BLASTX nr result

ID: Coptis23_contig00005086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005086
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83625.1| hypothetical protein VITISV_041718 [Vitis vinife...   355   4e-96
ref|XP_002269576.2| PREDICTED: uncharacterized protein LOC100263...   350   2e-94
gb|ADF45668.1| nucleoside diphosphate kinase 1 [Solanum tuberosum]    349   3e-94
gb|ACV60545.1| nucleoside diphosphate kinase [Solanum tuberosum]      347   1e-93
ref|XP_002509969.1| nucleoside diphosphate kinase, putative [Ric...   347   2e-93

>emb|CAN83625.1| hypothetical protein VITISV_041718 [Vitis vinifera]
           gi|297742339|emb|CBI34488.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  355 bits (912), Expect = 4e-96
 Identities = 178/232 (76%), Positives = 197/232 (84%)
 Frame = -3

Query: 698 MRSQIYRSVSNSLRSFIYASKSSPLCAEGRXXXXXXXTSFRGKAPAVVSFYGRTESRNVP 519
           M SQI RS S + RS + ASKSS L AEGR        S RGK    +S +G   S N  
Sbjct: 1   MSSQICRSASRAARSLLSASKSSNLLAEGRAVAAVAALSSRGKP--FLSSFGNAGSGNAY 58

Query: 518 NGWLSGLLALPAAVYMLQEQDVYAAEMERTFIAIKPDGVQRGLIAEIMSRFERKGFKLVA 339
            GWLS +LALPAA YM+QEQ+++A EMERTFIAIKPDGVQRGLIAEI+SRFERKGFKLVA
Sbjct: 59  RGWLSSVLALPAAAYMMQEQELHATEMERTFIAIKPDGVQRGLIAEILSRFERKGFKLVA 118

Query: 338 VKLVVPNKEFAEKHYHDLKERPFFSGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQ 159
           +K+VVP+K+FA+KHYHDLKERPFF+GLCDFLSSGPV+AMVWEGEGVIKYGRKLIGATDPQ
Sbjct: 119 IKIVVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQ 178

Query: 158 KSEPGTIRGDLAVVVGRNIIHGSDGPETAKEEINLWFKPEELVTYQSNSEKW 3
           KSEPGTIRGDLAVVVGRNIIHGSDGPETAK+EINLWFKPEELV Y SN+EKW
Sbjct: 179 KSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVNYSSNAEKW 230


>ref|XP_002269576.2| PREDICTED: uncharacterized protein LOC100263310 [Vitis vinifera]
          Length = 521

 Score =  350 bits (897), Expect = 2e-94
 Identities = 174/226 (76%), Positives = 193/226 (85%)
 Frame = -3

Query: 680 RSVSNSLRSFIYASKSSPLCAEGRXXXXXXXTSFRGKAPAVVSFYGRTESRNVPNGWLSG 501
           RS S + RS + ASKSS L AEGR        S RGK    +S +G   S N   GWLS 
Sbjct: 293 RSASRAARSLLSASKSSNLLAEGRAVAAVAALSSRGKP--FLSSFGNAGSGNAYRGWLSS 350

Query: 500 LLALPAAVYMLQEQDVYAAEMERTFIAIKPDGVQRGLIAEIMSRFERKGFKLVAVKLVVP 321
           +LALPAA YM+QEQ+++A EMERTFIAIKPDGVQRGLIAEI+SRFERKGFKLVA+K+VVP
Sbjct: 351 VLALPAAAYMMQEQELHATEMERTFIAIKPDGVQRGLIAEILSRFERKGFKLVAIKIVVP 410

Query: 320 NKEFAEKHYHDLKERPFFSGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGT 141
           +K+FA+KHYHDLKERPFF+GLCDFLSSGPV+AMVWEGEGVIKYGRKLIGATDPQKSEPGT
Sbjct: 411 SKDFAQKHYHDLKERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGT 470

Query: 140 IRGDLAVVVGRNIIHGSDGPETAKEEINLWFKPEELVTYQSNSEKW 3
           IRGDLAVVVGRNIIHGSDGPETAK+EINLWFKPEELV Y SN+EKW
Sbjct: 471 IRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVNYSSNAEKW 516


>gb|ADF45668.1| nucleoside diphosphate kinase 1 [Solanum tuberosum]
          Length = 238

 Score =  349 bits (896), Expect = 3e-94
 Identities = 175/234 (74%), Positives = 198/234 (84%), Gaps = 2/234 (0%)
 Frame = -3

Query: 698 MRSQIYRSVSNSLRSFIYAS--KSSPLCAEGRXXXXXXXTSFRGKAPAVVSFYGRTESRN 525
           M SQI RS S + +S + AS  ++S   + GR        S RG  P++ S YGR+ES N
Sbjct: 1   MNSQICRSASRAAKSLLSASSKQTSRAFSGGRAAAAAATVSLRGVVPSLAS-YGRSESGN 59

