BLASTX nr result

ID: Coptis23_contig00005076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005076
         (2131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273614.1| PREDICTED: uncharacterized protein LOC100257...   412   e-169
ref|XP_002268279.1| PREDICTED: uncharacterized protein LOC100251...   403   e-165
ref|XP_002521877.1| zinc finger protein, putative [Ricinus commu...   350   e-146
ref|XP_002521878.1| nucleic acid binding protein, putative [Rici...   333   e-145
ref|XP_003555448.1| PREDICTED: zinc finger protein NUTCRACKER-li...   276   e-124

>ref|XP_002273614.1| PREDICTED: uncharacterized protein LOC100257993 [Vitis vinifera]
          Length = 587

 Score =  412 bits (1059), Expect(2) = e-169
 Identities = 236/457 (51%), Positives = 276/457 (60%)
 Frame = -2

Query: 1797 EKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 1618
            EKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA
Sbjct: 144  EKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 203

Query: 1617 RLPTGLGTMGSHLYGGSNMTLALSQVGSQMSSLQDQSHSSNDILRLGGAGQNQYDHLIXX 1438
            R P  L  MG HLYG S MTL LSQVGSQ++SL DQ+H S++ILRL  AG  +Y+HL+  
Sbjct: 204  RNPPSLTNMGGHLYGTSQMTLGLSQVGSQIASLHDQNHPSSNILRLDSAGAAKYEHLLPP 263

Query: 1437 XXXXXXXXXXXXXSAFFLQGPSNQDFHEDSQSHHGLMQNKNFHGLMQLPELQXXXXXXXX 1258
                         S+ F    SNQ + E  QSHH L+ NK FHGLMQ P+ Q        
Sbjct: 264  SNPSFGKPPQPMPSSAFYMPDSNQGYQE-HQSHHTLLGNKPFHGLMQFPDHQ-------G 315

Query: 1257 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLLMPDQFNGGNAGTEGT 1078
                                                     +G L PDQFN GNA  +GT
Sbjct: 316  NANNSPSAAANLFNLGFFPNNSTSSSISNSNNANNSTTLPPSGFLSPDQFNNGNASGQGT 375

Query: 1077 TLFSGNIMGDHMNSNVSSLYNTSVQNDNALPQMSATALLQKAAQMGSTTSANSATLLRGF 898
            TLFS + M DH+ S +SSLY+TS+Q ++  P MSATALLQKAAQMG TTS+NS++LLRG 
Sbjct: 376  TLFSSS-MSDHVGSGLSSLYSTSMQQESLAPHMSATALLQKAAQMGPTTSSNSSSLLRGL 434

Query: 897  GXXXXXSARSDRPQMSANFRGSFTGGSSGENLRSQIENENHLQDLMNSLANGNSPIFXXX 718
            G      A+SDR  +S+NF           +LRSQ+ENENHLQ LMNSLANGNS IF   
Sbjct: 435  GGSSSTGAKSDRQLLSSNF----------SSLRSQMENENHLQGLMNSLANGNSSIF--- 481

Query: 717  XXXXXXXXXXGQETSFTGFNTNRLSLDQQHSNSNLHNMDETKMHQNLTVSIGGSDRLTRD 538
                       QE +F GFN   ++L+QQH N+N   +D+ K+HQ+L VS+GG DRLT D
Sbjct: 482  -----GGSGHAQENNFGGFNGRGITLEQQHKNTNFSKVDDAKLHQSLGVSMGGPDRLTLD 536

Query: 537  FLXXXXXXXXXXXXXSQREQHHGXXXXXXXXXIKSAA 427
            FL             SQREQ H          IK+AA
Sbjct: 537  FLGVGGVVRNVGGGFSQREQRHVVEMSSLDSEIKTAA 573



 Score =  211 bits (537), Expect(2) = e-169
 Identities = 96/100 (96%), Positives = 99/100 (99%)
 Frame = -3

Query: 2129 NLPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK 1950
            NLPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKL+QKTTK
Sbjct: 46   NLPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLRQKTTK 105

Query: 1949 EVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEK 1830
            EV+RKVYLCPEPTCVHHDPSRALGDLTGIKKH+ RKHGEK
Sbjct: 106  EVRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEK 145


>ref|XP_002268279.1| PREDICTED: uncharacterized protein LOC100251079 [Vitis vinifera]
          Length = 603

 Score =  403 bits (1036), Expect(2) = e-165
 Identities = 228/434 (52%), Positives = 268/434 (61%), Gaps = 12/434 (2%)
 Frame = -2

Query: 1797 EKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 1618
            EKKWKC+KCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA
Sbjct: 143  EKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 202

