BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005074
         (2860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...  1002   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]  1002   0.0  
ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|2...   969   0.0  
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   921   0.0  
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   909   0.0  

>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score = 1002 bits (2590), Expect = 0.0
 Identities = 551/894 (61%), Positives = 641/894 (71%), Gaps = 31/894 (3%)
 Frame = +3

Query: 90   MSLVPTCQIYPT--AFFDSFSKFHGARVQLLRYGSSTHSNKFNFYVTHNSFTSNNVPDDK 263
            M+L+P+ Q YPT  +F DSF   H  R+Q  RYGSS      + YV  N+  SN+     
Sbjct: 1    MALLPSRQFYPTTTSFLDSF---HSTRLQFFRYGSSNRFRTHSSYVARNTIASNSTN--- 54

Query: 264  YPQPNSNIV----PKS------------NWIDKWNNAPYSKLPKRPQALVDYRNGGVXXX 395
             PQ  SNIV    P S            NWIDKWN       PK  + +++YRN      
Sbjct: 55   -PQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKESRPVMNYRNSETVSR 113

Query: 396  XXXXXXXXXXXXXXXMDRIVEKLKKFGYVEEVREKKA----RLPEKGSVEDIFYVEEGML 563
                           M++IVEKLKKFGY+++V+E K     R+ EKGS+EDIFY+EEG+L
Sbjct: 114  SDGGSGGGST-----MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEGIL 168

Query: 564  PNSRGGYSENSPLGDDSGFGNDGEVCFPWEKPLVKKDEERFSVRQKSKTNLAELTLPESE 743
            PN +GG+S +SPLG ++    +GEV FPWE+P V    E  SVR KS+T+LAELTLPESE
Sbjct: 169  PNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKV----EEGSVRIKSRTSLAELTLPESE 224

Query: 744  LRRLRQLAXXXXXXXXXXXXXXXNAVVEVIHEKWKTSEVVRLKCEGAPALNMKRMHEILE 923
            LRRLR L                 AVV++I EKWKTSE+V+LKCEGA ALNM+R+HEILE
Sbjct: 225  LRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILE 284

Query: 924  RRTGGLVIWRSGTSVCLYRGVSYELPSMKQAKKHILEKNGGSYT-----TPKDKISKVPT 1088
            R+TGGLVIWRSGTSV LYRGVSYE+P   Q  K + +KN  S++     TP         
Sbjct: 285  RKTGGLVIWRSGTSVSLYRGVSYEVPV--QLNKRVYKKNETSHSSFSSITPNSFAISSNK 342

Query: 1089 TQNNN---GEPQVAQGSMETM-VKETNEAQSEPEVHYETEIDKLLDGLGPRYTDWPGGDP 1256
            T  N    G  Q    S  T+ + +     +E EV YE EIDKLLDGLGPRYTDWPG DP
Sbjct: 343  TSGNAPAVGSNQNVHASQATLNITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPGCDP 402

Query: 1257 LPVDADLLPGIILGFKPPFRILPYGVRSTLGIKETTALRRLSRGLPPHFALGRSRQHQGL 1436
            LP+DADLLPG I G++PPFRILPYGVRS+LG+KE TALRRL+R LPPHFALGRSRQ +GL
Sbjct: 403  LPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGL 462

Query: 1437 AIAMVKLWESSSIAKVALKRGVQLTASERMAEDIKKLTGGKILSRNKDFIVFYRGKDFLS 1616
            A+AM+KLWE SSIAKVALKRGVQLT SERMAEDIKKLTGG +LSRNKDF+VFYRGK+FLS
Sbjct: 463  AMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLS 522

Query: 1617 PDVTEVLLERERLAKTLQDDEEQARLRASSSFISSVEQTEDSGIAGSLGETLEADARWGK 1796
             DVTE LLERERLAK LQD+EEQARLRAS+    +V  TE  G AG+LGETLEADARWGK
Sbjct: 523  SDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGK 582

Query: 1797 RLNNDDKDNLLRAAEVARHASLVRKLEHKLTYAERKLRKAEGALAKVEVFLKPVERPPDP 1976
            RL++ DK  +L+ AEVARHA+LVRKLE +L  AERKL KAE AL+KVE FLKP  RP DP
Sbjct: 583  RLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADP 642

