BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005110
         (1881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275951.1| PREDICTED: RING finger and transmembrane dom...   584   e-164
ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|2...   578   e-162
emb|CBI15794.3| unnamed protein product [Vitis vinifera]              575   e-161
ref|XP_003623658.1| RING finger protein [Medicago truncatula] gi...   572   e-160
ref|XP_003552333.1| PREDICTED: RING finger and transmembrane dom...   568   e-159

>ref|XP_002275951.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 447

 Score =  584 bits (1506), Expect = e-164
 Identities = 308/452 (68%), Positives = 330/452 (73%), Gaps = 18/452 (3%)
 Frame = +3

Query: 42   SSRRYG----GINILRYPLSALLEYSGILRTAPSRSSDSFLNGFRDXXXXXXXXPSNSNS 209
            S+ RYG      N ++ PL+ALLEYSGI  T  S S ++               PS ++ 
Sbjct: 6    SNSRYGIHIAASNFIQAPLAALLEYSGIFSTRSSSSQET----------DGLIAPSPASL 55

Query: 210  IDDXXXXXXXXXXXXXXXXXXXXXEVSIRIIGAGEHDN--------------VRXXXXXX 347
                                    EVSIRIIGAGE +               +       
Sbjct: 56   DSFHSRSDDRDRDHDPSTPASTPEEVSIRIIGAGEQEREAVSLDNDRSSSEQISEAPAVS 115

Query: 348  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRGDSSYQRYDIQQVARWIEQILPFSLLL 527
                                           N  DSSYQRYDIQQ ARWIEQILPFSLLL
Sbjct: 116  DASRNESGSGVAAVNSGGSTADGEPANGGSVNNRDSSYQRYDIQQFARWIEQILPFSLLL 175

Query: 528  LVVFIRQHLQGFFVTIWVAAVMFKSNDILRKQTALKGERKMSVLAGIAVVFLFHVIGVYW 707
            LVVFIRQHLQGFFVTIW+AAVMFKSNDILRKQTALKGERK+SVL GI  VF+ HVI VYW
Sbjct: 176  LVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGERKLSVLTGITAVFMLHVICVYW 235

Query: 708  WYRNDDLLYPLVMLPPKAIPPFWHAIFTIMVNDTMVRQAAMILKCILLMYYKNSRGRNYR 887
            WYRN+DLLYPLV+LPPKAIPPFWHAIF IMVNDTMVRQAAM LKCILLMYYKNSRGR+YR
Sbjct: 236  WYRNNDLLYPLVLLPPKAIPPFWHAIFIIMVNDTMVRQAAMALKCILLMYYKNSRGRDYR 295

Query: 888  KQGQMLTLVEYMLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQS 1067
            KQGQMLTLVEY+LLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQS
Sbjct: 296  KQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQS 355

Query: 1068 FFTALKALSHKEVHYGSYATSDQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFE 1247
            FF AL+ALS KEVHYGSYATS+QVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFE
Sbjct: 356  FFAALRALSRKEVHYGSYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFE 415

Query: 1248 RERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1343
            RERTCPLCRALVKPAD+RS+GDGSTSLFFQ+F
Sbjct: 416  RERTCPLCRALVKPADIRSYGDGSTSLFFQIF 447


>ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|222833620|gb|EEE72097.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  578 bits (1489), Expect = e-162
 Identities = 301/450 (66%), Positives = 338/450 (75%), Gaps = 5/450 (1%)
 Frame = +3

Query: 9    STGNTNTSIMDSSRRYGGIN---ILRYPLSALLEYSGILRTAPS--RSSDSFLNGFRDXX 173
            ++ ++N S   SSRRYG ++   IL+ P+S LLEYSG+LRT  S  + ++S + G     
Sbjct: 18   NSNSSNNSSPSSSRRYGMLSASSILQAPISLLLEYSGLLRTTRSSHQETESLIPG----- 72

Query: 174  XXXXXXPSNSNSIDDXXXXXXXXXXXXXXXXXXXXXEVSIRIIGAGEHDNVRXXXXXXXX 353
                     S  +D                      EV+IRIIG+GEH++ R        
Sbjct: 73   ----GGGLGSTRLDGSSAAVVSNNG-----------EVAIRIIGSGEHEHDRDSSGGLVV 117

