSPP+LG+  EEGQS V+I+ SS S+ESVCQ ++GL+ERNYMG                 
Sbjct: 1    MSPPLLGVGEEEGQSNVTILASSASMESVCQISSGLKERNYMGLSECSSVDSSAISTDSD 60

Query: 1444 XXXSCLNMKATELRLGLPGSQSPERNAELCLISSGNLDEKPLFPLLPSKDAIFAPKEKTV 1265
               S LN+KATELRLGLPG  SP R  ELCL+SS  LDEKPLFPL PSKD  +   +KTV
Sbjct: 61   GNKSSLNLKATELRLGLPGFLSPGREPELCLLSSTKLDEKPLFPLHPSKDLTYTSSQKTV 120

Query: 1264 TSSGNKRGFSDAMNGFSDVKTNAFAEGNWMFPPSKLETAQSVNTMISSRSSLNLGVTSHN 1085
             S GNKRGF+DAMNGFS+ K  A +E               VN M+S R S N       
Sbjct: 121  VS-GNKRGFADAMNGFSEGKFLANSE---------------VNVMLSPRPSPN------- 157

Query: 1084 LKDQSGVESSTLKDALPSKGSHEKPRGANEKSQNQMTVPTNSSIPPAAKAQVVGWPPIRS 905
             K+  G + + +K+    K   E+PR  NE   N      N+S  PA KAQVVGWPPIRS
Sbjct: 158  -KENLGSQPAKMKEMASPKIVQERPRATNETPPNHTGTGNNNSSAPATKAQVVGWPPIRS 216

Query: 904  FRKNTLSTNSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLKTYSAYQDLSSALEKMFS 725
            FRKNTL+T SKN E VDGK GPGALFVKVSMDGAPYLRKVDL+ YSAYQ+LSSALEKMFS
Sbjct: 217  FRKNTLATTSKNTE-VDGKAGPGALFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFS 275

Query: 724  CFTIGQCGSHGAPGREVLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKR 545
            CFTIGQ GSHGAPGRE+LSESKL+DLLHGSEYVLTYEDKDGDWMLVGDVPW+MFI++CKR
Sbjct: 276  CFTIGQYGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWQMFIETCKR 335

Query: 544  MRIMKGSDAIGLAPRAMEKSRNRN 473
            +RIMK  DAIGLAPRA+EK +NRN
Sbjct: 336  LRIMKSCDAIGLAPRAVEKCKNRN 359


>ref|XP_002302351.1| predicted protein [Populus trichocarpa] gi|118486701|gb|ABK95187.1|
            unknown [Populus trichocarpa] gi|222844077|gb|EEE81624.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  441 bits (1133), Expect = e-121
 Identities = 236/384 (61%), Positives = 277/384 (72%), Gaps = 1/384 (0%)
 Frame = -2

Query: 1621 MSPPVLGILEE-GQSGVSIVGSSTSLESVCQNNAGLRERNYMGXXXXXXXXXXXXXXXXX 1445
            MSPP+LG++EE G S V+++ S  S ES C N   L+ERNYMG                 
Sbjct: 1    MSPPLLGVVEEEGHSNVTLLASPASAESACLNGLELKERNYMGLSDCSSVDSSAVSAASD 60

Query: 1444 XXXSCLNMKATELRLGLPGSQSPERNAELCLISSGNLDEKPLFPLLPSKDAIFAPKEKTV 1265
               + LN+KATELRLGLPGSQSPERN EL L+SS  LDEKP FPL PS D  ++  +K V
Sbjct: 61   ERKTSLNLKATELRLGLPGSQSPERNHELSLLSSALLDEKPFFPLHPSNDGHYSSTQKNV 120

Query: 1264 TSSGNKRGFSDAMNGFSDVKTNAFAEGNWMFPPSKLETAQSVNTMISSRSSLNLGVTSHN 1085
             S GNKR FSDAM+ FS+               SK  +   VN M+S R S N+G+    
Sbjct: 121  VS-GNKRVFSDAMDEFSE---------------SKFLSNSEVNAMLSPRPSPNMGLKPGM 164

Query: 1084 LKDQSGVESSTLKDALPSKGSHEKPRGANEKSQNQMTVPTNSSIPPAAKAQVVGWPPIRS 905
            L++  GV+ + +K+ +  K   E+P  ANE    + +   NSS P A KAQVVGWPPI+S
Sbjct: 165  LENL-GVQQAKVKEIVAPKAGQERPHAANETRPLRNSSANNSSAP-APKAQVVGWPPIKS 222

Query: 904  FRKNTLSTNSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLKTYSAYQDLSSALEKMFS 725
            FRKN+L+T SKN EEVDGK GPGALF+KVSMDGAPYLRKVDL+ YSAYQ+LSSALEKMFS
Sbjct: 223  FRKNSLATTSKNTEEVDGKAGPGALFIKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFS 282

Query: 724  CFTIGQCGSHGAPGREVLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKR 545
            CFTIGQ GSHGAPGRE+LSESKL+DLLHGSEYVLTYEDKDGDWMLVGDVPWEMFI++CKR
Sbjct: 283  CFTIGQYGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKR 342

Query: 544  MRIMKGSDAIGLAPRAMEKSRNRN 473
            +RIMK SDAIGLAPRAMEK +NRN
Sbjct: 343  LRIMKSSDAIGLAPRAMEKCKNRN 366


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