Query: 1977 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVMVKAKTFDQVR 2156
            ESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVK++VKAKTFDQV+
Sbjct: 643  ESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVK 702

Query: 2157 NIALALEAESGGMLVSVDKVSKGFAIVVYRGRDYQRPRLLRPKNLLTKRKALARSIELQR 2336
              ALALE+ESGG+LVSVDKVSKGFAIVV+RG+DYQRP  LRPKNLLTKRKALARSIELQR
Sbjct: 703  KTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQR 762

Query: 2337 REALSSHVSVLQRRVELLRSELDQMETVKDQGDEELYAKLDSAYXXXXXXXXXXXXXAYL 2516
            REAL +H+S LQR VE LRSE++QM+ VKD GDEELY KLDSAY             AYL
Sbjct: 763  REALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYATEDEHTEEEGDEAYL 822

Query: 2517 ETFDSENEGDTEENADSDNSIIDSHFPPNFPYDDQQESHDTDFDASNSYASVEP 2678
            ET+  EN+G+ E    SDNSI + H   NFPYD Q E  +T+    +  +  EP
Sbjct: 823  ETYADENDGEHE----SDNSIHNHHIETNFPYDIQGEEFETEAAVQDEESETEP 872


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score = 1002 bits (2590), Expect = 0.0
 Identities = 551/894 (61%), Positives = 641/894 (71%), Gaps = 31/894 (3%)
 Frame = +3

Query: 90   MSLVPTCQIYPT--AFFDSFSKFHGARVQLLRYGSSTHSNKFNFYVTHNSFTSNNVPDDK 263
            M+L+P+ Q YPT  +F DSF   H  R+Q  RYGSS      + YVT N+  SN+     
Sbjct: 1    MALLPSRQFYPTTTSFLDSF---HSTRLQFFRYGSSNRFRTHSSYVTRNTIASNSTN--- 54

Query: 264  YPQPNSNIV----PKS------------NWIDKWNNAPYSKLPKRPQALVDYRNGGVXXX 395
             PQ  SNIV    P S            NWIDKWN       PK  + +++YRN      
Sbjct: 55   -PQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRNSETVSR 113

Query: 396  XXXXXXXXXXXXXXXMDRIVEKLKKFGYVEEVREKKA----RLPEKGSVEDIFYVEEGML 563
                           M++IVEKLKKFGY+++V+E K     R+ EKGS+EDIFY+EEG+L
Sbjct: 114  SDGGSGGGST-----MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEGIL 168

Query: 564  PNSRGGYSENSPLGDDSGFGNDGEVCFPWEKPLVKKDEERFSVRQKSKTNLAELTLPESE 743
            PN +GG+S +SPLG ++    +GEV FPWE+P V    E  SVR KS+T+LAELTLPESE
Sbjct: 169  PNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKV----EEGSVRIKSRTSLAELTLPESE 224

Query: 744  LRRLRQLAXXXXXXXXXXXXXXXNAVVEVIHEKWKTSEVVRLKCEGAPALNMKRMHEILE 923
            LRRLR L                 AVV++I EKWKTSE+V+LKCEGA ALNM+R+HEILE
Sbjct: 225  LRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILE 284

Query: 924  RRTGGLVIWRSGTSVCLYRGVSYELPSMKQAKKHILEKNGGSYT-----TPKDKISKVPT 1088
            R+TGGLVIWRSGTSV LYRGVSYE+P   Q  K + +KN  S++     TP         
Sbjct: 285  RKTGGLVIWRSGTSVSLYRGVSYEVPV--QLNKRVYKKNETSHSSFSSITPNSFAISSNK 342

Query: 1089 TQNNN---GEPQVAQGSMETM-VKETNEAQSEPEVHYETEIDKLLDGLGPRYTDWPGGDP 1256
            T  N    G  Q    S  T+ + +     +E EV YE EIDKLLDGLGPRYTDWP  DP
Sbjct: 343  TSGNAPAVGSNQNVHASQATLXITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPXCDP 402

Query: 1257 LPVDADLLPGIILGFKPPFRILPYGVRSTLGIKETTALRRLSRGLPPHFALGRSRQHQGL 1436
            LP+DADLLPG I G++PPFRILPYGVRS+LG+KE TALRRL+R LPPHFALGRSRQ +GL
Sbjct: 403  LPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGL 462