Query: 354  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRGDSSYQRYDIQQVARWIEQILPFSLLLLV 533
                                         N  DS+YQRYDIQQ ARWIEQ+LPFSLLLLV
Sbjct: 118  GQVGGGQNESSSVGGDGEAADGAGG----NGRDSTYQRYDIQQAARWIEQVLPFSLLLLV 173

Query: 534  VFIRQHLQGFFVTIWVAAVMFKSNDILRKQTALKGERKMSVLAGIAVVFLFHVIGVYWWY 713
            VFIRQHLQGFFVTIW+A VMFKSNDILRKQTALKGERK+S+L GI++ F  HV+GVYWWY
Sbjct: 174  VFIRQHLQGFFVTIWIAVVMFKSNDILRKQTALKGERKVSMLVGISLAFAIHVVGVYWWY 233

Query: 714  RNDDLLYPLVMLPPKAIPPFWHAIFTIMVNDTMVRQAAMILKCILLMYYKNSRGRNYRKQ 893
            +NDDLLYPL+MLPPK+IPPFWHAIF IMVNDT+VRQAAM+ KCILL+ YKNSRGRNYRKQ
Sbjct: 234  QNDDLLYPLIMLPPKSIPPFWHAIFIIMVNDTLVRQAAMVFKCILLISYKNSRGRNYRKQ 293

Query: 894  GQMLTLVEYMLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFF 1073
            GQMLTLVEY++LLYRALLPTPVWYRFFLNKEYGSLFSSL TGLYLTFKLTSVVEKVQSF 
Sbjct: 294  GQMLTLVEYLMLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFC 353

Query: 1074 TALKALSHKEVHYGSYATSDQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERE 1253
             ALKALS KEVHYG+YATS+QVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERE
Sbjct: 354  AALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERE 413

Query: 1254 RTCPLCRALVKPADLRSFGDGSTSLFFQLF 1343
             TCPLCRALVKPADLRSF DGSTSL FQ+F
Sbjct: 414  GTCPLCRALVKPADLRSFSDGSTSLLFQIF 443


>emb|CBI15794.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  575 bits (1483), Expect = e-161
 Identities = 277/301 (92%), Positives = 289/301 (96%)
 Frame = +3

Query: 441  NRGDSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFKSNDILRK 620
            N  DSSYQRYDIQQ ARWIEQILPFSLLLLVVFIRQHLQGFFVTIW+AAVMFKSNDILRK
Sbjct: 117  NNRDSSYQRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRK 176

Query: 621  QTALKGERKMSVLAGIAVVFLFHVIGVYWWYRNDDLLYPLVMLPPKAIPPFWHAIFTIMV 800
            QTALKGERK+SVL GI  VF+ HVI VYWWYRN+DLLYPLV+LPPKAIPPFWHAIF IMV
Sbjct: 177  QTALKGERKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLVLLPPKAIPPFWHAIFIIMV 236

Query: 801  NDTMVRQAAMILKCILLMYYKNSRGRNYRKQGQMLTLVEYMLLLYRALLPTPVWYRFFLN 980
            NDTMVRQAAM LKCILLMYYKNSRGR+YRKQGQMLTLVEY+LLLYRALLPTPVWYRFFLN
Sbjct: 237  NDTMVRQAAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLN 296

Query: 981  KEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFTALKALSHKEVHYGSYATSDQVNAAGDLC 1160
            KEYGSLFSSLTTGLYLTFKLTSVVEKVQSFF AL+ALS KEVHYGSYATS+QVNAAGDLC
Sbjct: 297  KEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGSYATSEQVNAAGDLC 356

Query: 1161 AICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQL 1340
            AICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD+RS+GDGSTSLFFQ+
Sbjct: 357  AICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSYGDGSTSLFFQI 416

Query: 1341 F 1343
            F
Sbjct: 417  F 417


>ref|XP_003623658.1| RING finger protein [Medicago truncatula] gi|355498673|gb|AES79876.1|
            RING finger protein [Medicago truncatula]
          Length = 426

 Score =  572 bits (1473), Expect = e-160
 Identities = 305/459 (66%), Positives = 330/459 (71%), Gaps = 19/459 (4%)
 Frame = +3

Query: 24   NTSIMDSSRRYG---GINILRYPLSALLEYSGILRTAPSRSSDSFLNGFRDXXXXXXXXP 194
            N +   SSRRYG     +I++ PLSALLEYSGIL   P+RS+                 P
Sbjct: 4    NGASSSSSRRYGFPSAASIIQAPLSALLEYSGIL---PARSNQQH-------------QP 47

