BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005106
         (4416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   380   e-112
ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus co...   356   e-105
gb|ABV80238.2| required to maintain repression 1 [Zea mays] gi|4...   347   e-103
ref|XP_002439747.1| hypothetical protein SORBIDRAFT_09g019410 [S...   345   e-102
gb|ABV80240.2| mutant required to maintain repression 1 [Zea mays]    346   e-102

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  380 bits (975), Expect(2) = e-112
 Identities = 194/352 (55%), Positives = 253/352 (71%), Gaps = 14/352 (3%)
 Frame = +3

Query: 3402 SMWEDLHFDDASGDSQVSSDPG---KGTVWNIFPRIRESMYHHQQEGFEFLWKNIAGGLN 3572
            S++++L F      SQ  SD G   +GTVW+I P IR SMY HQ EGFEF+WKN+AGG+ 
Sbjct: 448  SIFDELQFQKPGCGSQSGSDHGLHPEGTVWDIIPGIRNSMYRHQCEGFEFIWKNVAGGIY 507

Query: 3573 IENLRNSPPPDHIGGCVISHAPGTGKTFLTIAFLRSYMEIFKESRAVIMAPASMLLTWEE 3752
            ++ L+ S   D   GC+ISHAPGTGKT LTI FL++YME++   R VI+AP +MLLTWEE
Sbjct: 508  LDELKRSSFSDGGSGCIISHAPGTGKTRLTIVFLQTYMELYPACRPVIIAPRTMLLTWEE 567

Query: 3753 EFKKWKIDIPFHNLNSWDFTGREDRMA---HKLIQGKNRNNKWTRLVKLLSWSKEKSVLG 3923
            EFKKW +DIPFHNLN  +++G+E+  A    + I  + ++ K  R+VKL SW K++S+LG
Sbjct: 568  EFKKWNVDIPFHNLNKLEYSGKENITALNFLRRISHQGQSAKSIRMVKLYSWKKDRSILG 627

Query: 3924 ISYNLFEKHAGDRF--------VKGRNKEKVEMRRILLEKPGLLVFDEGHTPRNKHSLIW 4079
            ISY LFEK AG+R         VK ++  KV++R+ILLE PGLLV DEGHTPRN+ SLIW
Sbjct: 628  ISYTLFEKLAGERVLADQENKKVKVQDYTKVQVRKILLELPGLLVLDEGHTPRNEQSLIW 687

Query: 4080 KALGNVKTDKRIILSGTPFQNNFDELYNTLCLVRPKFAEKFFPNTPNIRQAKSDLRSQDA 4259
            KAL  + T++RIILSGTPFQNNF ELYNTLCLVRPKFA++         + K   +S  A
Sbjct: 688  KALSKIDTERRIILSGTPFQNNFKELYNTLCLVRPKFADRIAVEQYGGFRGKRGRKSNAA 747

Query: 4260 RRLWASLTNSIGKDDDQSLLDPLRSLIDPFVHVHRGSILKENLPGLRDRVIV 4415
            R  W  LT+SIGK  D   ++ LR++I+PFVH+H+G+IL+ENLPGL+D V+V
Sbjct: 748  RGKWDLLTSSIGKIADDK-VEELRAMIEPFVHIHKGTILQENLPGLKDSVVV 798



 Score = 56.2 bits (134), Expect(2) = e-112
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = +2

Query: 3188 EDADESSVELDPSTTCCYGKQGKHDFVIDDEVGIKCRFCSFVHLEMKYVLP 3340
            ED   + VE+D +  C    QG H  V+D+++G+ C FCSFV LE+KY+LP
Sbjct: 379  EDFGSAEVEIDQAVLC---HQGNHQLVLDEQIGMTCCFCSFVQLEIKYILP 426


>ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus communis]
            gi|223543519|gb|EEF45050.1| ATP-dependent helicase,
            putative [Ricinus communis]
          Length = 1138

 Score =  356 bits (913), Expect(2) = e-105
 Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 10/349 (2%)
 Frame = +3

Query: 3399 LSMWEDLHFDDASGDSQVSSDP---GKGTVWNIFPRIRESMYHHQQEGFEFLWKNIAGGL 3569
            L ++E+LH  D+  DS+   D     +GTVW I P I   ++ HQ+EGFEFLWKNIAGG+
Sbjct: 513  LDIFEELHIQDSDDDSKHGYDSCTHAQGTVWGIIPGIGRDLHEHQREGFEFLWKNIAGGI 572