Query: 1437 AIAMVKLWESSSIAKVALKRGVQLTASERMAEDIKKLTGGKILSRNKDFIVFYRGKDFLS 1616
            A+AM+KLWE SSIAKVALKRGVQLT SERMAEDIKKLTGG +LSRNKDF+VFYRGK+FLS
Sbjct: 463  AMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLS 522

Query: 1617 PDVTEVLLERERLAKTLQDDEEQARLRASSSFISSVEQTEDSGIAGSLGETLEADARWGK 1796
             DVTE LLERERLAK LQD+EEQARLRAS+    +V  TE  G AG+LGETLEADARWGK
Sbjct: 523  SDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGK 582

Query: 1797 RLNNDDKDNLLRAAEVARHASLVRKLEHKLTYAERKLRKAEGALAKVEVFLKPVERPPDP 1976
            RL++ DK  +L+ AEVARHA+LVRKLE +L  AERKL KAE AL+KVE FLKP  RP DP
Sbjct: 583  RLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADP 642

Query: 1977 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVMVKAKTFDQVR 2156
            ESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYRELVK++VKAKTFDQV+
Sbjct: 643  ESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVK 702

Query: 2157 NIALALEAESGGMLVSVDKVSKGFAIVVYRGRDYQRPRLLRPKNLLTKRKALARSIELQR 2336
              ALALE+ESGG+LVSVDKVSKGFAIVV+RG+DYQRP  LRPKNLLTKRKALARSIELQR
Sbjct: 703  KTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQR 762

Query: 2337 REALSSHVSVLQRRVELLRSELDQMETVKDQGDEELYAKLDSAYXXXXXXXXXXXXXAYL 2516
            REAL +H+S LQR VE LRSE++QM+ VKD GDEELY KLDSAY             AYL
Sbjct: 763  REALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYATEDEHTEEEGDEAYL 822

Query: 2517 ETFDSENEGDTEENADSDNSIIDSHFPPNFPYDDQQESHDTDFDASNSYASVEP 2678
            ET+  EN+G+ E    SDNSI + H   NFPYD Q E  +T+    +  +  EP
Sbjct: 823  ETYADENDGEHE----SDNSIHNHHIETNFPYDIQDEEFETEAAVQDEESETEP 872


>ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|222864769|gb|EEF01900.1|
            predicted protein [Populus trichocarpa]
          Length = 894

 Score =  969 bits (2505), Expect = 0.0
 Identities = 514/867 (59%), Positives = 638/867 (73%), Gaps = 16/867 (1%)
 Frame = +3

Query: 90   MSLVPTCQIYPTAFFDSFSKFHGARVQLLRYGSS----THSNKFNFYVTHNSFT-SNNVP 254
            M+LVP+ Q+Y  +F  SFSKFHG  +Q  RY SS    +HS         N  T S + P
Sbjct: 1    MALVPSRQLYIDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGYACSITDKNPSTKSTSFP 60

Query: 255  DDKYPQPNSNIVPKSNWIDKWNNAPYSKLPKRPQALVDYRNGGVXXXXXXXXXXXXXXXX 434
             DK      N+   S+W   WN      LP+ PQA+ DYR+                   
Sbjct: 61   TDK--SKTLNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNN----------SNSSGSG 108

Query: 435  XXMDRIVEKLKKFGYVE-EVREKKARLPE----KGSVEDIFYVEEGMLPNSRGGYSENSP 599
              M++IVEKLKK GY++ +V E K R+ E    KGSVEDIFYVEEGMLPN+RGG+S+ SP
Sbjct: 109  STMEKIVEKLKKHGYMDGDVNENKERMQERVIEKGSVEDIFYVEEGMLPNARGGFSKESP 168

Query: 600  LGDDSGFGNDGEVCFPWEKPLVKKDEERFSVRQKSKTNLAELTLPESELRRLRQLAXXXX 779
            LG +  F +DGEV FPWEKP  ++DE +++ R KS+T+LAELTLPESELRRLR L     
Sbjct: 169  LGVEDVFRSDGEVRFPWEKPKKEEDEGKWTARSKSRTSLAELTLPESELRRLRNLTYGTK 228

