BLASTX nr result

ID: Coptis23_contig00005082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005082
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indi...   342   9e-92
ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group] g...   340   5e-91
ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloro...   328   2e-87
gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hy...   327   2e-87
ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [S...   321   2e-85

>gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indica Group]
          Length = 342

 Score =  342 bits (877), Expect = 9e-92
 Identities = 163/197 (82%), Positives = 179/197 (90%)
 Frame = +1

Query: 1   VVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFGPESGKDGWTGLP 180
           VVR+IP  KL+P T+ ADVLSVKQFPRNL LE+LPPGFGIVCTHPMFGPESGK GW+GLP
Sbjct: 145 VVRAIPFRKLRPGTLVADVLSVKQFPRNLLLEILPPGFGIVCTHPMFGPESGKHGWSGLP 204

Query: 181 FVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQFITHTIGRILSH 360
           FVYDKVRV +   Q  KC+QFL IFE EGCRMVEM CEEHDR+AAGSQFITHTIGRILS 
Sbjct: 205 FVYDKVRVAKEGDQAAKCEQFLSIFEREGCRMVEMLCEEHDRYAAGSQFITHTIGRILSQ 264

Query: 361 LNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENLDRAFETVKQKLF 540
           LNLESTPINTKGYETLLQLT+NT+SDSFDLYYGLFMYNVNAT+QI+NLDRAFE VKQ L+
Sbjct: 265 LNLESTPINTKGYETLLQLTKNTISDSFDLYYGLFMYNVNATEQIDNLDRAFEKVKQMLY 324

Query: 541 GRLHDILRKQIVERVPL 591
           GRLH++LRKQIVERVP+
Sbjct: 325 GRLHNVLRKQIVERVPI 341


>ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group]
           gi|53793078|dbj|BAD54288.1| putative arogenate
           dehydrogenase isoform 2 [Oryza sativa Japonica Group]
           gi|113595847|dbj|BAF19721.1| Os06g0542200 [Oryza sativa
           Japonica Group] gi|215765048|dbj|BAG86745.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222635711|gb|EEE65843.1| hypothetical protein
           OsJ_21611 [Oryza sativa Japonica Group]
          Length = 342

 Score =  340 bits (871), Expect = 5e-91
 Identities = 162/197 (82%), Positives = 178/197 (90%)
 Frame = +1

Query: 1   VVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFGPESGKDGWTGLP 180
           VVR+IP  KL+P T+ ADVLSVKQFPRNL LE+LPPGFGIVCTHPMFGPESGK GW+GLP
Sbjct: 145 VVRAIPFRKLRPGTLVADVLSVKQFPRNLLLEILPPGFGIVCTHPMFGPESGKHGWSGLP 204

Query: 181 FVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQFITHTIGRILSH 360
           FVYDKVRV +   Q  KC+QFL IFE EGCRMVEM CEEHDR+AAGSQFITHTIGRILS 
Sbjct: 205 FVYDKVRVAKEGDQAAKCEQFLSIFEREGCRMVEMLCEEHDRYAAGSQFITHTIGRILSQ 264

Query: 361 LNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENLDRAFETVKQKLF 540
           LNLESTPINTKGYETLLQLT+NT+SDSFDLYYGLFMYNVNAT+QI+NLDRAFE VKQ L+
Sbjct: 265 LNLESTPINTKGYETLLQLTKNTISDSFDLYYGLFMYNVNATEQIDNLDRAFEKVKQMLY 324

Query: 541 GRLHDILRKQIVERVPL 591
           GRLH++LRKQI ERVP+
Sbjct: 325 GRLHNVLRKQIEERVPI 341


>ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 361

 Score =  328 bits (840), Expect = 2e-87
 Identities = 158/197 (80%), Positives = 172/197 (87%)
 Frame = +1

Query: 1   VVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFGPESGKDGWTGLP 180
           VVR+IP HKL+ DTI ADVLSVKQFPRNL LE+LPP FGIVCTHPMFGPESGK GW+ LP
Sbjct: 165 VVRAIPFHKLRSDTIVADVLSVKQFPRNLLLEILPPEFGIVCTHPMFGPESGKHGWSTLP 224

Query: 181 FVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQFITHTIGRILSH 360
           FVYDKVR+     Q   C QFL IFE EGCRMVEMSC EHDRHAA SQFITHTIGR+L+ 
Sbjct: 225 FVYDKVRLADKGDQKANCGQFLSIFEGEGCRMVEMSCAEHDRHAAASQFITHTIGRVLAQ 284