Query: 3570 NIENLRNSPPPDHIGGCVISHAPGTGKTFLTIAFLRSYMEIFKESRAVIMAPASMLLTWE 3749
             ++ L+     D   GC+ISHAPGTGKT L I FL+SYM+++ E R +I+ P+++LL+WE
Sbjct: 573  YLDKLKERTRFDGGSGCIISHAPGTGKTRLAIVFLQSYMKLYPECRPLIITPSTLLLSWE 632

Query: 3750 EEFKKWKIDIPFHNLNSWDFTGREDRMAHKLIQGKNRNNKWTRLVKLLSWSKEKSVLGIS 3929
             EFKKWK DIPFHNLN+  F GRE+  A +LI+    +    R+VKL SW K+KSVLGIS
Sbjct: 633  AEFKKWKFDIPFHNLNTQKFCGRENAAALRLIKSGQHSINSVRMVKLYSWKKDKSVLGIS 692

Query: 3930 YNLFEKHAGDRFVKGRNKEKVE--MRRILLEKPGLLVFDEGHTPRNKHSLIWKALGNVKT 4103
            Y LFE+   +   + + ++K E  MR  LL+ PGLLV DEGHTPRN +SL++KAL  ++T
Sbjct: 693  YKLFEELVREDKKRSKTQQKSEDDMRNALLQLPGLLVLDEGHTPRNDNSLVFKALSRIRT 752

Query: 4104 DKRIILSGTPFQNNFDELYNTLCLVRPKFAEKFFPN-TPNIRQAKSDLRSQDARRLWASL 4280
            DKRIILSGTPFQNNF EL+NTL LVRPKFA+    N   +  + +   ++  AR  WASL
Sbjct: 753  DKRIILSGTPFQNNFTELFNTLLLVRPKFADSLLYNCNESFGKKRRGRKTNGARGTWASL 812

Query: 4281 TNSIGKDDDQSL----LDPLRSLIDPFVHVHRGSILKENLPGLRDRVIV 4415
            T SI KD +       L+ +R++I PFVHV+RG+IL++ LPGLRD +++
Sbjct: 813  TGSIAKDGNDRFKAEKLEEVRAMIKPFVHVYRGNILQQRLPGLRDAMVI 861



 Score = 57.4 bits (137), Expect(2) = e-105
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +2

Query: 3209 VELDPSTTCCYGKQGKHDFVIDDEVGIKCRFCSFVHLEMKYVLPP 3343
            VELD +  C    +G H F++D+E+GIKCRFCSFV LE+KY   P
Sbjct: 453  VELDTAALC---HRGNHQFILDEEIGIKCRFCSFVDLEIKYYTAP 494


>gb|ABV80238.2| required to maintain repression 1 [Zea mays]
            gi|413945245|gb|AFW77894.1| required to maintain
            repression1 [Zea mays]
          Length = 1435

 Score =  347 bits (889), Expect(2) = e-103
 Identities = 173/348 (49%), Positives = 241/348 (69%), Gaps = 7/348 (2%)
 Frame = +3

Query: 3393 KDLSMWEDLHFDDASGDSQVSSDPGK-GTVWNIFPRIRESMYHHQQEGFEFLWKNIAGGL 3569
            K+  M+ DL ++    D++ S D  + GTVWN+ P +  +MY HQ+E FEF+W N+ G +
Sbjct: 809  KNTLMFHDL-YEQGVNDTEQSQDIHQYGTVWNLIPGVISTMYEHQREAFEFMWTNLVGDI 867

Query: 3570 NIENLRNSPPPDHIGGCVISHAPGTGKTFLTIAFLRSYMEIFKESRAVIMAPASMLLTWE 3749
             ++ +++   PD +GGCVI HAPGTGKT L I F+++YM++F + R VI+AP  ML  W+
Sbjct: 868  RLDEIKHGAKPDVVGGCVICHAPGTGKTRLAIVFIQTYMKVFPDCRPVIIAPRGMLFAWD 927

Query: 3750 EEFKKWKIDIPFHNLNSWDFTGREDRMAHKLIQGKNRNNKWTRLVKLLSWSKEKSVLGIS 3929
            EEFKKW +D+PFH LN+ D+TG+EDR   KLI+ ++R  K TRLVKLLSW+K   +LGIS
Sbjct: 928  EEFKKWNVDVPFHILNTTDYTGKEDREICKLIKKEHRTEKLTRLVKLLSWNKGHGILGIS 987