Query: 1617 RLPTGLGTMGSHLYGGSNMTLALSQVGSQMSSLQDQSHSSNDILRLGGAGQNQYDHLI-- 1444
            R PT + T+GSHLYG SNM L LSQVG Q+SS+ DQSH   D+LRLGGA   Q+DHLI  
Sbjct: 203  RHPTPMSTIGSHLYGSSNMGLGLSQVGPQISSMPDQSHQPGDMLRLGGARAGQFDHLIPP 262

Query: 1443 XXXXXXXXXXXXXXXSAFFLQGPSNQDFHEDSQSHH-GLMQNKNFHGLMQLPELQXXXXX 1267
                            AF++  P NQ+FHED QS H GL+ NK FHGL+ LP+LQ     
Sbjct: 263  AIGSSSFRTPQPMPSQAFYIPEP-NQEFHEDQQSQHGGLLTNKPFHGLVHLPDLQ----- 316

Query: 1266 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLLMPDQFN--GGNA 1093
                                                       S+GLL+ DQFN   G +
Sbjct: 317  --NNTNNPSSAANLFNLSFFSNSSNTNSMLSNTNNANNSTNMPSSGLLISDQFNTVNGGS 374

Query: 1092 GTEGTTLFSGNIMGDHMNSNVSSLYNTSVQNDNALPQMSATALLQKAAQMGSTTSANSAT 913
            G+E   LF  NI+GD ++S V SL++TS+QN+NA+  MSATALLQKAAQMGST+S NSA+
Sbjct: 375  GSERNNLFPSNIIGDQISSGVPSLFSTSLQNENAVSHMSATALLQKAAQMGSTSSNNSAS 434

Query: 912  LLRGFGXXXXXSARSDRPQMSANFRGSFTGGSSGENLRSQIENENHLQDLMNSLANGNSP 733
            LLRGF      +A+SDRP +  NF G F             ENE+HLQDLMNSL  G+S 
Sbjct: 435  LLRGFAGSSSANAKSDRPLVGPNFGGVFG------------ENESHLQDLMNSLGGGSSS 482

Query: 732  IFXXXXXXXXXXXXXGQETSFTGFNTNRLSLDQQHSNSNLH-------NMDETKMHQNLT 574
            IF               E ++ GFN NR +L+QQ      H       N+DE K+HQNLT
Sbjct: 483  IFGGGSGGVNAYSGHENENTYGGFNANRSTLEQQQQQQQQHRHGPNFCNIDEIKLHQNLT 542

Query: 573  VSIGGSDRLTRDFL 532
             ++GGSDRLTRDFL
Sbjct: 543  ANMGGSDRLTRDFL 556



 Score =  206 bits (524), Expect(2) = e-165
 Identities = 94/100 (94%), Positives = 97/100 (97%)
 Frame = -3

Query: 2129 NLPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK 1950
            N PGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK
Sbjct: 45   NQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK 104

Query: 1949 EVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEK 1830
            EV+RKVYLCPEP CVHHDP+RALGDLTGIKKH+ RKHGEK
Sbjct: 105  EVRRKVYLCPEPGCVHHDPARALGDLTGIKKHYSRKHGEK 144


>ref|XP_002521877.1| zinc finger protein, putative [Ricinus communis]
            gi|223538915|gb|EEF40513.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 571

 Score =  350 bits (897), Expect(2) = e-146
 Identities = 207/422 (49%), Positives = 258/422 (61%), Gaps = 6/422 (1%)
 Frame = -2

Query: 1797 EKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 1618
            EKKWKC+KCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA
Sbjct: 153  EKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 212

Query: 1617 RLPTGLGTMGSHLYGGSNMTLALSQVGSQMSSLQDQSHSSNDILRLGGAGQNQYDHLIXX 1438
            R PTGL T+GSHLYG ++M+L LSQVGS +SSLQDQ+HSS+++LRLG AG  +++H+I  
Sbjct: 213  RHPTGLNTIGSHLYGNNHMSLGLSQVGSPISSLQDQNHSSSNLLRLGSAGAAKFEHII-- 270

Query: 1437 XXXXXXXXXXXXXSAFFLQGPSNQDFHEDSQSHHGLMQNKNFHGLMQLPELQXXXXXXXX 1258
                         SAFF+           S ++ G   NK  HGLMQLP+LQ        
Sbjct: 271  PPSNSTSLPTMPASAFFM-----------SDANQGSFSNKPLHGLMQLPDLQ-----SAT 314

Query: 1257 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLLMPDQFNGGNAGTEGT 1078
                                                    ++G L P+ FNGGN G +G+
Sbjct: 315  NNSSVATNLFNLSFFSNNSPGNRISNSDNGNSSTAATNLVNSGFLSPNPFNGGNGG-QGS 373