Query: 780  XXXXXXXXXXXNAVVEVIHEKWKTSEVVRLKCEGAPALNMKRMHEILERRTGGLVIWRSG 959
                         VV+ IH+KWKTSE+ R+K EGAPALNMKRMHEILE +TGGLVIWRSG
Sbjct: 229  SKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNMKRMHEILENKTGGLVIWRSG 288

Query: 960  TSVCLYRGVSYELPSMKQAKKHILEKNGGSYTTPKDKISKVPTTQNNNGEPQVAQGSMET 1139
             +V LYRGVSYE P++K  K+   +K   S + P      + +   N+ + ++     +T
Sbjct: 289  ATVSLYRGVSYEDPALKWKKRIFKKKETSSNSLPAATSITIGSQSKNSPDNEIHAPRPKT 348

Query: 1140 MVK----ETNEAQSEPEVHYETEIDKLLDGLGPRYTDWPGGDPLPVDADLLPGIILGFKP 1307
             +        E +++ +V YE E+DKLLDGLGPRYTDWPG DPLPVDAD+LPG+I G++P
Sbjct: 349  EINVEAANQKETKTQTDVKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQP 408

Query: 1308 PFRILPYGVRSTLGIKETTALRRLSRGLPPHFALGRSRQHQGLAIAMVKLWESSSIAKVA 1487
            PFRILPYGVR TLG +++T+LRRL+R LPPHFA+GRSRQ QGLA+AM+KLWE SSI KVA
Sbjct: 409  PFRILPYGVRPTLGRQDSTSLRRLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIVKVA 468

Query: 1488 LKRGVQLTASERMAEDIKKLTGGKILSRNKDFIVFYRGKDFLSPDVTEVLLERERLAKTL 1667
            LKRGVQLT SERMAEDIKKLTGG +LSRNKDF+VFYRGKDFLSP+V+E LLERERLAK+L
Sbjct: 469  LKRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVSEALLERERLAKSL 528

Query: 1668 QDDEEQARLRASSSFISSVEQTEDSGIAGSLGETLEADARWGKRLNNDDKDNLLRAAEVA 1847
            QD+EEQARLRAS+  I S E  E+SGIAGSL ETL+ADA+WGKRL++  K+ ++R AE+ 
Sbjct: 529  QDEEEQARLRASALVIPSDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIV 588

Query: 1848 RHASLVRKLEHKLTYAERKLRKAEGALAKVEVFLKPVERPPDPESITDEERFMFRKLGLR 2027
            RHAS+VR+LE KL +A+RKLR+AE  L KVE FLKP ER  DPESITDEERFMFRKLGLR
Sbjct: 589  RHASIVRRLEKKLAFAQRKLRRAERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLR 648

Query: 2028 MKAFLLLGRRGVFDGTVENMHLHWKYRELVKVMVKAKTFDQVRNIALALEAESGGMLVSV 2207
            MKAFLLLGRRGVFDGTVENMHLHWKYRELVK+++KAK+F+QV+ IALALEAESGG+LVSV
Sbjct: 649  MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSV 708

Query: 2208 DKVSKGFAIVVYRGRDYQRPRLLRPKNLLTKRKALARSIELQRREALSSHVSVLQRRVEL 2387
            DK+SKG+AI+VYRG+DYQRP +LRPKNLLTKRKALARSIE+QR EAL +HVS L+ +VE 
Sbjct: 709  DKISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEK 768

Query: 2388 LRSELDQMETVKDQGDEELYAKLDSAY--XXXXXXXXXXXXXAYLETFDSENEGDTEENA 2561
            +RSE++QM  VKD+GDEELY +LDSAY               AYLET++SEN+ D ++  
Sbjct: 769  IRSEIEQMGFVKDKGDEELYDRLDSAYLTDDDADDSEDEGDEAYLETYNSENDVDYDD-- 826

Query: 2562 DSDNSIIDSHFPPNFPYDDQQESHDTD 2642
            ++D+++ ++H   N   + Q +  +T+
Sbjct: 827  ETDSTVHNAHLDTNLLNNVQIQESETE 853