Query: 524 VPNGWLSGLLALPAAVYMLQEQDVYAAEMERTFIAIKPDGVQRGLIAEIMSRFERKGFKL 345
               W+SG+LALPAA YMLQEQ+ +AAEMERTFIAIKPDGVQRGLI+EI+SRFERKGFKL
Sbjct: 60  ASRAWISGVLALPAAAYMLQEQEAHAAEMERTFIAIKPDGVQRGLISEIVSRFERKGFKL 119

Query: 344 VAVKLVVPNKEFAEKHYHDLKERPFFSGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATD 165
           VA+K+V+P+KEFA+KHYHDL ERPFF+GLCDFLSSGPVLAMVWEGEGVI+YGRKLIGATD
Sbjct: 120 VAIKVVIPSKEFAKKHYHDLSERPFFNGLCDFLSSGPVLAMVWEGEGVIRYGRKLIGATD 179

Query: 164 PQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKEEINLWFKPEELVTYQSNSEKW 3
           PQKSEPGTIRGDLAVVVGRNIIHGSDGPETAK+EINLWFKPEELV Y SNSEKW
Sbjct: 180 PQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVKYTSNSEKW 233


>gb|ACV60545.1| nucleoside diphosphate kinase [Solanum tuberosum]
          Length = 238

 Score =  347 bits (891), Expect = 1e-93
 Identities = 174/234 (74%), Positives = 197/234 (84%), Gaps = 2/234 (0%)
 Frame = -3

Query: 698 MRSQIYRSVSNSLRSFIYAS--KSSPLCAEGRXXXXXXXTSFRGKAPAVVSFYGRTESRN 525
           M SQI RS S + +S + AS  ++S   + GR          RG  P++ S YGR+ES N
Sbjct: 1   MNSQICRSASRAAKSLLSASSKQTSRAFSGGRAAAAAATVCLRGVVPSLAS-YGRSESGN 59

Query: 524 VPNGWLSGLLALPAAVYMLQEQDVYAAEMERTFIAIKPDGVQRGLIAEIMSRFERKGFKL 345
               W+SG+LALPAA YMLQEQ+ +AAEMERTFIAIKPDGVQRGLI+EI+SRFERKGFKL
Sbjct: 60  ASRAWISGVLALPAAAYMLQEQEAHAAEMERTFIAIKPDGVQRGLISEIVSRFERKGFKL 119

Query: 344 VAVKLVVPNKEFAEKHYHDLKERPFFSGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATD 165
           VA+K+V+P+KEFA+KHYHDL ERPFF+GLCDFLSSGPVLAMVWEGEGVI+YGRKLIGATD
Sbjct: 120 VAIKVVIPSKEFAKKHYHDLSERPFFNGLCDFLSSGPVLAMVWEGEGVIRYGRKLIGATD 179

Query: 164 PQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKEEINLWFKPEELVTYQSNSEKW 3
           PQKSEPGTIRGDLAVVVGRNIIHGSDGPETAK+EINLWFKPEELV Y SNSEKW
Sbjct: 180 PQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVKYTSNSEKW 233


>ref|XP_002509969.1| nucleoside diphosphate kinase, putative [Ricinus communis]
           gi|223549868|gb|EEF51356.1| nucleoside diphosphate
           kinase, putative [Ricinus communis]
          Length = 236

 Score =  347 bits (890), Expect = 2e-93
 Identities = 174/232 (75%), Positives = 194/232 (83%)
 Frame = -3

Query: 698 MRSQIYRSVSNSLRSFIYASKSSPLCAEGRXXXXXXXTSFRGKAPAVVSFYGRTESRNVP 519
           M SQI RS S + RS + ASK+S  C            S  GKA  + S + +T S  V 
Sbjct: 1   MSSQIIRSASRAARSLLSASKTSS-CFYSEGRAVAAAVSLSGKASFLASAFRKTGSSTVS 59

Query: 518 NGWLSGLLALPAAVYMLQEQDVYAAEMERTFIAIKPDGVQRGLIAEIMSRFERKGFKLVA 339
             W+SG LA+PAAVYMLQEQ+ +AAEMERTFIAIKPDGVQRGLIAEI++RFERKGFKLV 
Sbjct: 60  AQWISGALAIPAAVYMLQEQEAHAAEMERTFIAIKPDGVQRGLIAEIVARFERKGFKLVG 119

Query: 338 VKLVVPNKEFAEKHYHDLKERPFFSGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQ 159
           +K+VVP+KEFA+KHYHDLKERPFFSGLCDFLSSGPV+AMVWEGEGVIKYGRKLIGATDPQ
Sbjct: 120 IKVVVPSKEFAQKHYHDLKERPFFSGLCDFLSSGPVIAMVWEGEGVIKYGRKLIGATDPQ 179

Query: 158 KSEPGTIRGDLAVVVGRNIIHGSDGPETAKEEINLWFKPEELVTYQSNSEKW 3
           KSEPGTIRGDLAVVVGRNIIHGSDGPETAK+EINLWFKPEELV+Y SN+EKW
Sbjct: 180 KSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVSYASNAEKW 231


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