Query: 1077 TLFSGNIMGDHMNSNVSSLYNTSVQNDNALPQMSATALLQKAAQMGSTTSA-NSATLLRG 901
            T+F+ N MGD + S + SLY+ S+Q +N  P MSATALLQKAAQMGSTTS+ N++TLLRG
Sbjct: 374  TIFANN-MGDPVGSGIPSLYSNSMQQENITPHMSATALLQKAAQMGSTTSSNNNSTLLRG 432

Query: 900  FGXXXXXSARSDR-PQMSANFRGSFTGGSSGEN----LRSQIENENHLQDLMNSLANGNS 736
             G       +SDR P +SANF  SF     G++    L +QIE+EN LQ LMNSLANG S
Sbjct: 433  LGSSSSTGNKSDRSPLVSANFGSSFGNAKIGDHHHQGLGTQIESENQLQGLMNSLANGGS 492

Query: 735  PIFXXXXXXXXXXXXXGQETSFTGFNTNRLSLDQQHSNSNLHNMDETKMHQNLTVSIGGS 556
             IF             GQ+  F GF ++ +SL+Q H++++  N+DE        + +GG 
Sbjct: 493  SIF---------GGGHGQDNGFGGFTSSGISLEQPHNSTSFSNVDEANKLTLDFLGVGGM 543

Query: 555  DR 550
             R
Sbjct: 544  VR 545



 Score =  198 bits (504), Expect(2) = e-146
 Identities = 95/109 (87%), Positives = 97/109 (88%), Gaps = 9/109 (8%)
 Frame = -3

Query: 2129 NLPGTP---------NPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLP 1977
            N PGTP         +PDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLP
Sbjct: 46   NQPGTPCNFWHFPFADPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLP 105

Query: 1976 WKLKQKTTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEK 1830
            WKLKQKTTKEVKRKVYLCPEPTCVHHD SRALGDLTGIKKH+ RKHGEK
Sbjct: 106  WKLKQKTTKEVKRKVYLCPEPTCVHHDASRALGDLTGIKKHYSRKHGEK 154


>ref|XP_002521878.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538916|gb|EEF40514.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 589

 Score =  333 bits (855), Expect(2) = e-145
 Identities = 219/454 (48%), Positives = 261/454 (57%), Gaps = 14/454 (3%)
 Frame = -2

Query: 1797 EKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 1618
            EKKWKC+KCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA
Sbjct: 145  EKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 204

Query: 1617 R-LPTGLGTMGSHLYGGSNMTLALSQVGSQMSSLQDQSHSSNDILRLGGAGQ-NQYDHLI 1444
            R  PT L T+GSHLYGGSNM+L LSQV +Q+SS+QDQ   S+DILRLGG  +  Q+DHL+
Sbjct: 205  RNPPTNLNTIGSHLYGGSNMSLGLSQVNTQISSMQDQ---SSDILRLGGGSRTGQFDHLL 261

Query: 1443 -----XXXXXXXXXXXXXXXSAFFLQGPSNQDFHEDSQSHHGLMQNKNF-HGLMQLPELQ 1282
                                 AFF+Q P NQ++H++ Q+  GL+QNK F HGLMQ  EL 
Sbjct: 262  PSSMGGSVSFRPSPPQPMPSPAFFMQEP-NQNYHDEHQAQQGLLQNKPFHHGLMQFAELH 320

Query: 1281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLLMPDQF-- 1108
                                                            +  LLM +QF  
Sbjct: 321  ------------NTTNTNPPASNIFNLSFLSNSSTTSSITNSNNANNSNNSLLMSNQFSN 368

Query: 1107 -NGGNAGTEGTTLFSGNIMGDH--MNSNVSSLYNTSVQNDNALPQMSATALLQKAAQMGS 937
             NG + G +G+T+FS +IMGDH  MNS V SL+ +SVQ DN +P MSATALLQKAAQMGS
Sbjct: 369  QNGASGGGDGSTMFSNHIMGDHHQMNSGVPSLFTSSVQKDNTVPHMSATALLQKAAQMGS 428

Query: 936  TTSANSATLLRGFGXXXXXSARSDRPQMSANFRGSFTGGSSGENLRSQIENENHLQDLMN 757
            T+S  SA+LLR FG     S+ +     +ANF   F+     EN      ++N+L DLMN
Sbjct: 429  TSSTYSASLLRSFG---SSSSSTGMKSAAANFGEIFS-----EN------DQNNLHDLMN 474