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 835

 Score =  921 bits (2381), Expect = 0.0
 Identities = 503/844 (59%), Positives = 603/844 (71%), Gaps = 16/844 (1%)
 Frame = +3

Query: 90   MSLVPTCQIYPTAFFDSFSK---FHGARV--QLLRYGSSTHSNKFNFYVTHNSFTSNNVP 254
            M+LVPT       FFDSF     FH  R    L R+ S T S    F      F      
Sbjct: 1    MALVPT-----RPFFDSFHSSPNFHSLRFCNSLFRH-SLTPSPNSTFLRRKPLFIFRC-- 52

Query: 255  DDKYPQPNSNIVPKSNWIDKWNNAPYSKL-PKRPQALVDYRNGG----VXXXXXXXXXXX 419
                  P  +     +W+ +WN+   +   PK P A++DY   G                
Sbjct: 53   -----NPAKSFSTDKHWLKRWNDPTNNHARPKPPCAVLDYSENGHASKSGLASSDEEGGD 107

Query: 420  XXXXXXXMDRIVEKLKKFGYVEEVREKKARLPEKGSVEDIFYVEEGMLPNSRGGYSENSP 599
                   MDRIVEKLKKFGYVE+  + K R+ EKGSVEDIFYVEEGMLPNSRGG+S  SP
Sbjct: 108  GNTGGSTMDRIVEKLKKFGYVEDGIQNKERVIEKGSVEDIFYVEEGMLPNSRGGFSSESP 167

Query: 600  LGDDSGFGNDGEVCFPWEKPLVKKDEERFSVRQKSKTNLAELTLPESELRRLRQLAXXXX 779
            LG  S   +D EV FPWEKP+V++ EER S+R +SKT+LAELTLPESEL+RL +L     
Sbjct: 168  LGFGSFGSDDREVRFPWEKPVVEELEERKSMRSRSKTSLAELTLPESELKRLLKLTFEKK 227

Query: 780  XXXXXXXXXXXNAVVEVIHEKWKTSEVVRLKCEGAPALNMKRMHEILERRTGGLVIWRSG 959
                        AVV+ IHE+WKTSE+VRLK EG  ALNMKRMHEILER+TGGLVIWRSG
Sbjct: 228  HKTRIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSG 287

Query: 960  TSVCLYRGVSYELPSMKQAKKHILEKNGGSYTTPKDKISKV--PTTQNNNGEPQVAQGSM 1133
             SV LYRGVSYE+PS++Q KK   +    S   P    + V  P+   +N         +
Sbjct: 288  NSVSLYRGVSYEVPSVQQNKKIYRKSENSSKLLPTPSYNSVGNPSDIASNSGTSAPLAKL 347

Query: 1134 ETMVKETNEAQSEPEVHYETEIDKLLDGLGPRYTDWPGGDPLPVDADLLPGIILGFKPPF 1313
            E+   +  E    P+V+YE E+DKLLDGLGPRYTDWPG DPLPVDAD+LP  + G++PPF
Sbjct: 348  ES-TNDEKERDYLPKVNYEHEVDKLLDGLGPRYTDWPGCDPLPVDADMLPVTVPGYQPPF 406

Query: 1314 RILPYGVRSTLGIKETTALRRLSRGLPPHFALGRSRQHQGLAIAMVKLWESSSIAKVALK 1493
            R+LP+GVR+TLG++E TALRR++R LPPHFALGR+RQ QGLA+AM+KLWE SSIAKVALK
Sbjct: 407  RVLPFGVRATLGLREATALRRIARTLPPHFALGRNRQLQGLAVAMIKLWEISSIAKVALK 466

Query: 1494 RGVQLTASERMAEDIKKLTGGKILSRNKDFIVFYRGKDFLSPDVTEVLLERERLAKTLQD 1673
            RGVQLT SERMAE+IKKLTGG +LSRNKDF+VF+RGK+FLS DVT+ LLERER+AK +QD
Sbjct: 467  RGVQLTTSERMAEEIKKLTGGILLSRNKDFLVFFRGKNFLSADVTQALLERERMAKVMQD 526