Query: 3930 YNLFEKHAGDRFVKGRNKEKVEMRRILLEKPGLLVFDEGHTPRNKHSLIWKALGNVKTDK 4109
            Y L+ K   +   K    E+ ++R ILL+ PGLLV DEGHTPRN+ S++WK LGNVKT+K
Sbjct: 988  YGLYTKLTSE---KPGCTEENKVRSILLDNPGLLVLDEGHTPRNERSVMWKTLGNVKTEK 1044

Query: 4110 RIILSGTPFQNNFDELYNTLCLVRPKFAEKFFPNTPNIRQAKSDLRSQD------ARRLW 4271
            RIILSGTPFQNNF ELYN LCLVRP+F E F   +   R+     + +D       + +W
Sbjct: 1045 RIILSGTPFQNNFLELYNILCLVRPRFGEMFLTKSRVGRRHYVSKKQKDKFSDKYEKGVW 1104

Query: 4272 ASLTNSIGKDDDQSLLDPLRSLIDPFVHVHRGSILKENLPGLRDRVIV 4415
            ASLT+++  D+     + +RS++ PFVH+H G+IL+  LPGLR+ VI+
Sbjct: 1105 ASLTSNVTDDN----AEKVRSILKPFVHIHNGNILR-TLPGLRESVII 1147



 Score = 59.7 bits (143), Expect(2) = e-103
 Identities = 24/58 (41%), Positives = 42/58 (72%)
 Frame = +2

Query: 3182 DTEDADESSVELDPSTTCCYGKQGKHDFVIDDEVGIKCRFCSFVHLEMKYVLPPLLTV 3355
            + ++ ++    L P T C    +GKH+FVIDD++GI+C++CS V+LE+K++ P L++V
Sbjct: 741  ECQEGNQLDFSLAPVTPC---SRGKHEFVIDDQIGIRCKYCSLVNLEIKFMFPSLVSV 795


>ref|XP_002439747.1| hypothetical protein SORBIDRAFT_09g019410 [Sorghum bicolor]
            gi|241945032|gb|EES18177.1| hypothetical protein
            SORBIDRAFT_09g019410 [Sorghum bicolor]
          Length = 1535

 Score =  345 bits (886), Expect(2) = e-102
 Identities = 172/352 (48%), Positives = 238/352 (67%), Gaps = 6/352 (1%)
 Frame = +3

Query: 3378 NSAD*KDLSMWEDLHFDDASGDSQVSSDPGKGTVWNIFPRIRESMYHHQQEGFEFLWKNI 3557
            N+   KD  M+ DL+    S   Q+S     GTVW++   +  +MY HQ+E FEF+W N+
Sbjct: 904  NAKGVKDTLMFHDLYEQTGSDIEQISDLHQYGTVWDLISGVISTMYEHQREAFEFMWTNL 963

Query: 3558 AGGLNIENLRNSPPPDHIGGCVISHAPGTGKTFLTIAFLRSYMEIFKESRAVIMAPASML 3737
             GG+ ++ L++   PD +GGCVI HAPGTGKT L I F+++YM++F + R VI+AP  ML
Sbjct: 964  VGGIRLDELKHGAKPDVVGGCVICHAPGTGKTRLAIVFIQTYMKVFPDCRPVIIAPRGML 1023

Query: 3738 LTWEEEFKKWKIDIPFHNLNSWDFTGREDRMAHKLIQGKNRNNKWTRLVKLLSWSKEKSV 3917
              W+EEFKKW +D+PFH +N+ D+TG+EDR   KLI+ ++R  K TRLVKLLSW+K   +
Sbjct: 1024 FAWDEEFKKWNVDVPFHIMNTTDYTGKEDREICKLIKKEHRTEKLTRLVKLLSWNKGHGI 1083

Query: 3918 LGISYNLFEKHAGDRFVKGRNKEKVEMRRILLEKPGLLVFDEGHTPRNKHSLIWKALGNV 4097
            LGISY L+ K   +   K    E+ ++R ILL+ PGLLV DEGHTPRN+ S++WK LG +
Sbjct: 1084 LGISYGLYTKLTSE---KPGCTEENKVRSILLDNPGLLVLDEGHTPRNERSIMWKTLGKL 1140

Query: 4098 KTDKRIILSGTPFQNNFDELYNTLCLVRPKFAEKFFPNTPNIRQAKSDLRSQD------A 4259
            KT+KRIILSGTPFQNNF ELYN LCLVRP+F E F       R+     + +D       
Sbjct: 1141 KTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLTKGRVGRRHYVSKKQKDKFSDKYE 1200

