BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005067
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   611   e-173
ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   604   e-170
ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arab...   598   e-169
ref|NP_181780.1| DEAD-box ATP-dependent RNA helicase 37 [Arabido...   597   e-168
gb|AAO42134.1| putative DEAD/DEAH box RNA helicase [Arabidopsis ...   596   e-168

>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 622

 Score =  611 bits (1576), Expect = e-173
 Identities = 302/347 (87%), Positives = 324/347 (93%), Gaps = 1/347 (0%)
 Frame = +3

Query: 3    WNDRSGGYNNRR-REVNPFGDDDETNNVEPAFGEKENSGINFDAYEDIPVETSGDNVPPP 179
            WN RSGG++  R REVNPFGDDD   N EPAF E+EN+GINFDAYEDIPVETSGDNVPPP
Sbjct: 105  WNTRSGGWDRGRDREVNPFGDDD---NAEPAFSEQENTGINFDAYEDIPVETSGDNVPPP 161

Query: 180  VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPI 359
            VNTFAEIDLGEALN NIRRCKYVKPTPVQRHAIPISL G+DLMACAQTGSGKTAAFCFPI
Sbjct: 162  VNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLSGKDLMACAQTGSGKTAAFCFPI 221

Query: 360  ISGILNGQYTQKPRGMRTAYPLALILSPTRELSCQIHEEAKKFSYQTGIRVVVAYGGTPV 539
            ISGI+ GQ+ Q+PRG RT YPLALILSPTRELSCQIH+EA+KFSYQTG++VVVAYGG P+
Sbjct: 222  ISGIMTGQFAQRPRGARTVYPLALILSPTRELSCQIHDEARKFSYQTGVKVVVAYGGAPI 281

Query: 540  GEQLAELQRGVDILVATPGRLNDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVE 719
             +QL EL+RGVDILVATPGRL DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVE
Sbjct: 282  NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVE 341

Query: 720  QMDMPPRGIRQTLLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESD 899
            QMDMPP G+RQT+LFSATFPKEIQRLASDFL++YIFLAVGRVGSSTDLIVQRVEFV ESD
Sbjct: 342  QMDMPPPGVRQTMLFSATFPKEIQRLASDFLSSYIFLAVGRVGSSTDLIVQRVEFVHESD 401

Query: 900  KRSHLMDLLHAQRDNGSHGKQALTLVFVETKKGADSLEYWLCSNGFP 1040
            KRSHLMDLLHAQR NG+HGKQ+LTLVFVETKKGADSLE+WLC NGFP
Sbjct: 402  KRSHLMDLLHAQRANGAHGKQSLTLVFVETKKGADSLEHWLCMNGFP 448


>ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 617

 Score =  604 bits (1558), Expect = e-170
 Identities = 297/346 (85%), Positives = 326/346 (94%), Gaps = 1/346 (0%)
 Frame = +3

Query: 6    NDRSGGYNN-RRREVNPFGDDDETNNVEPAFGEKENSGINFDAYEDIPVETSGDNVPPPV 182
            N R+GG++  R REVNPFGDD +   VEP F ++ENSGINFDAYEDIPV+TSGDNVPP V
Sbjct: 97   NTRTGGWDRGREREVNPFGDDVD---VEPPFVQQENSGINFDAYEDIPVDTSGDNVPPAV 153

Query: 183  NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPII 362
            N+F+EIDLG+ALNLNIRRCKYVKPTPVQRHAIPIS+ GRDLMACAQTGSGKTAAFCFPII
Sbjct: 154  NSFSEIDLGDALNLNIRRCKYVKPTPVQRHAIPISIAGRDLMACAQTGSGKTAAFCFPII 213

Query: 363  SGILNGQYTQKPRGMRTAYPLALILSPTRELSCQIHEEAKKFSYQTGIRVVVAYGGTPVG 542
            SGI+ GQY Q+PRG RTAYPLALILSPTRELSCQIH+EAKKFSYQTG+RVVVAYGG P+ 
Sbjct: 214  SGIMKGQYAQRPRGSRTAYPLALILSPTRELSCQIHDEAKKFSYQTGVRVVVAYGGAPIN 273

Query: 543  EQLAELQRGVDILVATPGRLNDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 722
            +QL +L+RGVDILVATPGRL DLLERAR+SLQM++YLALDEADRMLDMGFEPQIR+IVEQ
Sbjct: 274  QQLRDLERGVDILVATPGRLVDLLERARISLQMVQYLALDEADRMLDMGFEPQIRRIVEQ 333

Query: 723  MDMPPRGIRQTLLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDK 902
            MDMPPRG+RQT+LFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDK
Sbjct: 334  MDMPPRGVRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDK 393

Query: 903  RSHLMDLLHAQRDNGSHGKQALTLVFVETKKGADSLEYWLCSNGFP 1040
            RSHLMDLLHAQR+NG+HGKQALTLVFVETKKGAD+LE+WLC NGFP
Sbjct: 394  RSHLMDLLHAQRENGTHGKQALTLVFVETKKGADALEHWLCINGFP 439


>ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arabidopsis lyrata subsp.
            lyrata] gi|297325829|gb|EFH56249.1| hypothetical protein
            ARALYDRAFT_483345 [Arabidopsis lyrata subsp. lyrata]
          Length = 627

 Score =  598 bits (1543), Expect = e-169
 Identities = 294/346 (84%), Positives = 322/346 (93%)
 Frame = +3