Query: 1674 DEEQARLRASSSFISSVEQTEDSGIAGSLGETLEADARWGKRLNNDDKDNLLRAAEVARH 1853
            +EEQARLRASS  I +   +E S  AG+LGETL+ADA+WGK L+   K  ++R  E  RH
Sbjct: 527  EEEQARLRASSLLIPTNNTSELSAEAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRH 586

Query: 1854 ASLVRKLEHKLTYAERKLRKAEGALAKVEVFLKPVERPPDPESITDEERFMFRKLGLRMK 2033
            A+LV+KLE KL++AERKLR+AE AL KVE FLKP E   DPESITDEERFMFRKLGLRMK
Sbjct: 587  ANLVKKLEQKLSFAERKLRRAEKALMKVESFLKPSEYKADPESITDEERFMFRKLGLRMK 646

Query: 2034 AFLLLGRRGVFDGTVENMHLHWKYRELVKVMVKAKTFDQVRNIALALEAESGGMLVSVDK 2213
            AFLLLGRRGVFDGT+ENMHLHWKYRELVK++VKAKTF+QV+ IALALEAESGG+LVSVDK
Sbjct: 647  AFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKAKTFEQVKKIALALEAESGGVLVSVDK 706

Query: 2214 VSKGFAIVVYRGRDYQRPRLLRPKNLLTKRKALARSIELQRREALSSHVSVLQRRVELLR 2393
            VSKG++++VYRG+DYQRP  LRPKNLLTKRKALARSIELQR EAL +H+S LQ +V  +R
Sbjct: 707  VSKGYSVIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIR 766

Query: 2394 SELDQMETVKDQGDEELYAKLDSAY----XXXXXXXXXXXXXAYLETFDSENEGDTEENA 2561
            SE++QME VKD+GDE LY KLDSAY                 AYL+T++SEN+ + E   
Sbjct: 767  SEIEQMEKVKDKGDEALYDKLDSAYPSDDENSEVEDGEQGDEAYLKTYNSENDSEIESEV 826

Query: 2562 DSDN 2573
            +SDN
Sbjct: 827  ESDN 830


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  909 bits (2349), Expect = 0.0
 Identities = 498/862 (57%), Positives = 614/862 (71%), Gaps = 30/862 (3%)
 Frame = +3

Query: 90   MSLVPTCQIYPTAFFDSF-SKFHGARVQLLRYGSST----HSNKFNFYVTHNSFTSNNVP 254
            M+L+ +   + T FFD+F ++FH + + LL+YGSS      S   +FY       SN + 
Sbjct: 1    MALLHSRLCHATNFFDTFQTEFHSSHI-LLKYGSSVVFRNRSFCSSFYGLTTDTFSNGIS 59

Query: 255  ----DDKYPQPNSNI---VPKSNWIDKWNNAPYSKLPKRPQALVDYRN-----------G 380
                  + P    N+   + + +WID+WN       PK P+A++DY +           G
Sbjct: 60   YGSLSSRTPVYRYNLRRNLSRVSWIDRWNETAKRNRPKPPRAVLDYPSSDENEVSISSTG 119

Query: 381  GVXXXXXXXXXXXXXXXXXXMDRIVEKLKKFGYVEEVREKKA--RLPEKGSVEDIFYVEE 554
                                M++IV KLKKFGY+++  ++K   R  EKGSVEDI Y+EE
Sbjct: 120  FSKSYRASSRIDDDGRGGSTMEKIVRKLKKFGYIDDENKEKGEERAIEKGSVEDILYIEE 179

Query: 555  GMLPNSRGGYSENSPLGDDSGFGNDGEVCFPWEKPLVKKDEERFSVRQKSKTNLAELTLP 734
            GMLPN+RGG+S+ SP+GD++ FG+DGEV FPWEKP  K+D    S R+ S  +LA+LTLP
Sbjct: 180  GMLPNTRGGFSKESPMGDENMFGSDGEVRFPWEKPKEKEDTHGDSTRRGS-ASLAQLTLP 238

Query: 735  ESELRRLRQLAXXXXXXXXXXXXXXXNAVVEVIHEKWKTSEVVRLKCEGAPALNMKRMHE 914
            E ELRRLR L                 AVV+VIHEKWK+SE+VRLK  G PALNMKRMHE
Sbjct: 239  EPELRRLRNLTFQKRHKMKIGGGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHE 298