Query: 4260 RRLWASLTNSIGKDDDQSLLDPLRSLIDPFVHVHRGSILKENLPGLRDRVIV 4415
            + +WASLT+++  D+     + +RS++ PFVH+H G+IL+  LPGLR+ VI+
Sbjct: 1201 KGVWASLTSNVTDDN----AEKVRSILKPFVHIHNGNILR-TLPGLRESVII 1247



 Score = 58.2 bits (139), Expect(2) = e-102
 Identities = 23/55 (41%), Positives = 39/55 (70%)
 Frame = +2

Query: 3188 EDADESSVELDPSTTCCYGKQGKHDFVIDDEVGIKCRFCSFVHLEMKYVLPPLLT 3352
            E+ ++    L P T C    +GKH+F+IDD +GI+C++CS V+LE+K++ P L++
Sbjct: 843  EEGNQLDFSLAPVTPC---SRGKHEFIIDDRIGIRCKYCSLVNLEIKFMFPSLIS 894


>gb|ABV80240.2| mutant required to maintain repression 1 [Zea mays]
          Length = 1435

 Score =  346 bits (888), Expect(2) = e-102
 Identities = 173/348 (49%), Positives = 241/348 (69%), Gaps = 7/348 (2%)
 Frame = +3

Query: 3393 KDLSMWEDLHFDDASGDSQVSSDPGK-GTVWNIFPRIRESMYHHQQEGFEFLWKNIAGGL 3569
            K+  M+ DL ++    D++ S D  + GTVWN+ P +  +MY HQ+E FEF+W N+ G +
Sbjct: 809  KNTLMFHDL-YEQGVNDTEQSQDIHQYGTVWNLIPGVISTMYEHQREAFEFMWTNLVGDI 867

Query: 3570 NIENLRNSPPPDHIGGCVISHAPGTGKTFLTIAFLRSYMEIFKESRAVIMAPASMLLTWE 3749
             ++ +++   PD +GGCVI HAPGTGKT L I F+++YM++F + R VI+AP  ML  W+
Sbjct: 868  RLDEIKHGAKPDVVGGCVICHAPGTGKTRLAIVFIQTYMKVFPDCRPVIIAPRGMLFAWD 927

Query: 3750 EEFKKWKIDIPFHNLNSWDFTGREDRMAHKLIQGKNRNNKWTRLVKLLSWSKEKSVLGIS 3929
            EEFKKW +D+PFH LN+ D+TG+EDR   KLI+ ++R  K TRLVKLLSW+K   +LGIS
Sbjct: 928  EEFKKWNVDVPFHILNTTDYTGKEDRDICKLIKKEHRTEKLTRLVKLLSWNKGHGILGIS 987

Query: 3930 YNLFEKHAGDRFVKGRNKEKVEMRRILLEKPGLLVFDEGHTPRNKHSLIWKALGNVKTDK 4109
            Y L+ K   +   K    E+ ++R ILL+ PGLLV DEGHTPRN+ S++WK LGNVKT+K
Sbjct: 988  YGLYTKLTSE---KPGCTEENKVRSILLDNPGLLVLDEGHTPRNERSVMWKTLGNVKTEK 1044

Query: 4110 RIILSGTPFQNNFDELYNTLCLVRPKFAEKFFPNTPNIRQAKSDLRSQD------ARRLW 4271
            RIILSGTPFQNNF ELYN LCLVRP+F E F   +   R+     + +D       + +W
Sbjct: 1045 RIILSGTPFQNNFLELYNILCLVRPRFGEMFLTKSRVGRRHYVSKKQKDKFSDKYEKGVW 1104

Query: 4272 ASLTNSIGKDDDQSLLDPLRSLIDPFVHVHRGSILKENLPGLRDRVIV 4415
            ASLT+++  D+     + +RS++ PFVH+H G+IL+  LPGLR+ VI+
Sbjct: 1105 ASLTSNVTDDN----AEKVRSILKPFVHIHNGNILR-TLPGLRESVII 1147



 Score = 56.6 bits (135), Expect(2) = e-102
 Identities = 23/58 (39%), Positives = 41/58 (70%)
 Frame = +2

Query: 3182 DTEDADESSVELDPSTTCCYGKQGKHDFVIDDEVGIKCRFCSFVHLEMKYVLPPLLTV 3355
            + ++ ++    L   T C    +GKH+FVIDD++GI+C++CS V+LE+K++ P L++V
Sbjct: 741  ECQEGNQLDFSLASVTPC---SRGKHEFVIDDQIGIRCKYCSLVNLEIKFMFPSLVSV 795