Query: 756  SL-ANGNSPIFXXXXXXXXXXXXXGQETSFTGFNTNRLSLDQQHSNSNLHNMDETKMHQN 580
            S  A GNS IF             GQE  +                ++  N++E KMHQ 
Sbjct: 475  SFAATGNSSIF-----------GHGQENPY---------------GTSGGNLEEAKMHQG 508

Query: 579  LTVSIGGSDRLTRDFLXXXXXXXXXXXXXSQREQ 478
            L  SIGGSDRLTRDFL             SQRE+
Sbjct: 509  LNASIGGSDRLTRDFLGVGQVVRSMSGGFSQREK 542



 Score =  209 bits (531), Expect(2) = e-145
 Identities = 96/100 (96%), Positives = 97/100 (97%)
 Frame = -3

Query: 2129 NLPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK 1950
            N PG PNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK
Sbjct: 47   NQPGMPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK 106

Query: 1949 EVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEK 1830
            EVKRKVYLCPEPTCVHHDPSRALGDLTGIKKH+ RKHGEK
Sbjct: 107  EVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEK 146


>ref|XP_003555448.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]
          Length = 560

 Score =  276 bits (707), Expect(2) = e-124
 Identities = 195/485 (40%), Positives = 253/485 (52%), Gaps = 23/485 (4%)
 Frame = -2

Query: 1797 EKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 1618
            EKKWKC+KCSK+YAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA
Sbjct: 140  EKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESA 199

Query: 1617 RLPTGLGTMGSHLYGGSNMT-LALSQVGSQMSSL--QDQSHSSNDILRLG---GAGQNQY 1456
            R P+GL ++G+HL+G ++ T L+LSQVG+Q+S +  Q+Q+ ++N I  LG   GA   ++
Sbjct: 200  RFPSGLNSLGTHLFGTNHTTSLSLSQVGNQLSQVQKQNQTATTNSIFLLGNNVGAAATKF 259

Query: 1455 DHLI--XXXXXXXXXXXXXXXSAFFLQGPSNQDFHEDSQSHHG-LMQNKNFHGLMQLPEL 1285
            +HLI                 SAFF+   +NQ   E+  S HG L   K   GLMQL +L
Sbjct: 260  EHLIPPLNQSSFGHSPQSMPSSAFFMNNNTNQSLFEEHHSQHGPLFSTKQLQGLMQLQDL 319

Query: 1284 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLLMPDQFN 1105
            Q                                                STG ++PDQFN
Sbjct: 320  Q------------------GNTNNSDSSSVAAPNNSNLFNLSFFPSSNISTGTIIPDQFN 361

Query: 1104 ---GGNAGTEGTTLFSG----NIMGDHMNSNVSSLYNTSVQNDNALPQMSATALLQKAAQ 946
               GG+ GT  TT   G    N+   H+ S+ SS++  S++N ++ P MSATALLQ+AAQ
Sbjct: 362  NISGGDQGTTTTTTLYGNSIENVSSPHVGSSFSSIFGNSMENVSS-PHMSATALLQQAAQ 420

Query: 945  MGS--TTSANSATLLRGFGXXXXXSARSDRPQMSANFRGSFTGGSSGENLRSQIENENHL 772
            MGS  TT+ N ++LLRG               M  N       G   EN     ++ ++L
Sbjct: 421  MGSTTTTTTNCSSLLRG---------------MCTN------NGCKAEN-----DHHHNL 454

Query: 771  QDLMNSLANGNSPIFXXXXXXXXXXXXXGQETSFTGFNTNRLSLDQQHSNSNLHNMDET- 595
            Q LMNS+ANGN+ +F             G E +  GF                HN+DE+ 
Sbjct: 455  QGLMNSIANGNTSLF---------GSMQGNENNLCGF----------------HNVDESN 489

Query: 594  -KMHQNLTVSIGGSDRLTRDFL---XXXXXXXXXXXXXSQREQHHGXXXXXXXXXIKSAA 427
             K+ QNL+V+ GGSD+LT DFL                 +++QH           +KSA 
Sbjct: 490  NKLPQNLSVNFGGSDKLTLDFLGVGGMMRNMSSGGFSQREQQQHDIGTMSSLDHDLKSAQ 549

Query: 426  ENRSF 412
             NR F
Sbjct: 550  PNRHF 554



 Score =  199 bits (505), Expect(2) = e-124
 Identities = 94/101 (93%), Positives = 95/101 (94%), Gaps = 1/101 (0%)
 Frame = -3

Query: 2129 NLPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQK-TT 1953
            N PGTP PDAEVI LSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQK TT
Sbjct: 41   NQPGTPYPDAEVIKLSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTT 100

Query: 1952 KEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEK 1830
            KE KRKVYLCPEPTCVHHDPSRALGDLTGIKKH+ RKHGEK
Sbjct: 101  KEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEK 141


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