Query: 3    WNDRSGGYNNRRREVNPFGDDDETNNVEPAFGEKENSGINFDAYEDIPVETSGDNVPPPV 182
            WN+RSGG++ R REVNPF +DD  +  EPAF E++N+ INFDAYEDIP+ETSGDNVPPPV
Sbjct: 99   WNNRSGGWDRREREVNPFDNDD--SEPEPAFSEQDNTVINFDAYEDIPIETSGDNVPPPV 156

Query: 183  NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPII 362
            NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI L GRDLMACAQTGSGKTAAFCFPII
Sbjct: 157  NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPII 216

Query: 363  SGILNGQYTQKPRGMRTAYPLALILSPTRELSCQIHEEAKKFSYQTGIRVVVAYGGTPVG 542
            SGI+  Q+ Q+PRG RT YPLA+ILSPTREL+ QIH+EAKKFSYQTG++VVVAYGGTP+ 
Sbjct: 217  SGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPIN 276

Query: 543  EQLAELQRGVDILVATPGRLNDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 722
            +QL EL+RGVDILVATPGRLNDLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIVEQ
Sbjct: 277  QQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 336

Query: 723  MDMPPRGIRQTLLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDK 902
            MDMPPRG+RQTLLFSATFP+EIQRLA+DFLANYIFLAVGRVGSSTDLIVQRVEFV +SDK
Sbjct: 337  MDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDK 396

Query: 903  RSHLMDLLHAQRDNGSHGKQALTLVFVETKKGADSLEYWLCSNGFP 1040
            RSHLMDLLHAQR+NG  GKQALTLVFVETK+GADSLE WLC NGFP
Sbjct: 397  RSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFP 442


>ref|NP_181780.1| DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana]
            gi|108861890|sp|Q84W89.2|RH37_ARATH RecName:
            Full=DEAD-box ATP-dependent RNA helicase 37
            gi|4559339|gb|AAD23001.1| putative ATP-dependent RNA
            helicase [Arabidopsis thaliana]
            gi|330255039|gb|AEC10133.1| DEAD-box ATP-dependent RNA
            helicase 37 [Arabidopsis thaliana]
          Length = 633

 Score =  597 bits (1540), Expect = e-168
 Identities = 294/346 (84%), Positives = 322/346 (93%)
 Frame = +3

Query: 3    WNDRSGGYNNRRREVNPFGDDDETNNVEPAFGEKENSGINFDAYEDIPVETSGDNVPPPV 182
            WN+RSGG++ R REVNPF +DD  +  EPAF E++N+ INFDAYEDIP+ETSGDNVPPPV
Sbjct: 101  WNNRSGGWDRREREVNPFENDD--SEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPV 158

Query: 183  NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPII 362
            NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI L GRDLMACAQTGSGKTAAFCFPII
Sbjct: 159  NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPII 218

Query: 363  SGILNGQYTQKPRGMRTAYPLALILSPTRELSCQIHEEAKKFSYQTGIRVVVAYGGTPVG 542
            SGI+  Q+ Q+PRG RT YPLA+ILSPTREL+ QIH+EAKKFSYQTG++VVVAYGGTP+ 
Sbjct: 219  SGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPIN 278

Query: 543  EQLAELQRGVDILVATPGRLNDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 722
            +QL EL+RGVDILVATPGRLNDLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIVEQ
Sbjct: 279  QQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 338

Query: 723  MDMPPRGIRQTLLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDK 902
            MDMPPRG+RQTLLFSATFP+EIQRLA+DFLANYIFLAVGRVGSSTDLIVQRVEFV +SDK
Sbjct: 339  MDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDK 398

Query: 903  RSHLMDLLHAQRDNGSHGKQALTLVFVETKKGADSLEYWLCSNGFP 1040
            RSHLMDLLHAQR+NG  GKQALTLVFVETK+GADSLE WLC NGFP
Sbjct: 399  RSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFP 444


>gb|AAO42134.1| putative DEAD/DEAH box RNA helicase [Arabidopsis thaliana]
          Length = 633

 Score =  596 bits (1537), Expect = e-168
 Identities = 293/346 (84%), Positives = 322/346 (93%)
 Frame = +3

Query: 3    WNDRSGGYNNRRREVNPFGDDDETNNVEPAFGEKENSGINFDAYEDIPVETSGDNVPPPV 182
            WN+RSGG++ R REVNPF +DD  +  EPAF E++N+ INFDAYEDIP+ETSGDNVPPPV
Sbjct: 101  WNNRSGGWDRREREVNPFENDD--SEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPV 158

Query: 183  NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPII 362
            NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI L GRDLMACAQTGSGKTAAFCFPII
Sbjct: 159  NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPII 218

Query: 363  SGILNGQYTQKPRGMRTAYPLALILSPTRELSCQIHEEAKKFSYQTGIRVVVAYGGTPVG 542
            SGI+  Q+ Q+PRG RT YPLA+ILSPTREL+ QIH+EAK+FSYQTG++VVVAYGGTP+ 
Sbjct: 219  SGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKRFSYQTGVKVVVAYGGTPIN 278

Query: 543  EQLAELQRGVDILVATPGRLNDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 722
            +QL EL+RGVDILVATPGRLNDLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIVEQ
Sbjct: 279  QQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQ 338

Query: 723  MDMPPRGIRQTLLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDK 902
            MDMPPRG+RQTLLFSATFP+EIQRLA+DFLANYIFLAVGRVGSSTDLIVQRVEFV +SDK
Sbjct: 339  MDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDK 398

Query: 903  RSHLMDLLHAQRDNGSHGKQALTLVFVETKKGADSLEYWLCSNGFP 1040
            RSHLMDLLHAQR+NG  GKQALTLVFVETK+GADSLE WLC NGFP
Sbjct: 399  RSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFP 444