Query: 361 LNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENLDRAFETVKQKLF 540
           LNL+STPINTKG+E LL+LTENTVSDSFDLYYGLFMYNVNAT+QIE L+RAFE VKQ L+
Sbjct: 285 LNLKSTPINTKGFEALLKLTENTVSDSFDLYYGLFMYNVNATEQIEKLERAFEKVKQMLY 344

Query: 541 GRLHDILRKQIVERVPL 591
           GRLHDILRKQIVERVP+
Sbjct: 345 GRLHDILRKQIVERVPI 361


>gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hypothetical protein
           ZEAMMB73_026457 [Zea mays]
          Length = 392

 Score =  327 bits (839), Expect = 2e-87
 Identities = 159/221 (71%), Positives = 178/221 (80%)
 Frame = +1

Query: 1   VVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFGPESGKDGWTGLP 180
           VVR+IP HKL+PDTI ADVLSVK+FPRNL LEVLPPGFGI+CTHPMFGPESGK GW  LP
Sbjct: 157 VVRAIPFHKLRPDTIVADVLSVKEFPRNLLLEVLPPGFGIICTHPMFGPESGKHGWGKLP 216

Query: 181 FVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQFITHTIGRILSH 360
           FV+DKVRV  +  Q   CD+FL IFE EGCRMVEMSC EHDR+AAGSQFITHTIGR+LS 
Sbjct: 217 FVFDKVRVADDGDQAATCDRFLSIFEQEGCRMVEMSCAEHDRYAAGSQFITHTIGRVLSQ 276

Query: 361 LNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENLDRAFETVKQKLF 540
           LNL STPINTKGYETLLQLT+NTVSDSFDLYYGLFMYN+NAT+Q++ L+ AFE V+Q L 
Sbjct: 277 LNLSSTPINTKGYETLLQLTQNTVSDSFDLYYGLFMYNINATEQLDRLEMAFEKVRQMLS 336

Query: 541 GRLHDILRKQIVERVPLQGSPPRTKESHPAPLFLPNAEKMN 663
           GRLHD +RKQIVER    G     + S PA   L    + N
Sbjct: 337 GRLHDFIRKQIVERADPSGKLANGRSSSPAAHHLSTLTEEN 377


>ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [Sorghum bicolor]
           gi|241915340|gb|EER88484.1| hypothetical protein
           SORBIDRAFT_10g021300 [Sorghum bicolor]
          Length = 382

 Score =  321 bits (823), Expect = 2e-85
 Identities = 156/205 (76%), Positives = 174/205 (84%)
 Frame = +1

Query: 1   VVRSIPMHKLKPDTIFADVLSVKQFPRNLFLEVLPPGFGIVCTHPMFGPESGKDGWTGLP 180
           VVR+IP  KL+ DTI ADVLSVK+FPRNL LEVLPPGFGI+CTHPMFGPESGK GW  LP
Sbjct: 164 VVRAIPFRKLRHDTIVADVLSVKEFPRNLLLEVLPPGFGIICTHPMFGPESGKHGWGKLP 223

Query: 181 FVYDKVRVDQNSAQYQKCDQFLGIFETEGCRMVEMSCEEHDRHAAGSQFITHTIGRILSH 360
           FV+DKVRV ++  Q  KCDQFL IFE EGCRMVEMSC EHDR+AAGSQFITHTIGR+LS 
Sbjct: 224 FVFDKVRVAEDGDQAAKCDQFLSIFEQEGCRMVEMSCAEHDRYAAGSQFITHTIGRVLSQ 283

Query: 361 LNLESTPINTKGYETLLQLTENTVSDSFDLYYGLFMYNVNATDQIENLDRAFETVKQKLF 540
           LNL+STPINTKGYETLLQLT+NTVSDSFDLYYGLFMYNVNAT+Q++ L+ AFE V+Q L 
Sbjct: 284 LNLKSTPINTKGYETLLQLTKNTVSDSFDLYYGLFMYNVNATEQLDKLEMAFEKVRQMLS 343

Query: 541 GRLHDILRKQIVERVPLQGSPPRTK 615
           GRLHD +RKQIVER     + P  K
Sbjct: 344 GRLHDFIRKQIVERAAHVPADPSGK 368


Top