BLASTX nr result

ID: Coptis23_contig00005112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005112
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07

>ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|222857464|gb|EEE95011.1|
           predicted protein [Populus trichocarpa]
          Length = 954

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
 Frame = +1

Query: 1   YRLLVGKLGIDQGF-VDKKPLLK-HRMLAXXXXXXXXXXXXLWDTRPYTPRLLQKKIIAY 174
           YRLLVGKLG D  F +D+ PLL  H  +A             W  R Y   L++   +  
Sbjct: 125 YRLLVGKLGEDSSFGLDQDPLLDDHSSVARLCSCCNEP----WIPRGYFQNLMRAASVGS 180

Query: 175 KVAESDGPLPGSVGYSEFNFFDGLYR*RVSGTFSPKLWI*SFISCWKQRAEVTSDSESEI 354
             A  D PL G++ +   N         +  T                  +  SD+ESE+
Sbjct: 181 GAANLDVPLSGTIKHDCSNIKKSKRSTSIRSTRRKTTGFDPLSHVGYTELKFISDTESEV 240

Query: 355 PLSDDEYSGS*NQRHKKEMAARFVQPVPHTIVSDTLLNASVEVLVPNKLID*DAIP-PSL 531
               D+  G  N   +K+++  +VQP P TI+        V+     KLID  + P PS+
Sbjct: 241 MFFSDD--GGANAATRKDISVGYVQPEPRTIIL-------VDDSASEKLIDPVSAPEPSI 291

Query: 532 LVHHEQHDVGELYHMTSSASGMATGHGLEEL 624
           L      DV + +++T++AS    GH LEEL
Sbjct: 292 LTSKVLSDVIQSHNVTATASAFPIGHDLEEL 322


>ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|222875257|gb|EEF12388.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
 Frame = +1

Query: 1   YRLLVGKLGIDQGFV--DKKPLLKHRMLAXXXXXXXXXXXXLWDTRPYTPRLLQKKIIAY 174
           YRLLVGKLG D  FV     PL  H  +              W  R Y  +L++   +  
Sbjct: 125 YRLLVGKLGEDSSFVLDQDSPLDDHSSVTRQCSCCNEP----WIPRGYCQKLMRAISVDS 180

Query: 175 KVAESDGPLPGSVGYSEFNFFDGLYR*RVSGTFSPKLWI*SFISCWKQRAEVTSDSESEI 354
             A+ D PL G++ +   N         +  T                  +  SD+ESE+
Sbjct: 181 GAADLDVPLSGAIKHDCSNLKKSKQSIPIISTRQKTSGFDHLSHVGYTELKFNSDTESEV 240

Query: 355 PLSDDEYSGS*NQRHKKEMAARFVQPVPHTIVSDTLLNASVEVLVPNKLID*DAIP-PSL 531
            LSDD+     N  H ++++  +V+P P TI   +LL+ S       KLID  + P PS+
Sbjct: 241 MLSDDDGK---NAVH-EDISVGYVKPEPCTI---SLLDDS----FTEKLIDPVSSPEPSI 289

Query: 532 LVHHEQHDVGELYHMTSSASGMATGHGLEELN 627
           L    Q D    + +T+ AS +   H LEELN
Sbjct: 290 LASKVQSDAINSHTVTAIASRVPIEHDLEELN 321


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