Query: 195  SNSNSIDDXXXXXXXXXXXXXXXXXXXXXEVSIRIIGAGEHDNVRXXXXXXXXXXXXXXX 374
               ++ +D                     EVSIRIIG+ E DN R               
Sbjct: 48   IPDSAPNDG--------------------EVSIRIIGSNEQDNHRDEQGSPLVVNDGGGA 87

Query: 375  XXXXXXXXXXXXXXXXXXXXXX----------------NRGDSSYQRYDIQQVARWIEQI 506
                                                  N  DSSYQRYDIQ  ARWIEQ+
Sbjct: 88   AAMTNSSEHGDVEGVLRTGSGNVDAESGGGGGGGDVGANGRDSSYQRYDIQHAARWIEQV 147

Query: 507  LPFSLLLLVVFIRQHLQGFFVTIWVAAVMFKSNDILRKQTALKGERKMSVLAGIAVVFLF 686
            LPFSLLLLVVFIRQHLQGFFVTIW+AAV+FKSNDILRKQTALKGERKM VL GI+V F  
Sbjct: 148  LPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKMPVLIGISVAFTL 207

Query: 687  HVIGVYWWYRNDDLLYPLVMLPPKAIPPFWHAIFTIMVNDTMVRQAAMILKCILLMYYKN 866
            HV+ VYWWY+NDDL+YPLVMLPPK IPPFWHAIF IMVNDT+ RQAAM++KCILLMYYKN
Sbjct: 208  HVVSVYWWYQNDDLMYPLVMLPPKEIPPFWHAIFIIMVNDTLARQAAMVVKCILLMYYKN 267

Query: 867  SRGRNYRKQGQMLTLVEYMLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTS 1046
            SRGRNYRKQGQMLTLVEY+LLLYRALLP PVWYRFFLNKEYGSLFSSL TGLYLTFKLTS
Sbjct: 268  SRGRNYRKQGQMLTLVEYLLLLYRALLPAPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTS 327

Query: 1047 VVEKVQSFFTALKALSHKEVHYGSYATSDQVNAAGDLCAICQEKMHAPILLRCKHIFCED 1226
            VVEKVQSFF A+KALS KEVHYG++ATS+QV AAGDLCAICQEKMHAPILLRCKHIFCED
Sbjct: 328  VVEKVQSFFAAVKALSRKEVHYGAHATSEQVIAAGDLCAICQEKMHAPILLRCKHIFCED 387

Query: 1227 CVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1343
            CVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF
Sbjct: 388  CVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 426


>ref|XP_003552333.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 440

 Score =  568 bits (1463), Expect = e-159
 Identities = 270/298 (90%), Positives = 285/298 (95%)
 Frame = +3

Query: 450  DSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFKSNDILRKQTA 629
            DSSYQRYDIQ  ARWIEQ+LPFSLLLLVVFIRQHLQGFFVTIW+AAV+FKSNDILRKQTA
Sbjct: 143  DSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTA 202

Query: 630  LKGERKMSVLAGIAVVFLFHVIGVYWWYRNDDLLYPLVMLPPKAIPPFWHAIFTIMVNDT 809
            LKGERKM VL GI+V F  HV+GVYWWY+NDDL+YPL+MLPPK IPPFWHAIF IMVNDT
Sbjct: 203  LKGERKMLVLVGISVGFALHVVGVYWWYQNDDLMYPLIMLPPKDIPPFWHAIFIIMVNDT 262

Query: 810  MVRQAAMILKCILLMYYKNSRGRNYRKQGQMLTLVEYMLLLYRALLPTPVWYRFFLNKEY 989
            +VRQAAM+ KCILLMYYKNSRGRNYRKQGQMLTLVEY+LLLYRALLPTPVWYRFFLNKEY
Sbjct: 263  LVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEY 322

Query: 990  GSLFSSLTTGLYLTFKLTSVVEKVQSFFTALKALSHKEVHYGSYATSDQVNAAGDLCAIC 1169
            GSLFSSL TGLYLTFKLTSVVEKVQSFF A+KALS KE+HYG+YATS+QVNAAGDLCAIC
Sbjct: 323  GSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEMHYGAYATSEQVNAAGDLCAIC 382

Query: 1170 QEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1343
            QEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF
Sbjct: 383  QEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 440