Query: 915  ILERRTGGLVIWRSGTSVCLYRGVSYELPSMKQAKKHILEKNGGSYTTPKDKISKVPTTQ 1094
            ILER+TGGLVIWRSGTS+ LYRGVSYELP   Q  K I ++N  +   PK   S +  ++
Sbjct: 299  ILERKTGGLVIWRSGTSLSLYRGVSYELPEAPQFNKRIYKRNEIT-ALPKTGASTIAPSE 357

Query: 1095 NNNGEPQVA--QGSMETMVK--ETNEAQSEPEVHYETEIDKLLDGLGPRYTDWPGGDPLP 1262
            +++     A  Q   ET ++    +E  ++ +V+YE E++KLLDGLGPRYTDWPG DPLP
Sbjct: 358  SSSHRNVYALQQKRAETSIEGEHCSEQLTKVQVNYEDEVNKLLDGLGPRYTDWPGLDPLP 417

Query: 1263 VDADLLPGIILGFKPPFRILPYGVRSTLGIKETTALRRLSRGLPPHFALGRSRQHQGLAI 1442
            VDAD+LPG++  ++PPFRILPYGVRS++G+KE TAL+RL+R LPPHFALGR+RQ QGLAI
Sbjct: 418  VDADMLPGVVPDYEPPFRILPYGVRSSIGVKEATALKRLARRLPPHFALGRNRQLQGLAI 477

Query: 1443 AMVKLWESSSIAKVALKRGVQLTASERMAEDIKKLTGGKILSRNKDFIVFYRGKDFLSPD 1622
            AM KLWE S IAK+ALKRGVQLT SERMAE+IKKLTGG +LSRNKDF+VFYRGK FLSP+
Sbjct: 478  AMTKLWERSLIAKIALKRGVQLTTSERMAEEIKKLTGGMLLSRNKDFLVFYRGKSFLSPE 537

Query: 1623 VTEVLLERERLAKTLQDDEEQARLRASSSFISSVEQTEDSGIAGSLGETLEADARWGKRL 1802
            VTE LLERERLAK+LQD EEQARL+AS+ F+  +E+TE SG AGSL ETL+ADARWGK L
Sbjct: 538  VTEALLERERLAKSLQDKEEQARLKASA-FVVPIEKTEQSGTAGSLEETLDADARWGKAL 596

Query: 1803 NNDDKDNLLRAAEVARHASLVRKLEHKLTYAERKLRKAEGALAKVEVFLKPVERPPDPES 1982
            ++  K+N++R AE  RH  LVRKLE KL +AERKL KAE  LAKVE F+ P +R  +P+S
Sbjct: 597  DDKHKENVMREAEQLRHTDLVRKLERKLAFAERKLVKAERTLAKVEAFMTPAKRQAEPDS 656

Query: 1983 ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVMVKAKTFDQVRNI 2162
            IT+EERFMFRKLGLRMKAFLLLGRR VFDGTVENMHLHWKYRELVK+M+KA +FD V+NI
Sbjct: 657  ITEEERFMFRKLGLRMKAFLLLGRREVFDGTVENMHLHWKYRELVKIMIKANSFDHVKNI 716

Query: 2163 ALALEAESGGMLVSVDKVSKGFAIVVYRGRDYQRPRLLRPKNLLTKRKALARSIELQRRE 2342
            AL LEAESGG+LVS+DKVSKG+AI+VYRG+DY+RP LLRPKNLLTKRKALARSIELQR E
Sbjct: 717  ALQLEAESGGVLVSIDKVSKGYAIIVYRGKDYKRPSLLRPKNLLTKRKALARSIELQRHE 776

Query: 2343 ALSSHVSVLQRRVELLRSELDQMETVKDQGDEELYAKLDSAYXXXXXXXXXXXXXAYLET 2522
            AL  H+S +Q +V  L SE++QME VKDQGDE LY  LDSAY                  
Sbjct: 777  ALLKHISAMQSKVGKLNSEIEQMEKVKDQGDEVLYNTLDSAYPTDN-------------- 822

Query: 2523 FDSENE-GDTEENADSDNSIID 2585
             DSE+E  DT E  D D+ + D
Sbjct: 823  -DSEDENSDTYEAYDQDSDVED 843